LOC100211148 cDNA ORF clone, Hydra vulgaris

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100211148
Entrez Gene ID	100211148
Full Name	caspase recruitment domain-containing protein 11-like
Gene Type	protein-coding
Organism	Hydra vulgaris

mRNA and Protein(s)

mRNA	Protein	Name
XM_012702340.1	XP_012557794.1	caspase recruitment domain-containing protein 11-like

Pathways from BioSystems
Gene Ontology

The following LOC100211148 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100211148 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OHc17222	XM_012702340.1 Latest version!	Hydra vulgaris caspase recruitment domain-containing protein 11-like (LOC100211148), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100211148 ( XM_012702340.1 ) cDNA ORF clone, Hydra vulgaris -> XP_012557794.1 Hydra vulgaris caspase recruitment domain-containing protein 11-like (LOC100211148), mRNA.

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CloneID	OHc17222
Clone ID Related Accession (Same CDS sequence)	XM_012702340.1
Accession Version	XM_012702340.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1860bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-06-07
Organism	Hydra vulgaris
Product	caspase recruitment domain-containing protein 11-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004168522.1) and transcript sequence (GAOL01023411.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Hydra vulgaris Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases assembly gap :: added 36 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGTTAGCGA ACGATATGGA AGAAGAACTT GATTATAGAA ATCTTCTGGA AAAAAACCGT 
GTGGAAGTCA TAAAGTGTTT GAACCTAGAC CGACAGTTTT TATTTAGTTA CTTACGAAGT 
CATTCAGTAT TAGATGACGA GGATTGTGAG ATAATTTTAA ATGCTGGTGC AAGTCGTCAA 
CAAAAATGTT CAAAGTTTCT AGATGTCTTA TCAACTCGAG GTCCACGTGC TATTGAGTAT 
TTTATACAAG CCCTAGAAAT CGACCATGAA TATTTGTATG AAGTTATTAC TGGAAAGAAA 
CCACTAAATC AACCATTGTC ATCAAATTAT GTGGTACCCT TAAAACCAGT TTTGTCAGAA 
AAAGAGTTAC ATGAACACAA GCGAGAATAC CTCTTAAATG AACTGACAAA ACTTGCAGAA 
GAAAACCGAA ATCACGCTTA CTTGTACTCC AAAACACTTA CAGAAAAAAA CGTTTTAGAA 
AAACGTTTGA ATGATTTAAA AGAAGAATTG ATTGAAAAAG AAAAGATAAT AAACAGTCTG 
GAAGAAGATA TAAAACTTAA GAGCCTAAAT AATTGCTCTA AGTTGTACAG CCATCATTTT 
AGGGAGATGT TAATTGAAAA CGCAGATAAA AGTAATGTTA TTATTGGGTT ACAAGCACGT 
