LOC102298015 cDNA ORF clone, Haplochromis burtoni(Burton's mouthbrooder)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC102298015
Entrez Gene ID	102298015
Full Name	protein phosphatase 1K, mitochondrial-like
Gene Type	protein-coding
Organism	Haplochromis burtoni(Burton's mouthbrooder)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005949688.2	XP_005949750.2	protein phosphatase 1K, mitochondrial-like

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Comparative transcriptomics of Eastern African cichlid fishes shows signs of positive selection and a large contribution of untranslated regions to genetic diversity.
Baldo L, Santos ME, Salzburger W
Genome biology and evolution3443-55(2011)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC102298015 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC102298015 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OHa33824	XM_005949688.2 Latest version!	Haplochromis burtoni protein phosphatase 1K, mitochondrial-like (LOC102298015), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC102298015 ( XM_005949688.2 ) cDNA ORF clone, Haplochromis burtoni(Burton's mouthbrooder) -> XP_005949750.2 Haplochromis burtoni protein phosphatase 1K, mitochondrial-like (LOC102298015), mRNA.

Price & Availability↑

CloneID	OHa33824
Clone ID Related Accession (Same CDS sequence)	XM_005949688.2
Accession Version	XM_005949688.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1140bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-09-28
Organism	Haplochromis burtoni(Burton's mouthbrooder)
Product	protein phosphatase 1K, mitochondrial-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005180130.1) and transcript sequence (JL523726.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 29, 2015 this sequence version replaced XM_005949688.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Haplochromis burtoni Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 145 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGTCATCTG CAGTGCTGTT CAATATGCTG CGTTGTGGTC GCTCCACAAT CTCCAGACAA 
ACCTTCCTCT CCATACGATC TTCACCAGAA ACCTCCACGG CCTCTGGACA GGTGGGCGGG 
GCATTGTTTG GGATGGTGGG CGTGCGGCAG GGAAGTGGAT CAGTCGGATT GGACGGTGAC 
ATCAGCGTCC GTCCAATGAC CTGGGACTCA TTTGGTATTT GGGACAACAG GATAGAAGAA 
CCAATACTAC TACCCTCCAG TATCAGATAT GGAAGACCCA TCCCACAGGT CAGTCTGTCT 
CGGGTCGGCA GTACGTCTGT TCTCGGTCTT AGGAATCAGA ACGAGGACCG TCTCCGCATT 
GGCCATATTC ATGACAACCT ACTGTACTTC GCTGTGTTCG ACGGCCATGG TGGCCCGCAT 
GCTGCAGACT ACTGCTACAC CTTCATGGAG AAATTTATCA GAGATGCTTT GGAACAGGAT 
GATGATCTGG AGAAAGTTTT AAAGAAAGCC TTTTTAGATG CTGACAAGGC TCTACACACA 
CATCTCAGCT ACTTCAACAA TGCCTCTTTC CTGACAGCTG GCACCACTGC AACGGTTGCT 
TTACTACGTG ATGGCGTAGA GCTGGTGGTC GGTAGTGTTG GTGACAGTCG GGCAATGTTG 
TGCAGGAATG GAAAAGCCAA CAAGCTCACC ACAGACCACA CACCTGACTG CGAGGACGAG 
AGACACCGGA TCCAGAGGTT TGGAGGTTAC GTGACATGGA ACAGCGTGGG TCAGGCTAAT 
GTTAACGGGA GGCTGGCCAT GACACGAAGC ATTGGAGACT TCCACCTGAA AGCTAGCGGT 
GTCATCGCAG AGCCAGATAC CCAACGACAC ACCGTCCAAC ATGCCAACGA CTCGTTCCTG 
GCTTTGACCA CAGACGGTAT CAACTTCCTG CTTAGTGATC AGGAGATCTG TGACAGCATC 
AACCAATGCC AAGACCCCAC TGAGGCTGCT GATGTCATCG CTCAGCAGGC GTTGCAGTAC 
GGCTCAGAGG ACAATGCTAC AATCATCATC ATCCCATTCG GAGCCTGGGG GAGACATCAG 
AGCTCCACCA CAGTGTACAG CATGAGCAGG AACTTCATTT CAAGTGGGAG ATGGGCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005949750.2
CDS	160..1299
Translation	MSSAVLFNMLRCGRSTISRQTFLSIRSSPETSTASGQVGGALFGMVGVRQGSGSVGLDGDISVRPMTWDSFGIWDNRIEEPILLPSSIRYGRPIPQVSLSRVGSTSVLGLRNQNEDRLRIGHIHDNLLYFAVFDGHGGPHAADYCYTFMEKFIRDALEQDDDLEKVLKKAFLDADKALHTHLSYFNNASFLTAGTTATVALLRDGVELVVGSVGDSRAMLCRNGKANKLTTDHTPDCEDERHRIQRFGGYVTWNSVGQANVNGRLAMTRSIGDFHLKASGVIAEPDTQRHTVQHANDSFLALTTDGINFLLSDQEICDSINQCQDPTEAADVIAQQALQYGSEDNATIIIIPFGAWGRHQSSTTVYSMSRNFISSGRWA

