ORF » Species Summary » Medicago truncatula » MTR_4g104790 cDNA ORF clone

MTR_4g104790 cDNA ORF clone, Medicago truncatula(barrel medic)

The following MTR_4g104790 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MTR_4g104790 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMe262963 XM_013602283.2
Latest version!		 Medicago truncatula pentatricopeptide repeat-containing protein At3g48250, chloroplastic (LOC25493705), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OMe189829 XM_013602283.1
Latest version!		 Medicago truncatula PPR containing plant protein mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    MTR_4g104790 ( XM_013602283.2 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_013457737.2 Medicago truncatula pentatricopeptide repeat-containing protein At3g48250, chloroplastic (LOC25493705), mRNA.
    Price & Availability↑
    CloneID OMe262963
    Clone ID Related Accession (Same CDS sequence) XM_013602283.2
    Accession Version XM_013602283.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1320bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product pentatricopeptide repeat-containing protein At3g48250, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016410.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2018 this sequence version replaced XM_013602283.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGTTGAGG AAAATGCAAG GCAGGTTGTT TTCAACAAGG TGGTTAGTGT GATTTTAGGA 
    TCTGAGTGGG GTGATGAGGT TGTGAATGAG CTTGTAGAGC TTAAGATTCA ATTTTCGGAT 
    AGTTTTGTGA TACGGGTTTT GAAAGAGCTT CGAAGTTGTC CTTTAAAGGG TTACAACTTT 
    TTTTATTGGG TTGGGAAGCA ATCTGGTTAT CAACATAATG CTGTGACTTA CAATGCAGTT 
    GCTAGAGTTC TTGCTAGGAT GGATTCAATT GAGGAGTTTT GGAGTATTCT TGCGGAGATG 
    AAGAGTGTGA ATTATGAATT GGAGATTGAT ACTTATATGA AGATAACAAT GCAGTTTGTA 
    AAGAATCAGA TGATGAAGGA TGCTGTTAAG CTTTACGAGC TTATGATGGA TGGTTCATAT 
    GAGCCATCGG TTCACGATTG CTGTTTCCTT TTAAACGCTA TCGCTACAAG TGATTCACCG 
    AATTCGGATC TTGTTTTCCG GGTAGCCAAG AAATATGAAT CCGCAGGGTA TACTCTCACC 
    AAGGAAATCT ATGATGGAAT ACACAGGTGT TTGACAAGTG TGGGGAAATT TGACAAAGCT 
    GAAAATATTG TTAAGACTAT GAGAAATGGT GGCCATGAAC CTGATAATAC TACATACAGT 
    CAACTGGTTT TTGGACTTTG TAAGATGAAG AGGGTTGAAG AAGCATGTAA GGTGCTGGAG 
    GAGATGGAAT CTAGTGGCTG CATTCCTGAT AACAAAACTT GGTCCATCTT TATCCAAGGG 
    CATTGTGCTG CCAATGCATT AGATAAGGCA TTACTTTGTT TAAGTAAGAT GATTGAAAAA 
    GACTGCAATC CAGATGCTGC TGCGATAGAC GCTTTGGTTG ATAGCTTTCT TAGTCAAGAG 
    AAAATAGACA ACGCATACAA GTTTCTTGTA GAGATGGTTG AGATATGCGC TTCTCCTAGG 
    CAATGTACAT ACGAGAAATT GATCCAAAAC CTGTTAGGAA TCGGAAAATT TGAAGATGCA 
