il1b cDNA ORF clone, Ictalurus punctatus(channel catfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	il1b
Entrez Gene ID	100304697
Full Name	interleukin 1, beta
Synonyms	il-1b
Gene Type	protein-coding
Organism	Ictalurus punctatus(channel catfish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001200220.1	NP_001187149.1	interleukin-1 beta

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.
Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, Lu J, Zhang J, Jiang Y, Zhang H, Wang X, Rajendran KV, Khoo L, Kucuktas H, Peatman E, Liu Z
BMC genomics13595(2012 Nov)

Genomic organization, gene duplication, and expression analysis of interleukin-1beta in channel catfish (Ictalurus punctatus).
Wang Y, Wang Q, Baoprasertkul P, Peatman E, Liu Z
Molecular immunology43(10)1653-64(2006 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following il1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the il1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OIc39765	NM_001200220.1 Latest version!	Ictalurus punctatus interleukin 1, beta (il1b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

il1b ( NM_001200220.1 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> NP_001187149.1 Ictalurus punctatus interleukin 1, beta (il1b), mRNA.

Price & Availability↑

CloneID	OIc39765
Clone ID Related Accession (Same CDS sequence)	NM_001200220.1
Accession Version	NM_001200220.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 843bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-05-03
Organism	Ictalurus punctatus(channel catfish)
Product	interleukin-1 beta
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ157742.1. ##Evidence-Data-START## Transcript exon combination :: DQ157742.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00739092, SAMN00740393 [ECO:0000348] ##Evidence-Data-END##

ATGGATGACA AAGATTTGTT AACGCTGGAA AGGTCCTTTG ACAGTGACTG TGGATTTGAT 
TCAGATGCCA TGGATTTTGA TGAGCTGGAC TGCTCTGATC CATTGGCCAT GAGTGGCAGA 
TGTGACCTGC ACGAAGGACT CCGCATCGAG GTCACCAAGG AGCCTCTTAG TATGCGCCAA 
GTTGCTAATG TTGTAATCGC TCTGCAGAGG CTGAAACTCA CTCAAAATAT TCAGTCCACG 
GAGTTCACCG ACCAGGAACT TTTCAATGTC TTCATTGAGA ATGTGATTGA AGAGAGCATG 
GTGATCAATT TGAAGTGCAC TGAATCCAAG AGTTACAGCC TGCAAGACAA GGTTGTGCGG 
TGCACTATAT GTGACAAGTC TAAAAGGGCT TTGGTGCAGA GGGAAAAGCT TCCTATTCTG 
CTGGCCTTTA CTCTGAAGGG TGGAAACAAG GATAATAAAG CATGGTTCAA CCTCTCGGCC 
TACACTCCAC CAAACTGCAC AGAAAACACG AAAGGACAGC CTGTATGTTT GGGGATTGTA 
AAGACCAATC TCTTTCTCTC ATGCACACTG GAGAATGAAA CTCCTTTTCT TGGCTTAGAG 
GAGGTAAAAG ACAAAGAGAG ACTGAAGTCC ATCCAGGAGA ATGATGGCAT GGAACGCTTC 
CTTTTCTTCA GAAACGGCAC TGGTGACTCC CTTAACACCT TCGAGTCGGT CAAATACCCG 
GGCTGGTTCA TCACCACCTC AAAGGAGGAC TATAAGCCAG TGCAAATGTG TAAGCAGCAA 
TCCAGTCACC TCCAGCTGTT CACACTCCAT GATGAGACTG TAGTCTCTCA GAATGAGATC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001187149.1
CDS	62..904
Translation	MDDKDLLTLERSFDSDCGFDSDAMDFDELDCSDPLAMSGRCDLHEGLRIEVTKEPLSMRQVANVVIALQRLKLTQNIQSTEFTDQELFNVFIENVIEESMVINLKCTESKSYSLQDKVVRCTICDKSKRALVQREKLPILLAFTLKGGNKDNKAWFNLSAYTPPNCTENTKGQPVCLGIVKTNLFLSCTLENETPFLGLEEVKDKERLKSIQENDGMERFLFFRNGTGDSLNTFESVKYPGWFITTSKEDYKPVQMCKQQSSHLQLFTLHDETVVSQNEI

Target ORF information:

RefSeq Version	NM_001200220.1
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus interleukin 1, beta (il1b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001200220.1

ORF Insert Sequence:

ATGGATGACA AAGATTTGTT AACGCTGGAA AGGTCCTTTG ACAGTGACTG TGGATTTGAT 
TCAGATGCCA TGGATTTTGA TGAGCTGGAC TGCTCTGATC CATTGGCCAT GAGTGGCAGA 
TGTGACCTGC ACGAAGGACT CCGCATCGAG GTCACCAAGG AGCCTCTTAG TATGCGCCAA 
GTTGCTAATG TTGTAATCGC TCTGCAGAGG CTGAAACTCA CTCAAAATAT TCAGTCCACG 
GAGTTCACCG ACCAGGAACT TTTCAATGTC TTCATTGAGA ATGTGATTGA AGAGAGCATG 
GTGATCAATT TGAAGTGCAC TGAATCCAAG AGTTACAGCC TGCAAGACAA GGTTGTGCGG 
TGCACTATAT GTGACAAGTC TAAAAGGGCT TTGGTGCAGA GGGAAAAGCT TCCTATTCTG 
CTGGCCTTTA CTCTGAAGGG TGGAAACAAG GATAATAAAG CATGGTTCAA CCTCTCGGCC 
TACACTCCAC CAAACTGCAC AGAAAACACG AAAGGACAGC CTGTATGTTT GGGGATTGTA 
AAGACCAATC TCTTTCTCTC ATGCACACTG GAGAATGAAA CTCCTTTTCT TGGCTTAGAG 
GAGGTAAAAG ACAAAGAGAG ACTGAAGTCC ATCCAGGAGA ATGATGGCAT GGAACGCTTC 
CTTTTCTTCA GAAACGGCAC TGGTGACTCC CTTAACACCT TCGAGTCGGT CAAATACCCG 
GGCTGGTTCA TCACCACCTC AAAGGAGGAC TATAAGCCAG TGCAAATGTG TAAGCAGCAA 
TCCAGTCACC TCCAGCTGTT CACACTCCAT GATGAGACTG TAGTCTCTCA GAATGAGATC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.
BMC genomics13595(2012 Nov)
Liu S,Zhang Y,Zhou Z,Waldbieser G,Sun F,Lu J,Zhang J,Jiang Y,Zhang H,Wang X,Rajendran KV,Khoo L,Kucuktas H,Peatman E,Liu Z

Genomic organization, gene duplication, and expression analysis of interleukin-1beta in channel catfish (Ictalurus punctatus).
Molecular immunology43(10)1653-64(2006 Apr)
Wang Y,Wang Q,Baoprasertkul P,Peatman E,Liu Z