LOC105920806 cDNA ORF clone, Fundulus heteroclitus(Mummichog)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105920806
Entrez Gene ID	105920806
Full Name	E3 ubiquitin-protein ligase TRIM39-like
Gene Type	protein-coding
Organism	Fundulus heteroclitus(Mummichog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_012856443.2	XP_012711897.1	E3 ubiquitin-protein ligase TRIM39-like
XM_012856443.1	XP_012711897.1	E3 ubiquitin-protein ligase TRIM39-like

Pathways from BioSystems
Gene Ontology

The following LOC105920806 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105920806 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFu105211	XM_012856443.2 Latest version!	Fundulus heteroclitus E3 ubiquitin-protein ligase TRIM39-like (LOC105920806), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
View Old Accession Versions >>
OFu105211	XM_012856443.1	Fundulus heteroclitus E3 ubiquitin-protein ligase TRIM39-like (LOC105920806), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105920806 ( XM_012856443.2 ) cDNA ORF clone, Fundulus heteroclitus(Mummichog) -> XP_012711897.1 Fundulus heteroclitus E3 ubiquitin-protein ligase TRIM39-like (LOC105920806), mRNA.

Price & Availability↑

CloneID	OFu105211
Clone ID Related Accession (Same CDS sequence)	XM_012856443.2 , XM_012856443.1
Accession Version	XM_012856443.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1458bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-05-31
Organism	Fundulus heteroclitus(mummichog)
Product	E3 ubiquitin-protein ligase TRIM39-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012225022.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 1, 2017 this sequence version replaced XM_012856443.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Fundulus heteroclitus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCGAGGA ACATGGCTTT CAGGCCAGAA GCAGATCTGA CCTGCTCCAT CTGTCGAGAC 
GTTTTCAAAG ATCCGGTTGT GCTGACATGC AGCCACAGCT TCTGCAATAA CTGTGTGAAG 
TCCTGGTGGT GGGATAAGCA GGAGTGTGAG TGTCCGGTCT GCAAGAGCGT CTCCCAGACG 
