LOC108280417 cDNA ORF clone, Ictalurus punctatus(channel catfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108280417
Entrez Gene ID	108280417
Full Name	ATP-binding cassette sub-family D member 3-like
Synonyms	Abcd3b
Gene Type	protein-coding
Organism	Ictalurus punctatus(channel catfish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017495366.1	XP_017350855.1	ATP-binding cassette sub-family D member 3-like

Pathways from BioSystems
Gene Ontology

The following LOC108280417 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108280417 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OIc18194	XM_017495366.1 Latest version!	Ictalurus punctatus ATP-binding cassette sub-family D member 3-like (LOC108280417), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108280417 ( XM_017495366.1 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> XP_017350855.1 Ictalurus punctatus ATP-binding cassette sub-family D member 3-like (LOC108280417), mRNA.

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CloneID	OIc18194
Clone ID Related Accession (Same CDS sequence)	XM_017495366.1
Accession Version	XM_017495366.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1983bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-05
Organism	Ictalurus punctatus(channel catfish)
Product	ATP-binding cassette sub-family D member 3-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030435.1) and transcript sequence (GEHJ01141348.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictalurus punctatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 213 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGCGGCTG TGAGTAAGTA CCTGACAGGC AGGAGCTGCT CCATCACAGG TGCTTTAGCC 
TTAATCTCTT TCTGTCTGCT CAAACACAGG CGACGAGCTT CACAGTTCAA TAACAGGTCT 
AACAGGAATT CAGACTCATC TCAGGATGGC AGGAAGGACA AAGCCACTGT GGATCAACTC 
TTCGTCTCTC GCATCTACAA GATCCTGAAG GTTTTGATTC CGCAGCTGTT CTGTAAAGAG 
TCGGGGTATC TGGTGCTCAT CGCTGCCATG CTTCTGGCTC GAACGTACTG CGATGTCTGG 
ATGATCCACA ACGGCACCAT GATCGAGAGT GCAATCATTG GACGATCAAC AAAAGCATTC 
AGAACCTATT TATTTAACTT CATGGCTGCT ATGCCACTTA TCTCATTAGT GAATAATTTT 
CTGAAACTGG GACTGAACAA GCTGAAGCTG TGCTTCCGTG TCAGGCTCAC AGATCACCTG 
TACACACACT ACCTCAGAGG CTTCACCTAC TACAAAATGG GGAATGTGGA TAATCGCATC 
ATGAATCCGG ACCAGCTGCT GACACAGGAT GTGGAACGGT TCTGTAACAG CGTGGTGGAC 
