LOC108280216 cDNA ORF clone, Ictalurus punctatus(channel catfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108280216
Entrez Gene ID	108280216
Full Name	paired box protein Pax-3-like
Gene Type	protein-coding
Organism	Ictalurus punctatus(channel catfish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017495048.1	XP_017350537.1	paired box protein Pax-3-A-like isoform X1
XM_017495050.1	XP_017350539.1	paired box protein Pax-3-like isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC108280216 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108280216 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OIc17955	XM_017495048.1 Latest version!	Ictalurus punctatus paired box protein Pax-3-like (LOC108280216), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OIc17956	XM_017495050.1 Latest version!	Ictalurus punctatus paired box protein Pax-3-like (LOC108280216), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108280216 ( XM_017495048.1 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> XP_017350537.1 Ictalurus punctatus paired box protein Pax-3-like (LOC108280216), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OIc17955
Clone ID Related Accession (Same CDS sequence)	XM_017495048.1
Accession Version	XM_017495048.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1479bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-05
Organism	Ictalurus punctatus(channel catfish)
Product	paired box protein Pax-3-A-like isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030435.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictalurus punctatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCGCCT TAGCAGGGGG CATTCCCAGG ATGGTGCGCC CCACGCCACC CCAAAACTAC 
CCGAGAGGGG GCTATTCGCT GGAAGTTTCC ACACCATTAG GCCAGGGCCG AGTAAACCAG 
CTCGGCGGTG TTTTCATTAA CGGACGCCCG TTGCCAAACC ACATTCGCCA TAAGATCGTA 
GAAATGGCGC ATCACGGGAT CCGGCCGTGC GTCATCTCGC GCCAGCTGCG CGTCTCACAC 
GGCTGCGTGT CCAAAATCCT GTGCAGGTAC CAGGAAACGG GATCCATCCG GCCTGGCGCT 
ATCGGAGGTA GCAAACCGAA GCAGAACACC AGTCCCGATG TGGATAAGAA AATCGAGGAA 
TACAAGAGAG ATAACCCGGG AATGTTCAGT TGGGAGATCC GAGACAAGCT GCTGAAAGAC 
GGCATCTGTG ACAGAAACAA CGTGCCCTCA GTCAGCTCGA TCAGTCGCAT ACTGCGCTGT 
AAGTTTGGCG GAAATGGAGA GGATGAAGAG GACGATGATG AAGTTGAAAA GAGGGAGCTT 
GAGGAAAACG AAAGACGTGC GAAACACAGC ATTGATGGCA TTCTTGGAGA CAGATCGAGT 
CATTCGGACG AGGGTTCAGA TGTAGATTCA GAACCAGGTT TGCCCCTGAA GAGAAAACAG 
CGTCGCAGTC GCACAACATT CACTGCTGAG CAGCTTGAGG AGCTGGAGAG AGCTTTTGAG 
CGCACACACT ATCCCGACAT CTACACACGC GAGGAGCTCG CCCAAAGAGC CAAACTTACT 
GAGGCGAGAG TACAGGTGTG GTTTAGCAAC AGACGGGCTC GCTGGAGGAA GCAGGCAGGA 
GCCAATCAGC TGATGGCATT CAATCACCTG ATTCCTGGAG GATTCCCTCC ATCAGCCATG 
TCAAGCCTAC AGCCTTACCA GCTTCCAGAA AGTCCTTACT CTGCATCCTC CATCCCACAA 
GCAATGTCAG AACAGGCCAG CACAGTGCAC AGGCCCCAGC CTCTTCCTCC GACTTCAGTG 
CACCAGAGCA GTCTGGCCAC CGCCCCGGGA ACCCAGGACG CTACTTCAGC CTACTGCCTC 
TCTTCAGGCC GTCACGGCTT CTCAGGCTAC TCAGACAGCT TTGTGCCTGC ACCGAGTCAC 
TCTAACCCGG TCAACCCTGC TATCAGCAAT GGCCTCTCAA CACAGGTGAT GGGACTGTTG 
AACCCAGGAG GCGTGCCTCA CCAGCCGCAG GGAGACTTCT CTCTCTCCCC TCTCACTGGT 
CCTCTGGAGC CCAGTGCTGG CATGGCTGCC AGCTGCCACT CATCACAGAG ACTGGAGTCT 
CTGTCTGGAC TGGCTAGCAT GCCTTCTCTG CCCAGCTCAC AGTCTTACTG CCCACCCAGC 
TACAGCTCGC CAGCCTACAG CGTCGACCAT ATGGCACCAT ACCAATACAG CCAATATGGG 
CAAAGTGCCT TTCATTATCT GAAGCCCAAC ATCAGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017350537.1
CDS	291..1769
Translation	MAALAGGIPRMVRPTPPQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQNTSPDVDKKIEEYKRDNPGMFSWEIRDKLLKDGICDRNNVPSVSSISRILRCKFGGNGEDEEDDDEVEKRELEENERRAKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAMSSLQPYQLPESPYSASSIPQAMSEQASTVHRPQPLPPTSVHQSSLATAPGTQDATSAYCLSSGRHGFSGYSDSFVPAPSHSNPVNPAISNGLSTQVMGLLNPGGVPHQPQGDFSLSPLTGPLEPSAGMAASCHSSQRLESLSGLASMPSLPSSQSYCPPSYSSPAYSVDHMAPYQYSQYGQSAFHYLKPNIS