AGACAACCGC CTCGCAACCT GGCACTGAGA AACCTGTGTG AGGCCGCAGT GCAGAGGAAA 
GGCAACGAGG ACGCTGGAGG CGTGTGCGGC GTTCACTCTG AAAGGTTCAA ACTGTTCTGC 
CTGGATCATC AGGAGCCTGT GTGTGTCGTC TGTCGAGATT CCCACGCACA CAGCCAGCAC 
AGTTTCAGGC CAATCGACGA GGTTGCACAA GAAGGCAAAA AGAGGCTCCA GGTGTCGCTG 
CTGCCGCTGA AGAAGAAGCT GAAGCTCTTT GAAGAAGCCA AGGAACAATT TGAAGAAAAA 
GAGAAGTACA TGAAGACCCA GGCTGAGCAC GCAGAGGCCC AGATTAAAGA GCACTTCAAG 
AAACTTTACC GGTTTCTGCA AAAGGAAGAG AAGAAGAGGA TCGCTGCTTT AAGCTATGAA 
GGAAAGAACA ACAGGAAATG GTTCACACTT GACTTTGATG ACCTGAGCAA AAACGTAGCT 
TTGCTTTCAG AAACCATCAG AGTCACGGAA AAGGAGCTGC AAGCTGAAAG TGTCACTTTT 
CTGCAGAACC TAAAGAGTGC AGAGAAAAAC ATCCAGTGGT GCATCCAGCT GAAGGACCCT 
CCAGCATCCT TTGGATCTCT GATAAATGTT GCTGAACATC TGGGCAACCT GACCAGGTTG 
ATCTGGACCA AGATGGAGGA CACCATCTCC TGCACCCCTG TGTTCCTGGA CCCCAGCACG 
GCTCATCCTC ACCTCGCCGT CTCAGAAGAC CTGACCAGTT TGAGGTATAG AAGGAGAAAA 
AAAGTTCTTA AAATACAAGA GACGATCGAC TACTACCGCT GCGTCCTGGG ATCTGAGAGC 
TTTAACTCGG GATCTCACAC CTGGGACGTA GAAGTCGGAG ACAGCGGTCA CTGGGGACTG 
GGTGTGGCGG CCTTGTTCGC CTACAGGAAG AAAGACTTAA AGTCTGGATT GTGGATCATC 
AAGTTTCAGC GTAACGAATA CTCGGCCATG TCTCCGCAGA ATGAGGTGAG GCTCCACCAC 
GTAAAGACAT TTAAGAAGAT CAGAGTCCGT CTGCGGTGCG ACAGAAGAAA ACTGTCGTTT 
TATGACCTTG AAACTGGAGC TCACATTCAC TCCTTCACAC AGATTACCGA CACAAGTCTT 
TATCCGTATT TCAGCAACGG AAAGAGGTCC CCCATGAGGA TTTTACCAGC AAATAGCTCG 
ACTAAGATAC CACCGCTAAT AATTATCGGT TTTATAATGA TGATGATGAC GTTGGTTTCA 
ATTCTGACGC TAATTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012711897.1
CDS	11..1468
Translation	MPRNMAFRPEADLTCSICRDVFKDPVVLTCSHSFCNNCVKSWWWDKQECECPVCKSVSQTRQPPRNLALRNLCEAAVQRKGNEDAGGVCGVHSERFKLFCLDHQEPVCVVCRDSHAHSQHSFRPIDEVAQEGKKRLQVSLLPLKKKLKLFEEAKEQFEEKEKYMKTQAEHAEAQIKEHFKKLYRFLQKEEKKRIAALSYEGKNNRKWFTLDFDDLSKNVALLSETIRVTEKELQAESVTFLQNLKSAEKNIQWCIQLKDPPASFGSLINVAEHLGNLTRLIWTKMEDTISCTPVFLDPSTAHPHLAVSEDLTSLRYRRRKKVLKIQETIDYYRCVLGSESFNSGSHTWDVEVGDSGHWGLGVAALFAYRKKDLKSGLWIIKFQRNEYSAMSPQNEVRLHHVKTFKKIRVRLRCDRRKLSFYDLETGAHIHSFTQITDTSLYPYFSNGKRSPMRILPANSSTKIPPLIIIGFIMMMMTLVSILTLI