CTGTACTCCA ACATCAGCAA GCCTCTACTT GACATCGTCA TTTACCTCCT CAAACTGACC 
ACAGCATCCG GAGGCGAGGG CCCAGTTGCT TTGTTGAGTT ATCTGGTGTT CTCTGGTCTG 
TTGTTGACGT GGTTGCGGCG GCCGATCGGG AAAATGACTG CAACTGAACA GAAACATGAA 
GGAGAATTCA GATACACAAA CTCCCGGCTA ATTACTAACA GTGAGGAAAT AGCCTTCTAC 
AATGGTGGCC AAAGAGAAAA GATCAACATC CATCAAACTT TCCACAAACT GGTGGAACAT 
CTGAAGCGTT TTATCTGGTT CCGCTTCTCC GTTGGAGTTG TAGACAGCAT CGTGGCTAAG 
TACATCGCCT TCATGGTCGG ATACCTGGTG GTCAGTCGGC CATTTTTAGA CCCGACAAAC 
ACGCGCCATG ACCACAGCAC ACACGCCCAG AGACTGGAGG AGTATTATCA GAGTGGCAGG 
ATGTTAATCA GTATGGCTCA GGCTTTGGGG AGAATCGTTC TGGCGGGGAG AGAGATGAGC 
CGACTGTCAG GCTTCACATT GAGGATCAGT GAGATTCAGG ACGTGTTGAA GGATTTAAAC 
AGTGGCAGAT ATGAGCGCAG CTCCGTCGTC TCAGCAGGAG GAAAAGCTCC AGAGGAAGTG 
GAGAACTCGG CTCTGCTCCC CGGCACGGGA GACATTATTA TAGCTGATAA CATCATCAGG 
TTTGAACACG TGCCCCTGTT AACACCTACC GGAGACGTCC TGATCCGGGA TTTATCCTTC 
GAGGTGCTGT CAGGGGCGAA TGTGTTGGTG TGTGGTCCAA ACGGCTGTGG GAAGAGTTCA 
CTGTTCAGAG TTCTGGGAGA GTTGTGGCCT CTGTTTGGAG GGCGTCTCAC CAAACCACAC 
AGAGGGAAAC TCTTCTACAT CCCACAGAGA CCGTACATGA CTCTAGGTAC ACTCAGGGAT 
CAGGTGATTT ATCCCGACAC ACACAAGGAG CAAATCCGGA AAGGAATCTT GGATCAGGTG 
TTGAAGGATT ACCTGGATAA GGTGCAGCTG TCTCACATCC TGGAGAGAGA GAGAGAGAGT 
GGGTGGGAGA GCGAGCAGGA CTGGATGGAT GTTCTGAGTG GAGGAGAGAA ACAGAGGATG 
GCGATGGCTC GTCTGTTCTA CCACAAGCCT CAGTTCGCCA TTTTAGACGA GTGTACGAGC 
GCCGTGAGTG TGGACGTGGA GGATTACATC TACAGCCACT GCAGGAAGGT TGGAATCACA 
CTGTTCACTG TCTCACACAG GAAGTCACTG TGGAAACACC ACGAGTTTTA CCTTCACATG 
GATGGTAGAG GAGGTTATGA GTTCAAGCGC ATCACTGAGG ACACAGTGCA GTTCGGCTCC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017350855.1
CDS	142..2124
Translation	MAAVSKYLTGRSCSITGALALISFCLLKHRRRASQFNNRSNRNSDSSQDGRKDKATVDQLFVSRIYKILKVLIPQLFCKESGYLVLIAAMLLARTYCDVWMIHNGTMIESAIIGRSTKAFRTYLFNFMAAMPLISLVNNFLKLGLNKLKLCFRVRLTDHLYTHYLRGFTYYKMGNVDNRIMNPDQLLTQDVERFCNSVVDLYSNISKPLLDIVIYLLKLTTASGGEGPVALLSYLVFSGLLLTWLRRPIGKMTATEQKHEGEFRYTNSRLITNSEEIAFYNGGQREKINIHQTFHKLVEHLKRFIWFRFSVGVVDSIVAKYIAFMVGYLVVSRPFLDPTNTRHDHSTHAQRLEEYYQSGRMLISMAQALGRIVLAGREMSRLSGFTLRISEIQDVLKDLNSGRYERSSVVSAGGKAPEEVENSALLPGTGDIIIADNIIRFEHVPLLTPTGDVLIRDLSFEVLSGANVLVCGPNGCGKSSLFRVLGELWPLFGGRLTKPHRGKLFYIPQRPYMTLGTLRDQVIYPDTHKEQIRKGILDQVLKDYLDKVQLSHILERERESGWESEQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEFYLHMDGRGGYEFKRITEDTVQFGS