Target ORF information:

RefSeq Version	XM_017495048.1
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus paired box protein Pax-3-like (LOC108280216), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017495048.1

ORF Insert Sequence:

ATGGCCGCCT TAGCAGGGGG CATTCCCAGG ATGGTGCGCC CCACGCCACC CCAAAACTAC 
CCGAGAGGGG GCTATTCGCT GGAAGTTTCC ACACCATTAG GCCAGGGCCG AGTAAACCAG 
CTCGGCGGTG TTTTCATTAA CGGACGCCCG TTGCCAAACC ACATTCGCCA TAAGATCGTA 
GAAATGGCGC ATCACGGGAT CCGGCCGTGC GTCATCTCGC GCCAGCTGCG CGTCTCACAC 
GGCTGCGTGT CCAAAATCCT GTGCAGGTAC CAGGAAACGG GATCCATCCG GCCTGGCGCT 
ATCGGAGGTA GCAAACCGAA GCAGAACACC AGTCCCGATG TGGATAAGAA AATCGAGGAA 
TACAAGAGAG ATAACCCGGG AATGTTCAGT TGGGAGATCC GAGACAAGCT GCTGAAAGAC 
GGCATCTGTG ACAGAAACAA CGTGCCCTCA GTCAGCTCGA TCAGTCGCAT ACTGCGCTGT 
AAGTTTGGCG GAAATGGAGA GGATGAAGAG GACGATGATG AAGTTGAAAA GAGGGAGCTT 
GAGGAAAACG AAAGACGTGC GAAACACAGC ATTGATGGCA TTCTTGGAGA CAGATCGAGT 
CATTCGGACG AGGGTTCAGA TGTAGATTCA GAACCAGGTT TGCCCCTGAA GAGAAAACAG 
CGTCGCAGTC GCACAACATT CACTGCTGAG CAGCTTGAGG AGCTGGAGAG AGCTTTTGAG 
CGCACACACT ATCCCGACAT CTACACACGC GAGGAGCTCG CCCAAAGAGC CAAACTTACT 
GAGGCGAGAG TACAGGTGTG GTTTAGCAAC AGACGGGCTC GCTGGAGGAA GCAGGCAGGA 
GCCAATCAGC TGATGGCATT CAATCACCTG ATTCCTGGAG GATTCCCTCC ATCAGCCATG 
TCAAGCCTAC AGCCTTACCA GCTTCCAGAA AGTCCTTACT CTGCATCCTC CATCCCACAA 
GCAATGTCAG AACAGGCCAG CACAGTGCAC AGGCCCCAGC CTCTTCCTCC GACTTCAGTG 
CACCAGAGCA GTCTGGCCAC CGCCCCGGGA ACCCAGGACG CTACTTCAGC CTACTGCCTC 
TCTTCAGGCC GTCACGGCTT CTCAGGCTAC TCAGACAGCT TTGTGCCTGC ACCGAGTCAC 
TCTAACCCGG TCAACCCTGC TATCAGCAAT GGCCTCTCAA CACAGGTGAT GGGACTGTTG 
AACCCAGGAG GCGTGCCTCA CCAGCCGCAG GGAGACTTCT CTCTCTCCCC TCTCACTGGT 
CCTCTGGAGC CCAGTGCTGG CATGGCTGCC AGCTGCCACT CATCACAGAG ACTGGAGTCT 
CTGTCTGGAC TGGCTAGCAT GCCTTCTCTG CCCAGCTCAC AGTCTTACTG CCCACCCAGC 
TACAGCTCGC CAGCCTACAG CGTCGACCAT ATGGCACCAT ACCAATACAG CCAATATGGG 
CAAAGTGCCT TTCATTATCT GAAGCCCAAC ATCAGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC108280216 ( XM_017495050.1 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> XP_017350539.1 Ictalurus punctatus paired box protein Pax-3-like (LOC108280216), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OIc17956
Clone ID Related Accession (Same CDS sequence)	XM_017495050.1
Accession Version	XM_017495050.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1467bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-05
