HOXD3 cDNA ORF clone, Lepidothrix coronata(blue-crowned manakin)

Gene
Clones
gRNAs

Summary

Gene Symbol	HOXD3
Entrez Gene ID	108508684
Full Name	homeobox D3
Gene Type	protein-coding
Organism	Lepidothrix coronata(blue-crowned manakin)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017837673.1	XP_017693162.1	homeobox protein Hox-D3
XM_017837680.1	XP_017693169.1	homeobox protein Hox-D3

Pathways from BioSystems
Gene Ontology

The following HOXD3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HOXD3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLe50363	XM_017837673.1 Latest version!	Lepidothrix coronata homeobox D3 (HOXD3), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00
OLe50363	XM_017837680.1 Latest version!	Lepidothrix coronata homeobox D3 (HOXD3), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

HOXD3 ( XM_017837673.1 ) cDNA ORF clone, Lepidothrix coronata(blue-crowned manakin) -> XP_017693162.1 Lepidothrix coronata homeobox D3 (HOXD3), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OLe50363
Clone ID Related Accession (Same CDS sequence)	XM_017837673.1 , XM_017837680.1
Accession Version	XM_017837673.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1248bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-08-10
Organism	Lepidothrix coronata(blue-crowned manakin)
Product	homeobox protein Hox-D3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016690187.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Lepidothrix coronata Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTATTTG AGCGGGGGCC GCGGGCCTCG GCGATCGCAG AGCAGAGGAT GCAGAAAGCC 
GCCTACTACG ACAACGCGGG GCTCTTCGGG GGCTACACCT ACAGCAAGGC CGACGCCTAC 
CCCTACGGCG CGGCCCACCA GCCCTACGGC CAGGCCGGCT TGGACAGCGA GTACCCCGGC 
TCCGCCTGCT CCGTCCAGGG CTCGGCGCCC GGACGCGCCC CGGCCCACAA GGGCAGCGAA 
CTGAGCGGGA GCTGCATGCG GCCGGGCGGG GGCGGCCCCG GGGGCAGTCA GCCCCCGGGG 
ATGGGCGAGC AGCAACCCCC GGCCCTGCCG CCCTCCTCCC CGCCCAACCC CCCTCCCAGT 
GTGCCCCCTC CGAAAAAAGC CAAGGGGGGC CCAAACTCCT CGGGCTCGGC CACCGCCACT 
CTCAGCAAGC AGATATTCCC CTGGATGAAG GAGTCCCGGC AGAACTCCAA GCAGAAAAGC 
ACCTGCGCCC CCCCAGGAGA GAGCTGCGAG GACAAGAGCC CCCCCGGGCC GGCCTCCAAG 
AGGGTGCGCA CAGCCTACAC CAGCGCGCAG CTGGTGGAGC TGGAGAAGGA GTTTCACTTC 
AACCGCTACC TGTGCCGACC GCGCCGTGTG GAGATGGCCA ACCTGCTCAA CCTGACCGAG 
CGGCAGATCA AGATCTGGTT TCAGAACCGC CGGATGAAGT ACAAAAAGGA CCAAAAAGCC 
AAAGGCATCA TGCACTCCCC CGTCGGACAG TCCCCGGACC GCAGCCCCCC CCTGAGCGGC 
CCAAACCACG TCGGCTACTC CAGCCAGCTC CCCGGCGTCA ACAGCCTCAG CTACGACGCG 
CCCTCGCCCA CCTCCTTCGC CAAGTCCCAG CAGAGCATGT ACGGGCTGGC CGCCTACACG 
GCGCCGCTGA GCAGCTGCCT GCCGCAGCAG AAGCGCTACG CGGGCGCGGA GTACGACCCC 
CACCCCATGC AGAGCGGCGG CGGCGGCTTC GCCAACCCCA GCCTGCAGGG CAGCCCCGTC 
TACGTGGGGG GCAACTTCGT GGACTCGATG CCAGCCTCAG GCCCCATGTT CAACTTGGGG 
CACCTGCAGC ACCCCTCCTC CGCTAGCGTG GACTACAGCT GCGCCGCACA GATCCCCGGC 
GGCCACCACC ACGGACCTTG CGACCCCCAC CCTACCTACA CGGACCTCTC CTCTCACCAC 
ACCTCTCAGG GACGGATGCA GGAGGCGCCC AAGCTCACGC ATCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017693162.1
CDS	181..1428
Translation	MLFERGPRASAIAEQRMQKAAYYDNAGLFGGYTYSKADAYPYGAAHQPYGQAGLDSEYPGSACSVQGSAPGRAPAHKGSELSGSCMRPGGGGPGGSQPPGMGEQQPPALPPSSPPNPPPSVPPPKKAKGGPNSSGSATATLSKQIFPWMKESRQNSKQKSTCAPPGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGIMHSPVGQSPDRSPPLSGPNHVGYSSQLPGVNSLSYDAPSPTSFAKSQQSMYGLAAYTAPLSSCLPQQKRYAGAEYDPHPMQSGGGGFANPSLQGSPVYVGGNFVDSMPASGPMFNLGHLQHPSSASVDYSCAAQIPGGHHHGPCDPHPTYTDLSSHHTSQGRMQEAPKLTHL