    CTTGACCTTC TTTGTTTGAT GAGGAAACAC AAGTACTCTC CATTCAACAA ACCAATTGTG 
    CAGTATGTTT CAAAGTTTGG GACCGTGGAG GATGCTGAGA AATTCCTGAA GGCATGGAGA 
    AAGGGAAGTC CTAGGTCCCA TTCCGCCTAT CTTCATGTTT TGGAATCTTT CATCGGAGAA 
    GGTAGACTCT CTGAGGTCAA AGATCTATTG TGCAAGTTTC CTTCGCAGAT AAAGAGACAT 
    AAAAAGATCA ATGAATTTTT TAGCTTCAGT GGAGACTCGG ATGTTGCCAG TGCTACTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_013457737.2
    CDS1..1320
    Translation

    Target ORF information:

    RefSeq Version XM_013602283.2
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula pentatricopeptide repeat-containing protein At3g48250, chloroplastic (LOC25493705), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_013602283.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGTTGAGG AAAATGCAAG GCAGGTTGTT TTCAACAAGG TGGTTAGTGT GATTTTAGGA 
    TCTGAGTGGG GTGATGAGGT TGTGAATGAG CTTGTAGAGC TTAAGATTCA ATTTTCGGAT 
    AGTTTTGTGA TACGGGTTTT GAAAGAGCTT CGAAGTTGTC CTTTAAAGGG TTACAACTTT 
    TTTTATTGGG TTGGGAAGCA ATCTGGTTAT CAACATAATG CTGTGACTTA CAATGCAGTT 
    GCTAGAGTTC TTGCTAGGAT GGATTCAATT GAGGAGTTTT GGAGTATTCT TGCGGAGATG 
    AAGAGTGTGA ATTATGAATT GGAGATTGAT ACTTATATGA AGATAACAAT GCAGTTTGTA 
    AAGAATCAGA TGATGAAGGA TGCTGTTAAG CTTTACGAGC TTATGATGGA TGGTTCATAT 
    GAGCCATCGG TTCACGATTG CTGTTTCCTT TTAAACGCTA TCGCTACAAG TGATTCACCG 
    AATTCGGATC TTGTTTTCCG GGTAGCCAAG AAATATGAAT CCGCAGGGTA TACTCTCACC 
    AAGGAAATCT ATGATGGAAT ACACAGGTGT TTGACAAGTG TGGGGAAATT TGACAAAGCT 
    GAAAATATTG TTAAGACTAT GAGAAATGGT GGCCATGAAC CTGATAATAC TACATACAGT 
    CAACTGGTTT TTGGACTTTG TAAGATGAAG AGGGTTGAAG AAGCATGTAA GGTGCTGGAG 
    GAGATGGAAT CTAGTGGCTG CATTCCTGAT AACAAAACTT GGTCCATCTT TATCCAAGGG 
    CATTGTGCTG CCAATGCATT AGATAAGGCA TTACTTTGTT TAAGTAAGAT GATTGAAAAA 
    GACTGCAATC CAGATGCTGC TGCGATAGAC GCTTTGGTTG ATAGCTTTCT TAGTCAAGAG 
    AAAATAGACA ACGCATACAA GTTTCTTGTA GAGATGGTTG AGATATGCGC TTCTCCTAGG 
    CAATGTACAT ACGAGAAATT GATCCAAAAC CTGTTAGGAA TCGGAAAATT TGAAGATGCA 
    CTTGACCTTC TTTGTTTGAT GAGGAAACAC AAGTACTCTC CATTCAACAA ACCAATTGTG 
    CAGTATGTTT CAAAGTTTGG GACCGTGGAG GATGCTGAGA AATTCCTGAA GGCATGGAGA 
    AAGGGAAGTC CTAGGTCCCA TTCCGCCTAT CTTCATGTTT TGGAATCTTT CATCGGAGAA 
    GGTAGACTCT CTGAGGTCAA AGATCTATTG TGCAAGTTTC CTTCGCAGAT AAAGAGACAT 
    AAAAAGATCA ATGAATTTTT TAGCTTCAGT GGAGACTCGG ATGTTGCCAG TGCTACTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    MTR_4g104790 ( XM_013602283.1 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_013457737.1 Medicago truncatula PPR containing plant protein mRNA.