Organism	Ictalurus punctatus(channel catfish)
Product	paired box protein Pax-3-like isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030435.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictalurus punctatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCGCCT TAGCAGGGGG CATTCCCAGG ATGGTGCGCC CCACGCCACC CCAAAACTAC 
CCGAGAGGGG GCTATTCGCT GGAAGTTTCC ACACCATTAG GCCAGGGCCG AGTAAACCAG 
CTCGGCGGTG TTTTCATTAA CGGACGCCCG TTGCCAAACC ACATTCGCCA TAAGATCGTA 
GAAATGGCGC ATCACGGGAT CCGGCCGTGC GTCATCTCGC GCCAGCTGCG CGTCTCACAC 
GGCTGCGTGT CCAAAATCCT GTGCAGGTAC CAGGAAACGG GATCCATCCG GCCTGGCGCT 
ATCGGAGGTA GCAAACCGAA GCAGAACACC AGTCCCGATG TGGATAAGAA AATCGAGGAA 
TACAAGAGAG ATAACCCGGG AATGTTCAGT TGGGAGATCC GAGACAAGCT GCTGAAAGAC 
GGCATCTGTG ACAGAAACAA CGTGCCCTCA GTCAGCTCGA TCAGTCGCAT ACTGCGCTGT 
AAGTTTGGCG GAAATGGAGA GGATGAAGAG GACGATGATG AAGTTGAAAA GAGGGAGCTT 
GAGGAAAACG AAAGACGTGC GAAACACAGC ATTGATGGCA TTCTTGGAGA CAGATCGAGT 
CATTCGGACG AGGGTTCAGA TGTAGATTCA GAACCAGGTT TGCCCCTGAA GAGAAAACAG 
CGTCGCAGTC GCACAACATT CACTGCTGAG CAGCTTGAGG AGCTGGAGAG AGCTTTTGAG 
CGCACACACT ATCCCGACAT CTACACACGC GAGGAGCTCG CCCAAAGAGC CAAACTTACT 
GAGGCGAGAG TACAGGTGTG GTTTAGCAAC AGACGGGCTC GCTGGAGGAA GCAGGCAGGA 
GCCAATCAGC TGATGGCATT CAATCACCTG ATTCCTGGAG GATTCCCTCC ATCAGCCATG 
TCAAGCCTAC AGCCTTACCA GCTTCCAGAA AGTCCTTACT CTGCATCCTC CATCCCACAA 
GCAATGTCAG AACAGGCCAG CACAGTGCAC AGGCCCCAGC CTCTTCCTCC GACTTCAGTG 
CACCAGAGCA GTCTGGCCAC CGCCCCGGGA ACCCAGGACG CTACTTCAGC CTACTGCCTC 
TCTTCAGGCC GTCACGGCTT CTCAGGCTAC TCAGACAGCT TTGTGCCTGC ACCGAGTCAC 
TCTAACCCGG TCAACCCTGC TATCAGCAAT GGCCTCTCAA CACAGGTGAT GGGACTGTTG 
AACCCAGGAG GCGTGCCTCA CCAGCCGCAG GGAGACTTCT CTCTCTCCCC TCTCACTGGT 
CCTCTGGAGC CCAGTGCTGG CATGGCTGCC AGCTGCCACT CATCACAGAG ACTGGAGTCT 
CTGTCTGGAC TGGCTAGCAT GCCTTCTCTG CCCAGCTCAC AGTCTTACTG CCCACCCAGC 
TACAGCTCGC CAGCCTACAG CGTCGACCAT ATGGCACCAT ACCAATACAG CCAATATGGG 
CAAAGTAAGG TGCCTTTCAT TATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017350539.1
CDS	291..1757
Translation	MAALAGGIPRMVRPTPPQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQNTSPDVDKKIEEYKRDNPGMFSWEIRDKLLKDGICDRNNVPSVSSISRILRCKFGGNGEDEEDDDEVEKRELEENERRAKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAMSSLQPYQLPESPYSASSIPQAMSEQASTVHRPQPLPPTSVHQSSLATAPGTQDATSAYCLSSGRHGFSGYSDSFVPAPSHSNPVNPAISNGLSTQVMGLLNPGGVPHQPQGDFSLSPLTGPLEPSAGMAASCHSSQRLESLSGLASMPSLPSSQSYCPPSYSSPAYSVDHMAPYQYSQYGQSKVPFII

