| Gene Symbol | HD11 |
| Entrez Gene ID | 103441515 |
| Full Name | homeobox protein knotted-1-like 3 |
| Synonyms | KNAP3 |
| Gene Type | protein-coding |
| Organism | Malus domestica(apple) |
ORF » Species Summary » Malus domestica » HD11 cDNA ORF clone
| Gene Symbol | HD11 |
| Entrez Gene ID | 103441515 |
| Full Name | homeobox protein knotted-1-like 3 |
| Synonyms | KNAP3 |
| Gene Type | protein-coding |
| Organism | Malus domestica(apple) |
| mRNA | Protein | Name |
|---|---|---|
| XM_008380192.2 | XP_008378414.1 | homeobox protein knotted-1-like 3 isoform X1 |
| XM_008380192.3 | XP_008378414.2 | homeobox protein knotted-1-like 3 isoform X1 |
| XM_008380193.2 | XP_008378415.1 | homeobox protein knotted-1-like 3 isoform X2 |
| XM_008380193.3 | XP_008378415.2 | homeobox protein knotted-1-like 3 isoform X2 |
| NM_001293955.1 | NP_001280884.1 | homeobox protein knotted-1-like 3 |
Knotted1-like homeobox genes are expressed during apple tree (Malus domestica [L.] Borkh) growth and development.
Watillon B, Kettmann R, Boxus P, Burny A
Plant molecular biology33(4)757-63(1997 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following HD11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HD11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OMa163491 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001293955.1 | |
| Accession Version | NM_001293955.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1284bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-09-23 | |
| Organism | Malus domestica(apple) | |
| Product | homeobox protein knotted-1-like 3 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from HM122569.1. ##Evidence-Data-START## Transcript exon combination :: HM122569.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN08392761, SAMN09744176 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGCGTACC ACAACCACCT CTCCCAGGAC CTCCCTCTCC ACCACTTCAC CGACCAAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001280884.1 |
| CDS | 182..1465 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001293955.1 |
1 | ATGGCGTACC ACAACCACCT CTCCCAGGAC CTCCCTCTCC ACCACTTCAC CGACCAAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMa140193 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008380192.2 | |
| Accession Version | XM_008380192.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1320bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-06-21 | |
| Organism | Malus domestica(apple) | |
| Product | homeobox protein knotted-1-like 3 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024246.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_008380192.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Malus domestica Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCGTACC ACAACCACCT CTCCCAGGAC CTCCCTCTCC ACCACTTCAC CGACCAAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008378414.1 |
| CDS | 449..1768 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008380192.2 |
1 | ATGGCGTACC ACAACCACCT CTCCCAGGAC CTCCCTCTCC ACCACTTCAC CGACCAAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMa140194 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008380193.2 | |
| Accession Version | XM_008380193.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1284bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-06-21 | |
| Organism | Malus domestica(apple) | |
| Product | homeobox protein knotted-1-like 3 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024246.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_008380193.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Malus domestica Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCGTACC ACAACCACCT CTCCCAGGAC CTCCCTCTCC ACCACTTCAC CGACCAAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008378415.1 |
| CDS | 449..1732 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008380193.2 |
1 | ATGGCGTACC ACAACCACCT CTCCCAGGAC CTCCCTCTCC ACCACTTCAC CGACCAAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMa431044 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008380192.3 | |
| Accession Version | XM_008380192.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1320bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-05-02 | |
| Organism | Malus domestica(apple) | |
| Product | homeobox protein knotted-1-like 3 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041796.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 3, 2019 this sequence version replaced XM_008380192.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Malus domestica Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCGTACC ACAACCACCT CTCCCAGGAC CTCCCTCTCC ACCACTTCAC CGACCAAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008378414.2 |
| CDS | 455..1774 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008380192.3 |
1 | ATGGCGTACC ACAACCACCT CTCCCAGGAC CTCCCTCTCC ACCACTTCAC CGACCAAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMa431045 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008380193.3 | |
| Accession Version | XM_008380193.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1284bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-05-02 | |
| Organism | Malus domestica(apple) | |
| Product | homeobox protein knotted-1-like 3 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041796.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 3, 2019 this sequence version replaced XM_008380193.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Malus domestica Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCGTACC ACAACCACCT CTCCCAGGAC CTCCCTCTCC ACCACTTCAC CGACCAAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008378415.2 |
| CDS | 454..1737 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008380193.3 |
1 | ATGGCGTACC ACAACCACCT CTCCCAGGAC CTCCCTCTCC ACCACTTCAC CGACCAAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Knotted1-like homeobox genes are expressed during apple tree (Malus domestica [L.] Borkh) growth and development. |