    Price & Availability↑
    CloneID OMe189829
    Clone ID Related Accession (Same CDS sequence) XM_013602283.1
    Accession Version XM_013602283.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1887bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-08-24
    Organism Medicago truncatula(barrel medic)
    Product PPR containing plant protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016410). ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    ATGAAAGCGT TAGAATCAGT TGCTCGTAAT CTCAGATTCA TCAACTCGTT ACTCACCATC 
    CGAGTCACTA CAACTCGCTC ACTCCACCAG GTTTCTCACT TCTCTCTCTA CACCCCACCA 
    CCCCTTTTTA TCCCCTCCCC GTTTCACGAT TCACGTTTTC ATCAAACACA CTATGTTTCA 
    TCAAAACCCA ACTCCATTGT TGAGCTTATT CAAACAAACG CTTGGTCTCA AGGGTTTGAA 
    AAAGAGTTAG AAAATTGTTA CCCTTCTTTG ACCCATGAAA CCGTTGTTTA CATTTTGAAA 
    CAATTGGATA ATGACCCATT AAAAGCTTCT TGCTTTTTCA ATTGGGTCAG TAAGAAAAAT 
    TGGTTTTTGC CAAGTTCTTC ATTGTGTAAT TTGATTCTTA GGATTTTAGC TAATAAGGAT 
    ACAATTGAAC AATTTTGGAT TCATTTAAGG ATGATGAGGA AAAAAGGGTT TTATCTTGAT 
    CGAATTACGT ATAGGTCGAT TTTGGAGGGT TTTAGACGAG AGAAAATGAA CAGGGATTTC 
    GCTTGTCTTA AAACTTTTTT TAAGAATATG GTTGAGGAAA ATGCAAGGCA GGTTGTTTTC 
    AACAAGGTGG TTAGTGTGAT TTTAGGATCT GAGTGGGGTG ATGAGGTTGT GAATGAGCTT 
    GTAGAGCTTA AGATTCAATT TTCGGATAGT TTTGTGATAC GGGTTTTGAA AGAGCTTCGA 
    AGTTGTCCTT TAAAGGGTTA CAACTTTTTT TATTGGGTTG GGAAGCAATC TGGTTATCAA 
    CATAATGCTG TGACTTACAA TGCAGTTGCT AGAGTTCTTG CTAGGATGGA TTCAATTGAG 
    GAGTTTTGGA GTATTCTTGC GGAGATGAAG AGTGTGAATT ATGAATTGGA GATTGATACT 
    TATATGAAGA TAACAATGCA GTTTGTAAAG AATCAGATGA TGAAGGATGC TGTTAAGCTT 
    TACGAGCTTA TGATGGATGG TTCATATGAG CCATCGGTTC ACGATTGCTG TTTCCTTTTA 
    AACGCTATCG CTACAAGTGA TTCACCGAAT TCGGATCTTG TTTTCCGGGT AGCCAAGAAA 
    TATGAATCCG CAGGGTATAC TCTCACCAAG GAAATCTATG ATGGAATACA CAGGTGTTTG 
    ACAAGTGTGG GGAAATTTGA CAAAGCTGAA AATATTGTTA AGACTATGAG AAATGGTGGC 
    CATGAACCTG ATAATACTAC ATACAGTCAA CTGGTTTTTG GACTTTGTAA GATGAAGAGG 
    GTTGAAGAAG CATGTAAGGT GCTGGAGGAG ATGGAATCTA GTGGCTGCAT TCCTGATAAC 
    AAAACTTGGT CCATCTTTAT CCAAGGGCAT TGTGCTGCCA ATGCATTAGA TAAGGCATTA 
    CTTTGTTTAA GTAAGATGAT TGAAAAAGAC TGCAATCCAG ATGCTGCTGC GATAGACGCT 
    TTGGTTGATA GCTTTCTTAG TCAAGAGAAA ATAGACAACG CATACAAGTT TCTTGTAGAG 
