ORF » Species Summary » Medicago truncatula » MTR_5g054780 cDNA ORF clone

MTR_5g054780 cDNA ORF clone, Medicago truncatula(barrel medic)

The following MTR_5g054780 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MTR_5g054780 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMe178982 XM_003614455.3
Latest version!		 Medicago truncatula CTL-like protein DDB_G0274487 (LOC11426925), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
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OMe178982 XM_003614455.2 Medicago truncatula plasma-membrane choline transporter family protein mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    MTR_5g054780 ( XM_003614455.3 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_003614503.2 Medicago truncatula CTL-like protein DDB_G0274487 (LOC11426925), mRNA.
    Price & Availability↑
    CloneID OMe178982
    Clone ID Related Accession (Same CDS sequence) XM_003614455.3 , XM_003614455.2
    Accession Version XM_003614455.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1476bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product CTL-like protein DDB_G0274487
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016411.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2018 this sequence version replaced XM_003614455.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGACAATTA CCATCATGGA TTCTTCCACT GCCACCAACA ATCAGGAGAA GTATAGAAAA 
    AGTGGCAACA ACAACATCAG TGAAGTGGTG AACATGGACC AAAAAAGGCG TTGGCATGAT 
    GTCTTCTGGT TAATACTATT TGTGATCCAA TTGATTGGCG TGGGTTTTGT CCTTGTGATT 
    CTTGGCGTTA ACAGGTTCAA GAAAAAGAAC AGGCTTGACA TTGATAAGTA CACATACCGG 
    TTCATGGAGA ATGAGGCTGG TTTGACAGAG GATTACTGGC CGCTCTATGC TGTCGCTGGC 
    GGCGTTGGAA CTGCTCTTGG ATGGAGTTGG TTGTTGCTGT TGGGTTCACG CGCAATCCAG 
    ATGATGAAGG TGTCTGTCCA TATTCTTACC ACTTATCTTG CTGTGATCAG TGTTTTGTGT 
    TTCTGGGCTC ACCAGTTTTT CTGGGGTGTT GCTTTTGCTA TTGGAGCAGC TCTGCAGTTT 
    TTGTATATTA TATCTGTCAT AGATAGACTT CCATTTACAA TGTTGGTTCT TCAAAAGGCT 
    GTTAAGATGG TATGGAATCT TCCAGAGGTT ATGAGAGTCG CATATGCGTT TATGGCTGTC 
    ATGCTCTTAT GGATGGCATT GTGGTCATTT GGAGCTGCTG GTGTTGTAGC TTCAAGCATG 
    GGCGACGGTG GACGCTGGTG GCTTCTTGTG GTCCTCTCTG TAAGCTTATT TTGGACAGGT 
    GCTGTGCTTT GTAATACAGT ACATGTCATA GTGTCTGGGT CACTGATCCG TGTTAGTATC 
    CATGGTGGTT GCGAGGCTGC ATCACTTCCG ACTAACTCCA TAATGAAATC TTTACAGTAT 
    GCTTTAACAA CATCTTTTGG CAGCATTTGT TATGGCTCAT TATTCACAGC TGCTATTAGG 
    ACACTGCGAT GGGAGATAAG AGGAATCCGG TCAAAGATAG GCAAGAATGA GTGCTTGCTT 
    TGCTGTGTTG ATTTCCTTTT CCATCTTGTG GAGACTCTTG TCAGGTTCTT TAACAAGTAT 
    GCGTATGTCC AGATTGGTGT TTATGGTAAA AGCTTTAACC GTTCTGCAAG AGATGCCTGG 
    GAGTTATTTC AATCAACGGG AGTTGAAGCA CTTGTGGCGT ATGATTGTTC AGGTGCTGTG 
    CTGTTAATGG GAACCATTTT AGGTGGGCTG ATAACTGGAA CTTGCTCCGG TGTTTGGGCA 
    TGGATGAAGT GGAGTGATAG AGCTTTTATG ATTGGATCCA CATCTATGCT CATGGGCATG 
    ATATTGGTTG GAGTGGCAAT GGTTGTGGTG GAAAGTGCAG TGACATCCAT ATATATCTGT 
    TATGCGGAAG ACCCATTATT GATTCAGAGA TGGGACCATG AGTTTTTCAA CCAGATTTCC 
    GAGACATTGC ACCAGCGACT TCAACATAGG AGCTCACGTG CAAGGGAAGT TTTAACCCAC 
    GATCACCTTG ATTCTCGTAT ACCAGAAAAT GCCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003614503.2
    CDS430..1905
    Translation

    Target ORF information:

    RefSeq Version XM_003614455.3
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula CTL-like protein DDB_G0274487 (LOC11426925), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_003614455.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGACAATTA CCATCATGGA TTCTTCCACT GCCACCAACA ATCAGGAGAA GTATAGAAAA 
    AGTGGCAACA ACAACATCAG TGAAGTGGTG AACATGGACC AAAAAAGGCG TTGGCATGAT 
    GTCTTCTGGT TAATACTATT TGTGATCCAA TTGATTGGCG TGGGTTTTGT CCTTGTGATT 
    CTTGGCGTTA ACAGGTTCAA GAAAAAGAAC AGGCTTGACA TTGATAAGTA CACATACCGG 
    TTCATGGAGA ATGAGGCTGG TTTGACAGAG GATTACTGGC CGCTCTATGC TGTCGCTGGC 
    GGCGTTGGAA CTGCTCTTGG ATGGAGTTGG TTGTTGCTGT TGGGTTCACG CGCAATCCAG 
    ATGATGAAGG TGTCTGTCCA TATTCTTACC ACTTATCTTG CTGTGATCAG TGTTTTGTGT 
    TTCTGGGCTC ACCAGTTTTT CTGGGGTGTT GCTTTTGCTA TTGGAGCAGC TCTGCAGTTT 
    TTGTATATTA TATCTGTCAT AGATAGACTT CCATTTACAA TGTTGGTTCT TCAAAAGGCT 
    GTTAAGATGG TATGGAATCT TCCAGAGGTT ATGAGAGTCG CATATGCGTT TATGGCTGTC 
    ATGCTCTTAT GGATGGCATT GTGGTCATTT GGAGCTGCTG GTGTTGTAGC TTCAAGCATG 
    GGCGACGGTG GACGCTGGTG GCTTCTTGTG GTCCTCTCTG TAAGCTTATT TTGGACAGGT 
    GCTGTGCTTT GTAATACAGT ACATGTCATA GTGTCTGGGT CACTGATCCG TGTTAGTATC 
    CATGGTGGTT GCGAGGCTGC ATCACTTCCG ACTAACTCCA TAATGAAATC TTTACAGTAT 
    GCTTTAACAA CATCTTTTGG CAGCATTTGT TATGGCTCAT TATTCACAGC TGCTATTAGG 
    ACACTGCGAT GGGAGATAAG AGGAATCCGG TCAAAGATAG GCAAGAATGA GTGCTTGCTT 
    TGCTGTGTTG ATTTCCTTTT CCATCTTGTG GAGACTCTTG TCAGGTTCTT TAACAAGTAT 
    GCGTATGTCC AGATTGGTGT TTATGGTAAA AGCTTTAACC GTTCTGCAAG AGATGCCTGG 
    GAGTTATTTC AATCAACGGG AGTTGAAGCA CTTGTGGCGT ATGATTGTTC AGGTGCTGTG 
    CTGTTAATGG GAACCATTTT AGGTGGGCTG ATAACTGGAA CTTGCTCCGG TGTTTGGGCA 
    TGGATGAAGT GGAGTGATAG AGCTTTTATG ATTGGATCCA CATCTATGCT CATGGGCATG 
    ATATTGGTTG GAGTGGCAAT GGTTGTGGTG GAAAGTGCAG TGACATCCAT ATATATCTGT 
    TATGCGGAAG ACCCATTATT GATTCAGAGA TGGGACCATG AGTTTTTCAA CCAGATTTCC 
    GAGACATTGC ACCAGCGACT TCAACATAGG AGCTCACGTG CAAGGGAAGT TTTAACCCAC 
    GATCACCTTG ATTCTCGTAT ACCAGAAAAT GCCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    MTR_5g054780 ( XM_003614455.2 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_003614503.2 Medicago truncatula plasma-membrane choline transporter family protein mRNA.
    Price & Availability↑
    CloneID OMe178982