Target ORF information:

RefSeq Version	XM_017495050.1
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus paired box protein Pax-3-like (LOC108280216), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017495050.1

ORF Insert Sequence:

ATGGCCGCCT TAGCAGGGGG CATTCCCAGG ATGGTGCGCC CCACGCCACC CCAAAACTAC 
CCGAGAGGGG GCTATTCGCT GGAAGTTTCC ACACCATTAG GCCAGGGCCG AGTAAACCAG 
CTCGGCGGTG TTTTCATTAA CGGACGCCCG TTGCCAAACC ACATTCGCCA TAAGATCGTA 
GAAATGGCGC ATCACGGGAT CCGGCCGTGC GTCATCTCGC GCCAGCTGCG CGTCTCACAC 
GGCTGCGTGT CCAAAATCCT GTGCAGGTAC CAGGAAACGG GATCCATCCG GCCTGGCGCT 
ATCGGAGGTA GCAAACCGAA GCAGAACACC AGTCCCGATG TGGATAAGAA AATCGAGGAA 
TACAAGAGAG ATAACCCGGG AATGTTCAGT TGGGAGATCC GAGACAAGCT GCTGAAAGAC 
GGCATCTGTG ACAGAAACAA CGTGCCCTCA GTCAGCTCGA TCAGTCGCAT ACTGCGCTGT 
AAGTTTGGCG GAAATGGAGA GGATGAAGAG GACGATGATG AAGTTGAAAA GAGGGAGCTT 
GAGGAAAACG AAAGACGTGC GAAACACAGC ATTGATGGCA TTCTTGGAGA CAGATCGAGT 
CATTCGGACG AGGGTTCAGA TGTAGATTCA GAACCAGGTT TGCCCCTGAA GAGAAAACAG 
CGTCGCAGTC GCACAACATT CACTGCTGAG CAGCTTGAGG AGCTGGAGAG AGCTTTTGAG 
CGCACACACT ATCCCGACAT CTACACACGC GAGGAGCTCG CCCAAAGAGC CAAACTTACT 
GAGGCGAGAG TACAGGTGTG GTTTAGCAAC AGACGGGCTC GCTGGAGGAA GCAGGCAGGA 
GCCAATCAGC TGATGGCATT CAATCACCTG ATTCCTGGAG GATTCCCTCC ATCAGCCATG 
TCAAGCCTAC AGCCTTACCA GCTTCCAGAA AGTCCTTACT CTGCATCCTC CATCCCACAA 
GCAATGTCAG AACAGGCCAG CACAGTGCAC AGGCCCCAGC CTCTTCCTCC GACTTCAGTG 
CACCAGAGCA GTCTGGCCAC CGCCCCGGGA ACCCAGGACG CTACTTCAGC CTACTGCCTC 
TCTTCAGGCC GTCACGGCTT CTCAGGCTAC TCAGACAGCT TTGTGCCTGC ACCGAGTCAC 
TCTAACCCGG TCAACCCTGC TATCAGCAAT GGCCTCTCAA CACAGGTGAT GGGACTGTTG 
AACCCAGGAG GCGTGCCTCA CCAGCCGCAG GGAGACTTCT CTCTCTCCCC TCTCACTGGT 
CCTCTGGAGC CCAGTGCTGG CATGGCTGCC AGCTGCCACT CATCACAGAG ACTGGAGTCT 
CTGTCTGGAC TGGCTAGCAT GCCTTCTCTG CCCAGCTCAC AGTCTTACTG CCCACCCAGC 
TACAGCTCGC CAGCCTACAG CGTCGACCAT ATGGCACCAT ACCAATACAG CCAATATGGG 
CAAAGTAAGG TGCCTTTCAT TATCTGA