Target ORF information:

RefSeq Version	XM_017495366.1
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus ATP-binding cassette sub-family D member 3-like (LOC108280417), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017495366.1

ORF Insert Sequence:

ATGGCGGCTG TGAGTAAGTA CCTGACAGGC AGGAGCTGCT CCATCACAGG TGCTTTAGCC 
TTAATCTCTT TCTGTCTGCT CAAACACAGG CGACGAGCTT CACAGTTCAA TAACAGGTCT 
AACAGGAATT CAGACTCATC TCAGGATGGC AGGAAGGACA AAGCCACTGT GGATCAACTC 
TTCGTCTCTC GCATCTACAA GATCCTGAAG GTTTTGATTC CGCAGCTGTT CTGTAAAGAG 
TCGGGGTATC TGGTGCTCAT CGCTGCCATG CTTCTGGCTC GAACGTACTG CGATGTCTGG 
ATGATCCACA ACGGCACCAT GATCGAGAGT GCAATCATTG GACGATCAAC AAAAGCATTC 
AGAACCTATT TATTTAACTT CATGGCTGCT ATGCCACTTA TCTCATTAGT GAATAATTTT 
CTGAAACTGG GACTGAACAA GCTGAAGCTG TGCTTCCGTG TCAGGCTCAC AGATCACCTG 
TACACACACT ACCTCAGAGG CTTCACCTAC TACAAAATGG GGAATGTGGA TAATCGCATC 
ATGAATCCGG ACCAGCTGCT GACACAGGAT GTGGAACGGT TCTGTAACAG CGTGGTGGAC 
CTGTACTCCA ACATCAGCAA GCCTCTACTT GACATCGTCA TTTACCTCCT CAAACTGACC 
ACAGCATCCG GAGGCGAGGG CCCAGTTGCT TTGTTGAGTT ATCTGGTGTT CTCTGGTCTG 
TTGTTGACGT GGTTGCGGCG GCCGATCGGG AAAATGACTG CAACTGAACA GAAACATGAA 
GGAGAATTCA GATACACAAA CTCCCGGCTA ATTACTAACA GTGAGGAAAT AGCCTTCTAC 
AATGGTGGCC AAAGAGAAAA GATCAACATC CATCAAACTT TCCACAAACT GGTGGAACAT 
CTGAAGCGTT TTATCTGGTT CCGCTTCTCC GTTGGAGTTG TAGACAGCAT CGTGGCTAAG 
TACATCGCCT TCATGGTCGG ATACCTGGTG GTCAGTCGGC CATTTTTAGA CCCGACAAAC 
ACGCGCCATG ACCACAGCAC ACACGCCCAG AGACTGGAGG AGTATTATCA GAGTGGCAGG 
ATGTTAATCA GTATGGCTCA GGCTTTGGGG AGAATCGTTC TGGCGGGGAG AGAGATGAGC 
CGACTGTCAG GCTTCACATT GAGGATCAGT GAGATTCAGG ACGTGTTGAA GGATTTAAAC 
AGTGGCAGAT ATGAGCGCAG CTCCGTCGTC TCAGCAGGAG GAAAAGCTCC AGAGGAAGTG 
GAGAACTCGG CTCTGCTCCC CGGCACGGGA GACATTATTA TAGCTGATAA CATCATCAGG 
TTTGAACACG TGCCCCTGTT AACACCTACC GGAGACGTCC TGATCCGGGA TTTATCCTTC 
GAGGTGCTGT CAGGGGCGAA TGTGTTGGTG TGTGGTCCAA ACGGCTGTGG GAAGAGTTCA 
CTGTTCAGAG TTCTGGGAGA GTTGTGGCCT CTGTTTGGAG GGCGTCTCAC CAAACCACAC 
AGAGGGAAAC TCTTCTACAT CCCACAGAGA CCGTACATGA CTCTAGGTAC ACTCAGGGAT 
CAGGTGATTT ATCCCGACAC ACACAAGGAG CAAATCCGGA AAGGAATCTT GGATCAGGTG 
TTGAAGGATT ACCTGGATAA GGTGCAGCTG TCTCACATCC TGGAGAGAGA GAGAGAGAGT 
GGGTGGGAGA GCGAGCAGGA CTGGATGGAT GTTCTGAGTG GAGGAGAGAA ACAGAGGATG 
GCGATGGCTC GTCTGTTCTA CCACAAGCCT CAGTTCGCCA TTTTAGACGA GTGTACGAGC 
GCCGTGAGTG TGGACGTGGA GGATTACATC TACAGCCACT GCAGGAAGGT TGGAATCACA 
CTGTTCACTG TCTCACACAG GAAGTCACTG TGGAAACACC ACGAGTTTTA CCTTCACATG 
GATGGTAGAG GAGGTTATGA GTTCAAGCGC ATCACTGAGG ACACAGTGCA GTTCGGCTCC 
TGA