Target ORF information:

RefSeq Version	XM_017837673.1
Organism	Lepidothrix coronata(blue-crowned manakin)
Definition	Lepidothrix coronata homeobox D3 (HOXD3), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017837673.1

ORF Insert Sequence:

ATGTTATTTG AGCGGGGGCC GCGGGCCTCG GCGATCGCAG AGCAGAGGAT GCAGAAAGCC 
GCCTACTACG ACAACGCGGG GCTCTTCGGG GGCTACACCT ACAGCAAGGC CGACGCCTAC 
CCCTACGGCG CGGCCCACCA GCCCTACGGC CAGGCCGGCT TGGACAGCGA GTACCCCGGC 
TCCGCCTGCT CCGTCCAGGG CTCGGCGCCC GGACGCGCCC CGGCCCACAA GGGCAGCGAA 
CTGAGCGGGA GCTGCATGCG GCCGGGCGGG GGCGGCCCCG GGGGCAGTCA GCCCCCGGGG 
ATGGGCGAGC AGCAACCCCC GGCCCTGCCG CCCTCCTCCC CGCCCAACCC CCCTCCCAGT 
GTGCCCCCTC CGAAAAAAGC CAAGGGGGGC CCAAACTCCT CGGGCTCGGC CACCGCCACT 
CTCAGCAAGC AGATATTCCC CTGGATGAAG GAGTCCCGGC AGAACTCCAA GCAGAAAAGC 
ACCTGCGCCC CCCCAGGAGA GAGCTGCGAG GACAAGAGCC CCCCCGGGCC GGCCTCCAAG 
AGGGTGCGCA CAGCCTACAC CAGCGCGCAG CTGGTGGAGC TGGAGAAGGA GTTTCACTTC 
AACCGCTACC TGTGCCGACC GCGCCGTGTG GAGATGGCCA ACCTGCTCAA CCTGACCGAG 
CGGCAGATCA AGATCTGGTT TCAGAACCGC CGGATGAAGT ACAAAAAGGA CCAAAAAGCC 
AAAGGCATCA TGCACTCCCC CGTCGGACAG TCCCCGGACC GCAGCCCCCC CCTGAGCGGC 
CCAAACCACG TCGGCTACTC CAGCCAGCTC CCCGGCGTCA ACAGCCTCAG CTACGACGCG 
CCCTCGCCCA CCTCCTTCGC CAAGTCCCAG CAGAGCATGT ACGGGCTGGC CGCCTACACG 
GCGCCGCTGA GCAGCTGCCT GCCGCAGCAG AAGCGCTACG CGGGCGCGGA GTACGACCCC 
CACCCCATGC AGAGCGGCGG CGGCGGCTTC GCCAACCCCA GCCTGCAGGG CAGCCCCGTC 
TACGTGGGGG GCAACTTCGT GGACTCGATG CCAGCCTCAG GCCCCATGTT CAACTTGGGG 
CACCTGCAGC ACCCCTCCTC CGCTAGCGTG GACTACAGCT GCGCCGCACA GATCCCCGGC 
GGCCACCACC ACGGACCTTG CGACCCCCAC CCTACCTACA CGGACCTCTC CTCTCACCAC 
ACCTCTCAGG GACGGATGCA GGAGGCGCCC AAGCTCACGC ATCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