Target ORF information:

RefSeq Version	XM_012856443.2
Organism	Fundulus heteroclitus(mummichog)
Definition	Fundulus heteroclitus E3 ubiquitin-protein ligase TRIM39-like (LOC105920806), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012856443.2

ORF Insert Sequence:

ATGCCGAGGA ACATGGCTTT CAGGCCAGAA GCAGATCTGA CCTGCTCCAT CTGTCGAGAC 
GTTTTCAAAG ATCCGGTTGT GCTGACATGC AGCCACAGCT TCTGCAATAA CTGTGTGAAG 
TCCTGGTGGT GGGATAAGCA GGAGTGTGAG TGTCCGGTCT GCAAGAGCGT CTCCCAGACG 
AGACAACCGC CTCGCAACCT GGCACTGAGA AACCTGTGTG AGGCCGCAGT GCAGAGGAAA 
GGCAACGAGG ACGCTGGAGG CGTGTGCGGC GTTCACTCTG AAAGGTTCAA ACTGTTCTGC 
CTGGATCATC AGGAGCCTGT GTGTGTCGTC TGTCGAGATT CCCACGCACA CAGCCAGCAC 
AGTTTCAGGC CAATCGACGA GGTTGCACAA GAAGGCAAAA AGAGGCTCCA GGTGTCGCTG 
CTGCCGCTGA AGAAGAAGCT GAAGCTCTTT GAAGAAGCCA AGGAACAATT TGAAGAAAAA 
GAGAAGTACA TGAAGACCCA GGCTGAGCAC GCAGAGGCCC AGATTAAAGA GCACTTCAAG 
AAACTTTACC GGTTTCTGCA AAAGGAAGAG AAGAAGAGGA TCGCTGCTTT AAGCTATGAA 
GGAAAGAACA ACAGGAAATG GTTCACACTT GACTTTGATG ACCTGAGCAA AAACGTAGCT 
TTGCTTTCAG AAACCATCAG AGTCACGGAA AAGGAGCTGC AAGCTGAAAG TGTCACTTTT 
CTGCAGAACC TAAAGAGTGC AGAGAAAAAC ATCCAGTGGT GCATCCAGCT GAAGGACCCT 
CCAGCATCCT TTGGATCTCT GATAAATGTT GCTGAACATC TGGGCAACCT GACCAGGTTG 
ATCTGGACCA AGATGGAGGA CACCATCTCC TGCACCCCTG TGTTCCTGGA CCCCAGCACG 
GCTCATCCTC ACCTCGCCGT CTCAGAAGAC CTGACCAGTT TGAGGTATAG AAGGAGAAAA 
AAAGTTCTTA AAATACAAGA GACGATCGAC TACTACCGCT GCGTCCTGGG ATCTGAGAGC 
TTTAACTCGG GATCTCACAC CTGGGACGTA GAAGTCGGAG ACAGCGGTCA CTGGGGACTG 
GGTGTGGCGG CCTTGTTCGC CTACAGGAAG AAAGACTTAA AGTCTGGATT GTGGATCATC 
AAGTTTCAGC GTAACGAATA CTCGGCCATG TCTCCGCAGA ATGAGGTGAG GCTCCACCAC 
GTAAAGACAT TTAAGAAGAT CAGAGTCCGT CTGCGGTGCG ACAGAAGAAA ACTGTCGTTT 
TATGACCTTG AAACTGGAGC TCACATTCAC TCCTTCACAC AGATTACCGA CACAAGTCTT 
TATCCGTATT TCAGCAACGG AAAGAGGTCC CCCATGAGGA TTTTACCAGC AAATAGCTCG 
ACTAAGATAC CACCGCTAAT AATTATCGGT TTTATAATGA TGATGATGAC GTTGGTTTCA 
ATTCTGACGC TAATTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC105920806 ( XM_012856443.1 ) cDNA ORF clone, Fundulus heteroclitus(Mummichog) -> XP_012711897.1 Fundulus heteroclitus E3 ubiquitin-protein ligase TRIM39-like (LOC105920806), mRNA.

Price & Availability↑

CloneID	OFu105211
Clone ID Related Accession (Same CDS sequence)	XM_012856443.2 , XM_012856443.1
Accession Version	XM_012856443.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1458bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-06-14
Organism	Fundulus heteroclitus(Mummichog)
Product	E3 ubiquitin-protein ligase TRIM39-like
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012225022.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Fundulus heteroclitus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 2% of CDS bases ##RefSeq-Attributes-END##

