mrpl15 cDNA ORF clone, Ictalurus punctatus(channel catfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	mrpl15
Entrez Gene ID	100528380
Full Name	mitochondrial ribosomal protein L15
Synonyms	rm15
Gene Type	protein-coding
Organism	Ictalurus punctatus(channel catfish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001200650.2	NP_001187579.1	39S ribosomal protein L15, mitochondrial

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.
Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, Lu J, Zhang J, Jiang Y, Zhang H, Wang X, Rajendran KV, Khoo L, Kucuktas H, Peatman E, Liu Z
BMC genomics13595(2012 Nov)

Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus).
Chen F, Lee Y, Jiang Y, Wang S, Peatman E, Abernathy J, Liu H, Liu S, Kucuktas H, Ke C, Liu Z
PloS one5(7)e11546(2010 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following mrpl15 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the mrpl15 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OIc38877	NM_001200650.2 Latest version!	Ictalurus punctatus mitochondrial ribosomal protein L15 (mrpl15), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

mrpl15 ( NM_001200650.2 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> NP_001187579.1 Ictalurus punctatus mitochondrial ribosomal protein L15 (mrpl15), mRNA.

Price & Availability↑

CloneID	OIc38877
Clone ID Related Accession (Same CDS sequence)	NM_001200650.2
Accession Version	NM_001200650.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 891bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-05-04
Organism	Ictalurus punctatus(channel catfish)
Product	39S ribosomal protein L15, mitochondrial
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from GU588889.1. On Jul 7, 2016 this sequence version replaced NM_001200650.1. ##Evidence-Data-START## Transcript exon combination :: GU588889.1, JT409043.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00116755, SAMN00739092 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END##

ATGTCTGTGT CCAAGACCAC AGGTGGTAAA AGTATAGACA TTTTAAGAAA TTTACCACGG 
ATAACCCTAG CTAACCTTCG GCCAAATCTT GGTGCAAGGA AAAATGAAAA GCGTCGGGGC 
CGGGGGATGC ATGGTGGGAA TAAAAGCGGA CGGGGTCACA AAGGTGAGCG GCAGCGTGGT 
AATCGTCCCC GCCTAGGCTT TGAAGGAGGC CAAACCCCAT TCTACCTGCT CATTCCTAAA 
TATGGCTACA ATGAGGGACA CAGCCGTCGC CAGCAGTACC CGCCACTCAC TCTGAGGAGG 
CTGCAGTATT TAATAGACCT TGGCCGTGTG GATCCGTCCC AGCCCATAGA CCTCACGCAG 
CTGGTCAACG GCAGAGGAGT CACGATCCAA CCGCTCAAAC GTGATTATGG GGTCCACCTA 
GTAGAAGAGG GAGCTGACAT CTTCTGTGCT AAGGTGAATC TGGAGGTTCA GCGTGCTTCT 
GAAGCTGCCA TTGCTGCAGT GGAACGCAAT GGTGGTGTAA TCTCAACCAG CTACTATGAC 
CCTCGCAGCC TAGAAATCCT TGTCAAACCA GTGCCATTCT TCATGACCGG CCAGCCCATT 
CCTAAGCGGA TGCTTCCCGG TGAAGACCTC CTTCCATACT ACGTGGATGC TAATAACCGT 
GGTTATCTTG CTGATCCAGA GCAGATCCAG GCCGCTCGGC TTGCACTGGC AAAGAAATAC 
GGCTACACAT TACCAGACGT ATCAACGGAA GCAATATGCA AAATGTTAGC AGAGAGGAAG 
GACCCGCGAC AGATCTTTTT TGGTTTGGCC CCAGGCTGGG TAGTAAATTT GGCAGAGAAA 
AAGATCCTTA AACCCACTGA CAAGGATGTA TTGAAGTACT ACAGTTCATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001187579.1
CDS	35..925
Translation	MSVSKTTGGKSIDILRNLPRITLANLRPNLGARKNEKRRGRGMHGGNKSGRGHKGERQRGNRPRLGFEGGQTPFYLLIPKYGYNEGHSRRQQYPPLTLRRLQYLIDLGRVDPSQPIDLTQLVNGRGVTIQPLKRDYGVHLVEEGADIFCAKVNLEVQRASEAAIAAVERNGGVISTSYYDPRSLEILVKPVPFFMTGQPIPKRMLPGEDLLPYYVDANNRGYLADPEQIQAARLALAKKYGYTLPDVSTEAICKMLAERKDPRQIFFGLAPGWVVNLAEKKILKPTDKDVLKYYSS

Target ORF information:

RefSeq Version	NM_001200650.2
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus mitochondrial ribosomal protein L15 (mrpl15), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001200650.2

ORF Insert Sequence:

ATGTCTGTGT CCAAGACCAC AGGTGGTAAA AGTATAGACA TTTTAAGAAA TTTACCACGG 
ATAACCCTAG CTAACCTTCG GCCAAATCTT GGTGCAAGGA AAAATGAAAA GCGTCGGGGC 
CGGGGGATGC ATGGTGGGAA TAAAAGCGGA CGGGGTCACA AAGGTGAGCG GCAGCGTGGT 
AATCGTCCCC GCCTAGGCTT TGAAGGAGGC CAAACCCCAT TCTACCTGCT CATTCCTAAA 
TATGGCTACA ATGAGGGACA CAGCCGTCGC CAGCAGTACC CGCCACTCAC TCTGAGGAGG 
CTGCAGTATT TAATAGACCT TGGCCGTGTG GATCCGTCCC AGCCCATAGA CCTCACGCAG 
CTGGTCAACG GCAGAGGAGT CACGATCCAA CCGCTCAAAC GTGATTATGG GGTCCACCTA 
GTAGAAGAGG GAGCTGACAT CTTCTGTGCT AAGGTGAATC TGGAGGTTCA GCGTGCTTCT 
GAAGCTGCCA TTGCTGCAGT GGAACGCAAT GGTGGTGTAA TCTCAACCAG CTACTATGAC 
CCTCGCAGCC TAGAAATCCT TGTCAAACCA GTGCCATTCT TCATGACCGG CCAGCCCATT 
CCTAAGCGGA TGCTTCCCGG TGAAGACCTC CTTCCATACT ACGTGGATGC TAATAACCGT 
GGTTATCTTG CTGATCCAGA GCAGATCCAG GCCGCTCGGC TTGCACTGGC AAAGAAATAC 
GGCTACACAT TACCAGACGT ATCAACGGAA GCAATATGCA AAATGTTAGC AGAGAGGAAG 
GACCCGCGAC AGATCTTTTT TGGTTTGGCC CCAGGCTGGG TAGTAAATTT GGCAGAGAAA 
AAGATCCTTA AACCCACTGA CAAGGATGTA TTGAAGTACT ACAGTTCATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.
BMC genomics13595(2012 Nov)
Liu S,Zhang Y,Zhou Z,Waldbieser G,Sun F,Lu J,Zhang J,Jiang Y,Zhang H,Wang X,Rajendran KV,Khoo L,Kucuktas H,Peatman E,Liu Z

Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus).
PloS one5(7)e11546(2010 Jul)
Chen F,Lee Y,Jiang Y,Wang S,Peatman E,Abernathy J,Liu H,Liu S,Kucuktas H,Ke C,Liu Z