HOXD3 ( XM_017837680.1 ) cDNA ORF clone, Lepidothrix coronata(blue-crowned manakin) -> XP_017693169.1 Lepidothrix coronata homeobox D3 (HOXD3), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OLe50363
Clone ID Related Accession (Same CDS sequence)	XM_017837673.1 , XM_017837680.1
Accession Version	XM_017837680.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1248bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-08-10
Organism	Lepidothrix coronata(blue-crowned manakin)
Product	homeobox protein Hox-D3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016690187.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Lepidothrix coronata Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTATTTG AGCGGGGGCC GCGGGCCTCG GCGATCGCAG AGCAGAGGAT GCAGAAAGCC 
GCCTACTACG ACAACGCGGG GCTCTTCGGG GGCTACACCT ACAGCAAGGC CGACGCCTAC 
CCCTACGGCG CGGCCCACCA GCCCTACGGC CAGGCCGGCT TGGACAGCGA GTACCCCGGC 
TCCGCCTGCT CCGTCCAGGG CTCGGCGCCC GGACGCGCCC CGGCCCACAA GGGCAGCGAA 
CTGAGCGGGA GCTGCATGCG GCCGGGCGGG GGCGGCCCCG GGGGCAGTCA GCCCCCGGGG 
ATGGGCGAGC AGCAACCCCC GGCCCTGCCG CCCTCCTCCC CGCCCAACCC CCCTCCCAGT 
GTGCCCCCTC CGAAAAAAGC CAAGGGGGGC CCAAACTCCT CGGGCTCGGC CACCGCCACT 
CTCAGCAAGC AGATATTCCC CTGGATGAAG GAGTCCCGGC AGAACTCCAA GCAGAAAAGC 
ACCTGCGCCC CCCCAGGAGA GAGCTGCGAG GACAAGAGCC CCCCCGGGCC GGCCTCCAAG 
AGGGTGCGCA CAGCCTACAC CAGCGCGCAG CTGGTGGAGC TGGAGAAGGA GTTTCACTTC 
AACCGCTACC TGTGCCGACC GCGCCGTGTG GAGATGGCCA ACCTGCTCAA CCTGACCGAG 
CGGCAGATCA AGATCTGGTT TCAGAACCGC CGGATGAAGT ACAAAAAGGA CCAAAAAGCC 
AAAGGCATCA TGCACTCCCC CGTCGGACAG TCCCCGGACC GCAGCCCCCC CCTGAGCGGC 
CCAAACCACG TCGGCTACTC CAGCCAGCTC CCCGGCGTCA ACAGCCTCAG CTACGACGCG 
CCCTCGCCCA CCTCCTTCGC CAAGTCCCAG CAGAGCATGT ACGGGCTGGC CGCCTACACG 
GCGCCGCTGA GCAGCTGCCT GCCGCAGCAG AAGCGCTACG CGGGCGCGGA GTACGACCCC 
CACCCCATGC AGAGCGGCGG CGGCGGCTTC GCCAACCCCA GCCTGCAGGG CAGCCCCGTC 
TACGTGGGGG GCAACTTCGT GGACTCGATG CCAGCCTCAG GCCCCATGTT CAACTTGGGG 
CACCTGCAGC ACCCCTCCTC CGCTAGCGTG GACTACAGCT GCGCCGCACA GATCCCCGGC 
GGCCACCACC ACGGACCTTG CGACCCCCAC CCTACCTACA CGGACCTCTC CTCTCACCAC 
ACCTCTCAGG GACGGATGCA GGAGGCGCCC AAGCTCACGC ATCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017693169.1
CDS	224..1471
Translation	MLFERGPRASAIAEQRMQKAAYYDNAGLFGGYTYSKADAYPYGAAHQPYGQAGLDSEYPGSACSVQGSAPGRAPAHKGSELSGSCMRPGGGGPGGSQPPGMGEQQPPALPPSSPPNPPPSVPPPKKAKGGPNSSGSATATLSKQIFPWMKESRQNSKQKSTCAPPGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGIMHSPVGQSPDRSPPLSGPNHVGYSSQLPGVNSLSYDAPSPTSFAKSQQSMYGLAAYTAPLSSCLPQQKRYAGAEYDPHPMQSGGGGFANPSLQGSPVYVGGNFVDSMPASGPMFNLGHLQHPSSASVDYSCAAQIPGGHHHGPCDPHPTYTDLSSHHTSQGRMQEAPKLTHL