CTTCTTTTAC TTAAAGAAAG AAACGAAATT ATATCTTATA ACAATGTTGA GTTGGTTAAG 
AAAAACGAAG ACCTAATGAA TCAAATAAAA GATCTTGCTA TTAAATACGA TTTCAAAAGA 
TTAGAGTCCA AGCGTCTATC TCTGCAAATA AACTTAAACT GTGACAGTTT AAAAGCTGCT 
TCGGATTGCA AAAAAGAAAT TTATTCTCTG AAATTCAAAC TTATTCAAGC CAATGAAGAA 
AAAAATTATG CTGAAAAAAA ATTCGAGGAA GCACAAAAAG TAATATCTGA CATGAAATTG 
CAATTAGAAC TTTTACAAAA TAAAAGTTAC AAAAGCGAGA AAAAAGAGGT ATCACTAAGC 
CATTTGGAAT TGGAAGAAGA AATAAGTAAC ATGAAATTAA TTCATGAAAA GCAAAAGAAA 
AAAATTGAAG GTCTTGAAAG AAAAATTAGT CGGCTTGATC AAGAAATTGA AACACACAAG 
GAGGAAAAAG CATTTTACTT GACAGAACGC CAACAAGCTA TATGTGATAG AAACCGAATA 
GAAGAAGAAA GGAACGAGTT GCAAAAACAT AACAAAGTCT TACAAGATTT AAAAGAAGAG 
ACTGTACAAA AACAAATAAA AATATCTTCT CATTATGAAA AAAAAAACAA AGAGCTCTCT 
TCAGAATTAG ATAAAAAAAA AGAAGAGTTA GCTTTAAAAA TAAATGAAAT AAATTTGTTA 
AAAAACATCA ATCAAGCAAA AGATGATGAA GACACAGAAG CAAAAGCAAA TCTAAAAAAT 
GAGAATTTGC ATAAAAGCAT TCAATGTTTA CCTGCAAATA CTAACAAAAA TGAGGTTAAT 
AAAAGTAATG AGCAAGTTTT AAGACAAAAT TCTGAGTTTG AATCAGTAAA TATAAGCGAG 
AGTGAGAAGA ACGAAAACAC GGAGAATAAC GAAAACAATG AGAACAATGT GGTTAACACA 
AGCATTGCAA CAAGCCATAA TCCTAACCAA CAAATATTTG AGTACGATGG CAGTCACGTA 
TATAAAATGT TTAAAGAACA GAAATCAGCA GCGGCAGCTT TGCTGATGGC TGTACCTTTG 
TTTGGGGCTG CAACTTTATT TAGTGGTAAA GAACCAAACA ACCACGTTAC TGAAGAAAAT 
AATTCACAGC AAAAAACAAA TTTTGATAAA ACAAAGCAAA ATTTTTCACA AACTCTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012557794.1
CDS	107..1966
Translation	MLANDMEEELDYRNLLEKNRVEVIKCLNLDRQFLFSYLRSHSVLDDEDCEIILNAGASRQQKCSKFLDVLSTRGPRAIEYFIQALEIDHEYLYEVITGKKPLNQPLSSNYVVPLKPVLSEKELHEHKREYLLNELTKLAEENRNHAYLYSKTLTEKNVLEKRLNDLKEELIEKEKIINSLEEDIKLKSLNNCSKLYSHHFREMLIENADKSNVIIGLQARLLLLKERNEIISYNNVELVKKNEDLMNQIKDLAIKYDFKRLESKRLSLQINLNCDSLKAASDCKKEIYSLKFKLIQANEEKNYAEKKFEEAQKVISDMKLQLELLQNKSYKSEKKEVSLSHLELEEEISNMKLIHEKQKKKIEGLERKISRLDQEIETHKEEKAFYLTERQQAICDRNRIEEERNELQKHNKVLQDLKEETVQKQIKISSHYEKKNKELSSELDKKKEELALKINEINLLKNINQAKDDEDTEAKANLKNENLHKSIQCLPANTNKNEVNKSNEQVLRQNSEFESVNISESEKNENTENNENNENNVVNTSIATSHNPNQQIFEYDGSHVYKMFKEQKSAAAALLMAVPLFGAATLFSGKEPNNHVTEENNSQQKTNFDKTKQNFSQTL

Target ORF information:

RefSeq Version	XM_012702340.1
Organism	Hydra vulgaris
Definition	Hydra vulgaris caspase recruitment domain-containing protein 11-like (LOC100211148), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012702340.1

ORF Insert Sequence:

ATGTTAGCGA ACGATATGGA AGAAGAACTT GATTATAGAA ATCTTCTGGA AAAAAACCGT 
GTGGAAGTCA TAAAGTGTTT GAACCTAGAC CGACAGTTTT TATTTAGTTA CTTACGAAGT 
CATTCAGTAT TAGATGACGA GGATTGTGAG ATAATTTTAA ATGCTGGTGC AAGTCGTCAA 
CAAAAATGTT CAAAGTTTCT AGATGTCTTA TCAACTCGAG GTCCACGTGC TATTGAGTAT 
TTTATACAAG CCCTAGAAAT CGACCATGAA TATTTGTATG AAGTTATTAC TGGAAAGAAA 
CCACTAAATC AACCATTGTC ATCAAATTAT GTGGTACCCT TAAAACCAGT TTTGTCAGAA 
AAAGAGTTAC ATGAACACAA GCGAGAATAC CTCTTAAATG AACTGACAAA ACTTGCAGAA 
GAAAACCGAA ATCACGCTTA CTTGTACTCC AAAACACTTA CAGAAAAAAA CGTTTTAGAA 
AAACGTTTGA ATGATTTAAA AGAAGAATTG ATTGAAAAAG AAAAGATAAT AAACAGTCTG 
GAAGAAGATA TAAAACTTAA GAGCCTAAAT AATTGCTCTA AGTTGTACAG CCATCATTTT 
AGGGAGATGT TAATTGAAAA CGCAGATAAA AGTAATGTTA TTATTGGGTT ACAAGCACGT 
CTTCTTTTAC TTAAAGAAAG AAACGAAATT ATATCTTATA ACAATGTTGA GTTGGTTAAG 
AAAAACGAAG ACCTAATGAA TCAAATAAAA GATCTTGCTA TTAAATACGA TTTCAAAAGA 
TTAGAGTCCA AGCGTCTATC TCTGCAAATA AACTTAAACT GTGACAGTTT AAAAGCTGCT 
TCGGATTGCA AAAAAGAAAT TTATTCTCTG AAATTCAAAC TTATTCAAGC CAATGAAGAA 
AAAAATTATG CTGAAAAAAA ATTCGAGGAA GCACAAAAAG TAATATCTGA CATGAAATTG 
CAATTAGAAC TTTTACAAAA TAAAAGTTAC AAAAGCGAGA AAAAAGAGGT ATCACTAAGC 
CATTTGGAAT TGGAAGAAGA AATAAGTAAC ATGAAATTAA TTCATGAAAA GCAAAAGAAA 
AAAATTGAAG GTCTTGAAAG AAAAATTAGT CGGCTTGATC AAGAAATTGA AACACACAAG 
GAGGAAAAAG CATTTTACTT GACAGAACGC CAACAAGCTA TATGTGATAG AAACCGAATA 
GAAGAAGAAA GGAACGAGTT GCAAAAACAT AACAAAGTCT TACAAGATTT AAAAGAAGAG 
ACTGTACAAA AACAAATAAA AATATCTTCT CATTATGAAA AAAAAAACAA AGAGCTCTCT 
TCAGAATTAG ATAAAAAAAA AGAAGAGTTA GCTTTAAAAA TAAATGAAAT AAATTTGTTA 
AAAAACATCA ATCAAGCAAA AGATGATGAA GACACAGAAG CAAAAGCAAA TCTAAAAAAT 
GAGAATTTGC ATAAAAGCAT TCAATGTTTA CCTGCAAATA CTAACAAAAA TGAGGTTAAT 
AAAAGTAATG AGCAAGTTTT AAGACAAAAT TCTGAGTTTG AATCAGTAAA TATAAGCGAG 
AGTGAGAAGA ACGAAAACAC GGAGAATAAC GAAAACAATG AGAACAATGT GGTTAACACA 
AGCATTGCAA CAAGCCATAA TCCTAACCAA CAAATATTTG AGTACGATGG CAGTCACGTA 
TATAAAATGT TTAAAGAACA GAAATCAGCA GCGGCAGCTT TGCTGATGGC TGTACCTTTG 
TTTGGGGCTG CAACTTTATT TAGTGGTAAA GAACCAAACA ACCACGTTAC TGAAGAAAAT 
AATTCACAGC AAAAAACAAA TTTTGATAAA ACAAAGCAAA ATTTTTCACA AACTCTGTAA