    ATGGTTGAGA TATGCGCTTC TCCTAGGCAA TGTACATACG AGAAATTGAT CCAAAACCTG 
    TTAGGAATCG GAAAATTTGA AGATGCACTT GACCTTCTTT GTTTGATGAG GAAACACAAG 
    TACTCTCCAT TCAACAAACC AATTGTGCAG TATGTTTCAA AGTTTGGGAC CGTGGAGGAT 
    GCTGAGAAAT TCCTGAAGGC ATGGAGAAAG GGAAGTCCTA GGTCCCATTC CGCCTATCTT 
    CATGTTTTGG AATCTTTCAT CGGAGAAGGT AGACTCTCTG AGGTCAAAGA TCTATTGTGC 
    AAGTTTCCTT CGCAGATAAA GAGACATAAA AAGATCAATG AATTTTTTAG CTTCAGTGGA 
    GACTCGGATG TTGCCAGTGC TACTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_013457737.1
    CDS38..1924
    Translation

    Target ORF information:

    RefSeq Version XM_013602283.1
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula PPR containing plant protein mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_013602283.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    ATGAAAGCGT TAGAATCAGT TGCTCGTAAT CTCAGATTCA TCAACTCGTT ACTCACCATC 
    CGAGTCACTA CAACTCGCTC ACTCCACCAG GTTTCTCACT TCTCTCTCTA CACCCCACCA 
    CCCCTTTTTA TCCCCTCCCC GTTTCACGAT TCACGTTTTC ATCAAACACA CTATGTTTCA 
    TCAAAACCCA ACTCCATTGT TGAGCTTATT CAAACAAACG CTTGGTCTCA AGGGTTTGAA 
    AAAGAGTTAG AAAATTGTTA CCCTTCTTTG ACCCATGAAA CCGTTGTTTA CATTTTGAAA 
    CAATTGGATA ATGACCCATT AAAAGCTTCT TGCTTTTTCA ATTGGGTCAG TAAGAAAAAT 
    TGGTTTTTGC CAAGTTCTTC ATTGTGTAAT TTGATTCTTA GGATTTTAGC TAATAAGGAT 
    ACAATTGAAC AATTTTGGAT TCATTTAAGG ATGATGAGGA AAAAAGGGTT TTATCTTGAT 
    CGAATTACGT ATAGGTCGAT TTTGGAGGGT TTTAGACGAG AGAAAATGAA CAGGGATTTC 
    GCTTGTCTTA AAACTTTTTT TAAGAATATG GTTGAGGAAA ATGCAAGGCA GGTTGTTTTC 
    AACAAGGTGG TTAGTGTGAT TTTAGGATCT GAGTGGGGTG ATGAGGTTGT GAATGAGCTT 
    GTAGAGCTTA AGATTCAATT TTCGGATAGT TTTGTGATAC GGGTTTTGAA AGAGCTTCGA 
    AGTTGTCCTT TAAAGGGTTA CAACTTTTTT TATTGGGTTG GGAAGCAATC TGGTTATCAA 
    CATAATGCTG TGACTTACAA TGCAGTTGCT AGAGTTCTTG CTAGGATGGA TTCAATTGAG 
    GAGTTTTGGA GTATTCTTGC GGAGATGAAG AGTGTGAATT ATGAATTGGA GATTGATACT 
    TATATGAAGA TAACAATGCA GTTTGTAAAG AATCAGATGA TGAAGGATGC TGTTAAGCTT 
    TACGAGCTTA TGATGGATGG TTCATATGAG CCATCGGTTC ACGATTGCTG TTTCCTTTTA 
    AACGCTATCG CTACAAGTGA TTCACCGAAT TCGGATCTTG TTTTCCGGGT AGCCAAGAAA 
    TATGAATCCG CAGGGTATAC TCTCACCAAG GAAATCTATG ATGGAATACA CAGGTGTTTG 
    ACAAGTGTGG GGAAATTTGA CAAAGCTGAA AATATTGTTA AGACTATGAG AAATGGTGGC 
    CATGAACCTG ATAATACTAC ATACAGTCAA CTGGTTTTTG GACTTTGTAA GATGAAGAGG 