Target ORF information:

RefSeq Version	XM_017837680.1
Organism	Lepidothrix coronata(blue-crowned manakin)
Definition	Lepidothrix coronata homeobox D3 (HOXD3), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017837680.1

ORF Insert Sequence:

ATGTTATTTG AGCGGGGGCC GCGGGCCTCG GCGATCGCAG AGCAGAGGAT GCAGAAAGCC 
GCCTACTACG ACAACGCGGG GCTCTTCGGG GGCTACACCT ACAGCAAGGC CGACGCCTAC 
CCCTACGGCG CGGCCCACCA GCCCTACGGC CAGGCCGGCT TGGACAGCGA GTACCCCGGC 
TCCGCCTGCT CCGTCCAGGG CTCGGCGCCC GGACGCGCCC CGGCCCACAA GGGCAGCGAA 
CTGAGCGGGA GCTGCATGCG GCCGGGCGGG GGCGGCCCCG GGGGCAGTCA GCCCCCGGGG 
ATGGGCGAGC AGCAACCCCC GGCCCTGCCG CCCTCCTCCC CGCCCAACCC CCCTCCCAGT 
GTGCCCCCTC CGAAAAAAGC CAAGGGGGGC CCAAACTCCT CGGGCTCGGC CACCGCCACT 
CTCAGCAAGC AGATATTCCC CTGGATGAAG GAGTCCCGGC AGAACTCCAA GCAGAAAAGC 
ACCTGCGCCC CCCCAGGAGA GAGCTGCGAG GACAAGAGCC CCCCCGGGCC GGCCTCCAAG 
AGGGTGCGCA CAGCCTACAC CAGCGCGCAG CTGGTGGAGC TGGAGAAGGA GTTTCACTTC 
AACCGCTACC TGTGCCGACC GCGCCGTGTG GAGATGGCCA ACCTGCTCAA CCTGACCGAG 
CGGCAGATCA AGATCTGGTT TCAGAACCGC CGGATGAAGT ACAAAAAGGA CCAAAAAGCC 
AAAGGCATCA TGCACTCCCC CGTCGGACAG TCCCCGGACC GCAGCCCCCC CCTGAGCGGC 
CCAAACCACG TCGGCTACTC CAGCCAGCTC CCCGGCGTCA ACAGCCTCAG CTACGACGCG 
CCCTCGCCCA CCTCCTTCGC CAAGTCCCAG CAGAGCATGT ACGGGCTGGC CGCCTACACG 
GCGCCGCTGA GCAGCTGCCT GCCGCAGCAG AAGCGCTACG CGGGCGCGGA GTACGACCCC 
CACCCCATGC AGAGCGGCGG CGGCGGCTTC GCCAACCCCA GCCTGCAGGG CAGCCCCGTC 
TACGTGGGGG GCAACTTCGT GGACTCGATG CCAGCCTCAG GCCCCATGTT CAACTTGGGG 
CACCTGCAGC ACCCCTCCTC CGCTAGCGTG GACTACAGCT GCGCCGCACA GATCCCCGGC 
GGCCACCACC ACGGACCTTG CGACCCCCAC CCTACCTACA CGGACCTCTC CTCTCACCAC 
ACCTCTCAGG GACGGATGCA GGAGGCGCCC AAGCTCACGC ATCTGTAG