ATGCCGAGGA ACATGGCTTT CAGGCCAGAA GCAGATCTGA CCTGCTCCAT CTGTCGAGAC 
GTTTTCAAAG ATCCGGTTGT GCTGACATGC AGCCACAGCT TCTGCAATAA CTGTGTGAAG 
TCCTGGTGGT GGGATAAGCA GGAGTGTGAG TGTCCGGTCT GCAAGAGCGT CTCCCAGACG 
AGACAACCGC CTCGCAACCT GGCACTGAGA AACCTGTGTG AGGCCGCAGT GCAGAGGAAA 
GGCAACGAGG ACGCTGGAGG CGTGTGCGGC GTTCACTCTG AAAGGTTCAA ACTGTTCTGC 
CTGGATCATC AGGAGCCTGT GTGTGTCGTC TGTCGAGATT CCCACGCACA CAGCCAGCAC 
AGTTTCAGGC CAATCGACGA GGTTGCACAA GAAGGCAAAA AGAGGCTCCA GGTGTCGCTG 
CTGCCGCTGA AGAAGAAGCT GAAGCTCTTT GAAGAAGCCA AGGAACAATT TGAAGAAAAA 
GAGAAGTACA TGAAGACCCA GGCTGAGCAC GCAGAGGCCC AGATTAAAGA GCACTTCAAG 
AAACTTTACC GGTTTCTGCA AAAGGAAGAG AAGAAGAGGA TCGCTGCTTT AAGCTATGAA 
GGAAAGAACA ACAGGAAATG GTTCACACTT GACTTTGATG ACCTGAGCAA AAACGTAGCT 
TTGCTTTCAG AAACCATCAG AGTCACGGAA AAGGAGCTGC AAGCTGAAAG TGTCACTTTT 
CTGCAGAACC TAAAGAGTGC AGAGAAAAAC ATCCAGTGGT GCATCCAGCT GAAGGACCCT 
CCAGCATCCT TTGGATCTCT GATAAATGTT GCTGAACATC TGGGCAACCT GACCAGGTTG 
ATCTGGACCA AGATGGAGGA CACCATCTCC TGCACCCCTG TGTTCCTGGA CCCCAGCACG 
GCTCATCCTC ACCTCGCCGT CTCAGAAGAC CTGACCAGTT TGAGGTATAG AAGGAGAAAA 
AAAGTTCTTA AAATACAAGA GACGATCGAC TACTACCGCT GCGTCCTGGG ATCTGAGAGC 
TTTAACTCGG GATCTCACAC CTGGGACGTA GAAGTCGGAG ACAGCGGTCA CTGGGGACTG 
GGTGTGGCGG CCTTGTTCGC CTACAGGAAG AAAGACTTAA AGTCTGGATT GTGGATCATC 
AAGTTTCAGC GTAACGAATA CTCGGCCATG TCTCCGCAGA ATGAGGTGAG GCTCCACCAC 
GTAAAGACAT TTAAGAAGAT CAGAGTCCGT CTGCGGTGCG ACAGAAGAAA ACTGTCGTTT 
TATGACCTTG AAACTGGAGC TCACATTCAC TCCTTCACAC AGATTACCGA CACAAGTCTT 
TATCCGTATT TCAGCAACGG AAAGAGGTCC CCCATGAGGA TTTTACCAGC AAATAGCTCG 
ACTAAGATAC CACCGCTAAT AATTATCGGT TTTATAATGA TGATGATGAC GTTGGTTTCA 
ATTCTGACGC TAATTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012711897.1
CDS	1..1458
Translation	MPRNMAFRPEADLTCSICRDVFKDPVVLTCSHSFCNNCVKSWWWDKQECECPVCKSVSQTRQPPRNLALRNLCEAAVQRKGNEDAGGVCGVHSERFKLFCLDHQEPVCVVCRDSHAHSQHSFRPIDEVAQEGKKRLQVSLLPLKKKLKLFEEAKEQFEEKEKYMKTQAEHAEAQIKEHFKKLYRFLQKEEKKRIAALSYEGKNNRKWFTLDFDDLSKNVALLSETIRVTEKELQAESVTFLQNLKSAEKNIQWCIQLKDPPASFGSLINVAEHLGNLTRLIWTKMEDTISCTPVFLDPSTAHPHLAVSEDLTSLRYRRRKKVLKIQETIDYYRCVLGSESFNSGSHTWDVEVGDSGHWGLGVAALFAYRKKDLKSGLWIIKFQRNEYSAMSPQNEVRLHHVKTFKKIRVRLRCDRRKLSFYDLETGAHIHSFTQITDTSLYPYFSNGKRSPMRILPANSSTKIPPLIIIGFIMMMMTLVSILTLI

