ccl38.1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	ccl38.1
Entrez Gene ID	794050
Full Name	chemokine (C-C motif) ligand 38, duplicate 1
Synonyms	si:dkey-217m5.3
General protein information	Preferred Names chemokine (C-C motif) ligand 38, duplicate 1 Names uncharacterized protein LOC794050 CCL-chr20g CCL38aa Dr20_WGA1544_1_1446828 chemokine CCL-C20g dr-chr20-CCL7-40.0%-DN
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001082896.2	NP_001076365.2	uncharacterized protein LOC794050 precursor

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	si:dkeyp-59a8.2	NP_001025344.1
Danio rerio (zebrafish)	si:dkeyp-59a8.3	NP_001076357.2
Danio rerio (zebrafish)	si:dkeyp-59a8.1	XP_005160896.1
Danio rerio (zebrafish)	si:dkey-217m5.3	NP_001076365.2
Danio rerio (zebrafish)	si:dkeyp-59a8.5	XP_005160897.1

Gene Ontology
Bibliography

Related articles in PubMed

CXCR1 remodels the vascular niche to promote hematopoietic stem and progenitor cell engraftment.
Blaser BW, Moore JL, Hagedorn EJ, Li B, Riquelme R, Lichtig A, Yang S, Zhou Y, Tamplin OJ, Binder V, Zon LI
The Journal of experimental medicine214(4)1011-1027(2017 Apr)

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Briolat V, Jouneau L, Carvalho R, Palha N, Langevin C, Herbomel P, Schwartz O, Spaink HP, Levraud JP, Boudinot P
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)

On the crucial cerebellar wound healing-related pathways and their cross-talks after traumatic brain injury in Danio rerio.
Wu CC, Tsai TH, Chang C, Lee TT, Lin C, Cheng IH, Sun MC, Chuang YJ, Chen BS
PloS one9(6)e97902(2014)

Systematic classification of vertebrate chemokines based on conserved synteny and evolutionary history.
Nomiyama H, Osada N, Yoshie O
Genes to cells : devoted to molecular & cellular mechanisms18(1)1-16(2013 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ccl38.1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ccl38.1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa34410	NM_001082896.2 Latest version!	Danio rerio chemokine (C-C motif) ligand 38, duplicate 1 (ccl38.1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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5 or more Clone	50% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ccl38.1 ( NM_001082896.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001076365.2 Danio rerio chemokine (C-C motif) ligand 38, duplicate 1 (ccl38.1), mRNA.

Price & Availability↑

CloneID	ODa34410
Clone ID Related Accession (Same CDS sequence)	NM_001082896.2
Accession Version	NM_001082896.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 321bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-09-22
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC794050 precursor
Comment	Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AB331763.1. On Mar 2, 2008 this sequence version replaced NM_001082896.1. ##Evidence-Data-START## Transcript exon combination :: AB331763.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END##

ATGAGGAGGT CATGCATCTT CATCGCCTCT CTGGTGCTTG TCGCTTTCTG CTCAGTTGTT 
GGAAGTGATT GGTCCCAATG GTCACAGGGT CCTGAAAAGT GCTGCTTTTC TTTTACCAAT 
GCAAGAATTC CATTAAAGCA GATTGAGAGT TATTATACTA CGCATCTTCA GTGCAGCATG 
AATGCTGTTA TTTTCATCAT AAGGGCTCAA AGGGAGGTCT GCACTAATCC AACTGAGAAA 
TGGGTTCGGA GACTGATGAA GATGGTGGAC AATCAGAACA TGAAGCAGAT GACAGAGGCT 
GGCTCTGTGG ACAGCGCCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001076365.2
CDS	20..340
Translation	MRRSCIFIASLVLVAFCSVVGSDWSQWSQGPEKCCFSFTNARIPLKQIESYYTTHLQCSMNAVIFIIRAQREVCTNPTEKWVRRLMKMVDNQNMKQMTEAGSVDSA

Target ORF information:

RefSeq Version	NM_001082896.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio chemokine (C-C motif) ligand 38, duplicate 1 (ccl38.1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001082896.2

ORF Insert Sequence:

ATGAGGAGGT CATGCATCTT CATCGCCTCT CTGGTGCTTG TCGCTTTCTG CTCAGTTGTT 
GGAAGTGATT GGTCCCAATG GTCACAGGGT CCTGAAAAGT GCTGCTTTTC TTTTACCAAT 
GCAAGAATTC CATTAAAGCA GATTGAGAGT TATTATACTA CGCATCTTCA GTGCAGCATG 
AATGCTGTTA TTTTCATCAT AAGGGCTCAA AGGGAGGTCT GCACTAATCC AACTGAGAAA 
TGGGTTCGGA GACTGATGAA GATGGTGGAC AATCAGAACA TGAAGCAGAT GACAGAGGCT 
GGCTCTGTGG ACAGCGCCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

CXCR1 remodels the vascular niche to promote hematopoietic stem and progenitor cell engraftment.
The Journal of experimental medicine214(4)1011-1027(2017 Apr)
Blaser BW,Moore JL,Hagedorn EJ,Li B,Riquelme R,Lichtig A,Yang S,Zhou Y,Tamplin OJ,Binder V,Zon LI

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)
Briolat V,Jouneau L,Carvalho R,Palha N,Langevin C,Herbomel P,Schwartz O,Spaink HP,Levraud JP,Boudinot P

On the crucial cerebellar wound healing-related pathways and their cross-talks after traumatic brain injury in Danio rerio.
PloS one9(6)e97902(2014)
Wu CC,Tsai TH,Chang C,Lee TT,Lin C,Cheng IH,Sun MC,Chuang YJ,Chen BS

Systematic classification of vertebrate chemokines based on conserved synteny and evolutionary history.
Genes to cells : devoted to molecular & cellular mechanisms18(1)1-16(2013 Jan)
Nomiyama H,Osada N,Yoshie O