    Clone ID Related Accession (Same CDS sequence) XM_003614455.3 , XM_003614455.2
    Accession Version XM_003614455.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1476bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-08-24
    Organism Medicago truncatula(barrel medic)
    Product plasma-membrane choline transporter family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016411). On Aug 25, 2015 this sequence version replaced XM_003614455.1. ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGACAATTA CCATCATGGA TTCTTCCACT GCCACCAACA ATCAGGAGAA GTATAGAAAA 
    AGTGGCAACA ACAACATCAG TGAAGTGGTG AACATGGACC AAAAAAGGCG TTGGCATGAT 
    GTCTTCTGGT TAATACTATT TGTGATCCAA TTGATTGGCG TGGGTTTTGT CCTTGTGATT 
    CTTGGCGTTA ACAGGTTCAA GAAAAAGAAC AGGCTTGACA TTGATAAGTA CACATACCGG 
    TTCATGGAGA ATGAGGCTGG TTTGACAGAG GATTACTGGC CGCTCTATGC TGTCGCTGGC 
    GGCGTTGGAA CTGCTCTTGG ATGGAGTTGG TTGTTGCTGT TGGGTTCACG CGCAATCCAG 
    ATGATGAAGG TGTCTGTCCA TATTCTTACC ACTTATCTTG CTGTGATCAG TGTTTTGTGT 
    TTCTGGGCTC ACCAGTTTTT CTGGGGTGTT GCTTTTGCTA TTGGAGCAGC TCTGCAGTTT 
    TTGTATATTA TATCTGTCAT AGATAGACTT CCATTTACAA TGTTGGTTCT TCAAAAGGCT 
    GTTAAGATGG TATGGAATCT TCCAGAGGTT ATGAGAGTCG CATATGCGTT TATGGCTGTC 
    ATGCTCTTAT GGATGGCATT GTGGTCATTT GGAGCTGCTG GTGTTGTAGC TTCAAGCATG 
    GGCGACGGTG GACGCTGGTG GCTTCTTGTG GTCCTCTCTG TAAGCTTATT TTGGACAGGT 
    GCTGTGCTTT GTAATACAGT ACATGTCATA GTGTCTGGGT CACTGATCCG TGTTAGTATC 
    CATGGTGGTT GCGAGGCTGC ATCACTTCCG ACTAACTCCA TAATGAAATC TTTACAGTAT 
    GCTTTAACAA CATCTTTTGG CAGCATTTGT TATGGCTCAT TATTCACAGC TGCTATTAGG 
    ACACTGCGAT GGGAGATAAG AGGAATCCGG TCAAAGATAG GCAAGAATGA GTGCTTGCTT 
    TGCTGTGTTG ATTTCCTTTT CCATCTTGTG GAGACTCTTG TCAGGTTCTT TAACAAGTAT 
    GCGTATGTCC AGATTGGTGT TTATGGTAAA AGCTTTAACC GTTCTGCAAG AGATGCCTGG 
    GAGTTATTTC AATCAACGGG AGTTGAAGCA CTTGTGGCGT ATGATTGTTC AGGTGCTGTG 
    CTGTTAATGG GAACCATTTT AGGTGGGCTG ATAACTGGAA CTTGCTCCGG TGTTTGGGCA 
    TGGATGAAGT GGAGTGATAG AGCTTTTATG ATTGGATCCA CATCTATGCT CATGGGCATG 
    ATATTGGTTG GAGTGGCAAT GGTTGTGGTG GAAAGTGCAG TGACATCCAT ATATATCTGT 
    TATGCGGAAG ACCCATTATT GATTCAGAGA TGGGACCATG AGTTTTTCAA CCAGATTTCC 
    GAGACATTGC ACCAGCGACT TCAACATAGG AGCTCACGTG CAAGGGAAGT TTTAACCCAC 
    GATCACCTTG ATTCTCGTAT ACCAGAAAAT GCCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003614503.2
    CDS60..1535
    Translation