Target ORF information:

RefSeq Version	XM_012856443.1
Organism	Fundulus heteroclitus(Mummichog)
Definition	Fundulus heteroclitus E3 ubiquitin-protein ligase TRIM39-like (LOC105920806), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012856443.1

ORF Insert Sequence:

ATGCCGAGGA ACATGGCTTT CAGGCCAGAA GCAGATCTGA CCTGCTCCAT CTGTCGAGAC 
GTTTTCAAAG ATCCGGTTGT GCTGACATGC AGCCACAGCT TCTGCAATAA CTGTGTGAAG 
TCCTGGTGGT GGGATAAGCA GGAGTGTGAG TGTCCGGTCT GCAAGAGCGT CTCCCAGACG 
AGACAACCGC CTCGCAACCT GGCACTGAGA AACCTGTGTG AGGCCGCAGT GCAGAGGAAA 
GGCAACGAGG ACGCTGGAGG CGTGTGCGGC GTTCACTCTG AAAGGTTCAA ACTGTTCTGC 
CTGGATCATC AGGAGCCTGT GTGTGTCGTC TGTCGAGATT CCCACGCACA CAGCCAGCAC 
AGTTTCAGGC CAATCGACGA GGTTGCACAA GAAGGCAAAA AGAGGCTCCA GGTGTCGCTG 
CTGCCGCTGA AGAAGAAGCT GAAGCTCTTT GAAGAAGCCA AGGAACAATT TGAAGAAAAA 
GAGAAGTACA TGAAGACCCA GGCTGAGCAC GCAGAGGCCC AGATTAAAGA GCACTTCAAG 
AAACTTTACC GGTTTCTGCA AAAGGAAGAG AAGAAGAGGA TCGCTGCTTT AAGCTATGAA 
GGAAAGAACA ACAGGAAATG GTTCACACTT GACTTTGATG ACCTGAGCAA AAACGTAGCT 
TTGCTTTCAG AAACCATCAG AGTCACGGAA AAGGAGCTGC AAGCTGAAAG TGTCACTTTT 
CTGCAGAACC TAAAGAGTGC AGAGAAAAAC ATCCAGTGGT GCATCCAGCT GAAGGACCCT 
CCAGCATCCT TTGGATCTCT GATAAATGTT GCTGAACATC TGGGCAACCT GACCAGGTTG 
ATCTGGACCA AGATGGAGGA CACCATCTCC TGCACCCCTG TGTTCCTGGA CCCCAGCACG 
GCTCATCCTC ACCTCGCCGT CTCAGAAGAC CTGACCAGTT TGAGGTATAG AAGGAGAAAA 
AAAGTTCTTA AAATACAAGA GACGATCGAC TACTACCGCT GCGTCCTGGG ATCTGAGAGC 
TTTAACTCGG GATCTCACAC CTGGGACGTA GAAGTCGGAG ACAGCGGTCA CTGGGGACTG 
GGTGTGGCGG CCTTGTTCGC CTACAGGAAG AAAGACTTAA AGTCTGGATT GTGGATCATC 
AAGTTTCAGC GTAACGAATA CTCGGCCATG TCTCCGCAGA ATGAGGTGAG GCTCCACCAC 
GTAAAGACAT TTAAGAAGAT CAGAGTCCGT CTGCGGTGCG ACAGAAGAAA ACTGTCGTTT 
TATGACCTTG AAACTGGAGC TCACATTCAC TCCTTCACAC AGATTACCGA CACAAGTCTT 
TATCCGTATT TCAGCAACGG AAAGAGGTCC CCCATGAGGA TTTTACCAGC AAATAGCTCG 
ACTAAGATAC CACCGCTAAT AATTATCGGT TTTATAATGA TGATGATGAC GTTGGTTTCA 
ATTCTGACGC TAATTTAG