    GTTGAAGAAG CATGTAAGGT GCTGGAGGAG ATGGAATCTA GTGGCTGCAT TCCTGATAAC 
    AAAACTTGGT CCATCTTTAT CCAAGGGCAT TGTGCTGCCA ATGCATTAGA TAAGGCATTA 
    CTTTGTTTAA GTAAGATGAT TGAAAAAGAC TGCAATCCAG ATGCTGCTGC GATAGACGCT 
    TTGGTTGATA GCTTTCTTAG TCAAGAGAAA ATAGACAACG CATACAAGTT TCTTGTAGAG 
    ATGGTTGAGA TATGCGCTTC TCCTAGGCAA TGTACATACG AGAAATTGAT CCAAAACCTG 
    TTAGGAATCG GAAAATTTGA AGATGCACTT GACCTTCTTT GTTTGATGAG GAAACACAAG 
    TACTCTCCAT TCAACAAACC AATTGTGCAG TATGTTTCAA AGTTTGGGAC CGTGGAGGAT 
    GCTGAGAAAT TCCTGAAGGC ATGGAGAAAG GGAAGTCCTA GGTCCCATTC CGCCTATCTT 
    CATGTTTTGG AATCTTTCAT CGGAGAAGGT AGACTCTCTG AGGTCAAAGA TCTATTGTGC 
    AAGTTTCCTT CGCAGATAAA GAGACATAAA AAGATCAATG AATTTTTTAG CTTCAGTGGA 
    GACTCGGATG TTGCCAGTGC TACTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
    BMC genomics15312(2014 Apr)
    Tang H,Krishnakumar V,Bidwell S,Rosen B,Chan A,Zhou S,Gentzbittel L,Childs KL,Yandell M,Gundlach H,Mayer KF,Schwartz DC,Town CD


    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature480(7378)520-4(2011 Nov)
    Young ND,Debell? F,Oldroyd GE,Geurts R,Cannon SB,Udvardi MK,Benedito VA,Mayer KF,Gouzy J,Schoof H,Van de Peer Y,Proost S,Cook DR,Meyers BC,Spannagl M,Cheung F,De Mita S,Krishnakumar V,Gundlach H,Zhou S,Mudge J,Bharti AK,Murray JD,Naoumkina MA,Rosen B,Silverstein KA,Tang H,Rombauts S,Zhao PX,Zhou P,Barbe V,Bardou P,Bechner M,Bellec A,Berger A,Berg?s H,Bidwell S,Bisseling T,Choisne N,Couloux A,Denny R,Deshpande S,Dai X,Doyle JJ,Dudez AM,Farmer AD,Fouteau S,Franken C,Gibelin C,Gish J,Goldstein S,Gonz?lez AJ,Green PJ,Hallab A,Hartog M,Hua A,Humphray SJ,Jeong DH,Jing Y,J?cker A,Kenton SM,Kim DJ,Klee K,Lai H,Lang C,Lin S,Macmil SL,Magdelenat G,Matthews L,McCorrison J,Monaghan EL,Mun JH,Najar FZ,Nicholson C,Noirot C,O'Bleness M,Paule CR,Poulain J,Prion F,Qin B,Qu C,Retzel EF,Riddle C,Sallet E,Samain S,Samson N,Sanders I,Saurat O,Scarpelli C,Schiex T,Segurens B,Severin AJ,Sherrier DJ,Shi R,Sims S,Singer SR,Sinharoy S,Sterck L,Viollet A,Wang BB,Wang K,Wang M,Wang X,Warfsmann J,Weissenbach J,White DD,White JD,Wiley GB,Wincker P,Xing Y,Yang L,Yao Z,Ying F,Zhai J,Zhou L,Zuber A,D?nari? J,Dixon RA,May GD,Schwartz DC,Rogers J,Qu?tier F,Town CD,Roe BA


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