    Target ORF information:

    RefSeq Version XM_003614455.2
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula plasma-membrane choline transporter family protein mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_003614455.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGACAATTA CCATCATGGA TTCTTCCACT GCCACCAACA ATCAGGAGAA GTATAGAAAA 
    AGTGGCAACA ACAACATCAG TGAAGTGGTG AACATGGACC AAAAAAGGCG TTGGCATGAT 
    GTCTTCTGGT TAATACTATT TGTGATCCAA TTGATTGGCG TGGGTTTTGT CCTTGTGATT 
    CTTGGCGTTA ACAGGTTCAA GAAAAAGAAC AGGCTTGACA TTGATAAGTA CACATACCGG 
    TTCATGGAGA ATGAGGCTGG TTTGACAGAG GATTACTGGC CGCTCTATGC TGTCGCTGGC 
    GGCGTTGGAA CTGCTCTTGG ATGGAGTTGG TTGTTGCTGT TGGGTTCACG CGCAATCCAG 
    ATGATGAAGG TGTCTGTCCA TATTCTTACC ACTTATCTTG CTGTGATCAG TGTTTTGTGT 
    TTCTGGGCTC ACCAGTTTTT CTGGGGTGTT GCTTTTGCTA TTGGAGCAGC TCTGCAGTTT 
    TTGTATATTA TATCTGTCAT AGATAGACTT CCATTTACAA TGTTGGTTCT TCAAAAGGCT 
    GTTAAGATGG TATGGAATCT TCCAGAGGTT ATGAGAGTCG CATATGCGTT TATGGCTGTC 
    ATGCTCTTAT GGATGGCATT GTGGTCATTT GGAGCTGCTG GTGTTGTAGC TTCAAGCATG 
    GGCGACGGTG GACGCTGGTG GCTTCTTGTG GTCCTCTCTG TAAGCTTATT TTGGACAGGT 
    GCTGTGCTTT GTAATACAGT ACATGTCATA GTGTCTGGGT CACTGATCCG TGTTAGTATC 
    CATGGTGGTT GCGAGGCTGC ATCACTTCCG ACTAACTCCA TAATGAAATC TTTACAGTAT 
    GCTTTAACAA CATCTTTTGG CAGCATTTGT TATGGCTCAT TATTCACAGC TGCTATTAGG 
    ACACTGCGAT GGGAGATAAG AGGAATCCGG TCAAAGATAG GCAAGAATGA GTGCTTGCTT 
    TGCTGTGTTG ATTTCCTTTT CCATCTTGTG GAGACTCTTG TCAGGTTCTT TAACAAGTAT 
    GCGTATGTCC AGATTGGTGT TTATGGTAAA AGCTTTAACC GTTCTGCAAG AGATGCCTGG 
    GAGTTATTTC AATCAACGGG AGTTGAAGCA CTTGTGGCGT ATGATTGTTC AGGTGCTGTG 
    CTGTTAATGG GAACCATTTT AGGTGGGCTG ATAACTGGAA CTTGCTCCGG TGTTTGGGCA 
    TGGATGAAGT GGAGTGATAG AGCTTTTATG ATTGGATCCA CATCTATGCT CATGGGCATG 
    ATATTGGTTG GAGTGGCAAT GGTTGTGGTG GAAAGTGCAG TGACATCCAT ATATATCTGT 
    TATGCGGAAG ACCCATTATT GATTCAGAGA TGGGACCATG AGTTTTTCAA CCAGATTTCC 
    GAGACATTGC ACCAGCGACT TCAACATAGG AGCTCACGTG CAAGGGAAGT TTTAACCCAC 
    GATCACCTTG ATTCTCGTAT ACCAGAAAAT GCCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
    BMC genomics15312(2014 Apr)
    Tang H,Krishnakumar V,Bidwell S,Rosen B,Chan A,Zhou S,Gentzbittel L,Childs KL,Yandell M,Gundlach H,Mayer KF,Schwartz DC,Town CD


    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature480(7378)520-4(2011 Nov)
    Young ND,Debell? F,Oldroyd GE,Geurts R,Cannon SB,Udvardi MK,Benedito VA,Mayer KF,Gouzy J,Schoof H,Van de Peer Y,Proost S,Cook DR,Meyers BC,Spannagl M,Cheung F,De Mita S,Krishnakumar V,Gundlach H,Zhou S,Mudge J,Bharti AK,Murray JD,Naoumkina MA,Rosen B,Silverstein KA,Tang H,Rombauts S,Zhao PX,Zhou P,Barbe V,Bardou P,Bechner M,Bellec A,Berger A,Berg?s H,Bidwell S,Bisseling T,Choisne N,Couloux A,Denny R,Deshpande S,Dai X,Doyle JJ,Dudez AM,Farmer AD,Fouteau S,Franken C,Gibelin C,Gish J,Goldstein S,Gonz?lez AJ,Green PJ,Hallab A,Hartog M,Hua A,Humphray SJ,Jeong DH,Jing Y,J?cker A,Kenton SM,Kim DJ,Klee K,Lai H,Lang C,Lin S,Macmil SL,Magdelenat G,Matthews L,McCorrison J,Monaghan EL,Mun JH,Najar FZ,Nicholson C,Noirot C,O'Bleness M,Paule CR,Poulain J,Prion F,Qin B,Qu C,Retzel EF,Riddle C,Sallet E,Samain S,Samson N,Sanders I,Saurat O,Scarpelli C,Schiex T,Segurens B,Severin AJ,Sherrier DJ,Shi R,Sims S,Singer SR,Sinharoy S,Sterck L,Viollet A,Wang BB,Wang K,Wang M,Wang X,Warfsmann J,Weissenbach J,White DD,White JD,Wiley GB,Wincker P,Xing Y,Yang L,Yao Z,Ying F,Zhai J,Zhou L,Zuber A,D?nari? J,Dixon RA,May GD,Schwartz DC,Rogers J,Qu?tier F,Town CD,Roe BA


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