Target ORF information:

RefSeq Version	XM_005949688.2
Organism	Haplochromis burtoni(Burton's mouthbrooder)
Definition	Haplochromis burtoni protein phosphatase 1K, mitochondrial-like (LOC102298015), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005949688.2

ORF Insert Sequence:

ATGTCATCTG CAGTGCTGTT CAATATGCTG CGTTGTGGTC GCTCCACAAT CTCCAGACAA 
ACCTTCCTCT CCATACGATC TTCACCAGAA ACCTCCACGG CCTCTGGACA GGTGGGCGGG 
GCATTGTTTG GGATGGTGGG CGTGCGGCAG GGAAGTGGAT CAGTCGGATT GGACGGTGAC 
ATCAGCGTCC GTCCAATGAC CTGGGACTCA TTTGGTATTT GGGACAACAG GATAGAAGAA 
CCAATACTAC TACCCTCCAG TATCAGATAT GGAAGACCCA TCCCACAGGT CAGTCTGTCT 
CGGGTCGGCA GTACGTCTGT TCTCGGTCTT AGGAATCAGA ACGAGGACCG TCTCCGCATT 
GGCCATATTC ATGACAACCT ACTGTACTTC GCTGTGTTCG ACGGCCATGG TGGCCCGCAT 
GCTGCAGACT ACTGCTACAC CTTCATGGAG AAATTTATCA GAGATGCTTT GGAACAGGAT 
GATGATCTGG AGAAAGTTTT AAAGAAAGCC TTTTTAGATG CTGACAAGGC TCTACACACA 
CATCTCAGCT ACTTCAACAA TGCCTCTTTC CTGACAGCTG GCACCACTGC AACGGTTGCT 
TTACTACGTG ATGGCGTAGA GCTGGTGGTC GGTAGTGTTG GTGACAGTCG GGCAATGTTG 
TGCAGGAATG GAAAAGCCAA CAAGCTCACC ACAGACCACA CACCTGACTG CGAGGACGAG 
AGACACCGGA TCCAGAGGTT TGGAGGTTAC GTGACATGGA ACAGCGTGGG TCAGGCTAAT 
GTTAACGGGA GGCTGGCCAT GACACGAAGC ATTGGAGACT TCCACCTGAA AGCTAGCGGT 
GTCATCGCAG AGCCAGATAC CCAACGACAC ACCGTCCAAC ATGCCAACGA CTCGTTCCTG 
GCTTTGACCA CAGACGGTAT CAACTTCCTG CTTAGTGATC AGGAGATCTG TGACAGCATC 
AACCAATGCC AAGACCCCAC TGAGGCTGCT GATGTCATCG CTCAGCAGGC GTTGCAGTAC 
GGCTCAGAGG ACAATGCTAC AATCATCATC ATCCCATTCG GAGCCTGGGG GAGACATCAG 
AGCTCCACCA CAGTGTACAG CATGAGCAGG AACTTCATTT CAAGTGGGAG ATGGGCATAG