bnc1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	bnc1
Entrez Gene ID	568786
Full Name	basonuclin 1
Synonyms	fc51b07,wu:fc51b07
General protein information	Preferred Names basonuclin 1 Names zinc finger protein basonuclin-1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009300994.2	XP_009299269.1	zinc finger protein basonuclin-1

Pathways from BioSystems

Homologies

Homo sapiens (human)	BNC1	NP_001708.3
Pan troglodytes (chimpanzee)	BNC1	XP_523140.4
	BNC1	XP_001111612.2
Mus musculus (house mouse)	Bnc1	NP_031588.2
Danio rerio (zebrafish)	LOC568786	XP_697231.3
Gallus gallus (chicken)	BNC1	XP_004943880.1
Rattus norvegicus (Norway rat)	Bnc1	NP_001102386.1
Canis lupus familiaris (dog)	BNC1	XP_005618455.1
Bos taurus (cattle)	BNC1	XP_002696643.1
Xenopus tropicalis (tropical clawed frog)	bnc1	XP_004912674.1

Gene Ontology

The following bnc1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the bnc1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa45552	XM_009300994.2 Latest version!	Danio rerio basonuclin 1 (bnc1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

bnc1 ( XM_009300994.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009299269.1 Danio rerio basonuclin 1 (bnc1), mRNA.

Price & Availability↑

CloneID	ODa45552
Clone ID Related Accession (Same CDS sequence)	XM_009300994.2
Accession Version	XM_009300994.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2613bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	zinc finger protein basonuclin-1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003335650.1) and transcript sequence (GDQH01022451.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009300994.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 1216 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGTCTGAGG CTATTTGCTG CACGGTGGTG AACTGCAACT GTGACAGTTT TAAACCAGGT 
AAACTGAGGC GGCGACTCTG TGAACACTGT AGGCACGGCT GGGTCGCCCA TGCTCTGAGC 
AAGCTGAAGG TTCATCACAT GTACCAGGGC AGCCAGGTGG AGATCGTTCA CTCCAATGTG 
GTATTTGATA TCTGTAGTCT GATGCTTTAT GGGACGCAGG CGATCCCAGT GCGTCTGAAG 
ATCCTGCTGG ACCGACTCTT CAGCGTCCTC AAGCAGGAGG AGGTTATTCA GATCCTCAAT 
GCGCTGGACT GGACTCTACA GGACTACATC CGCGGATACG TCCTGCAGGA CGTGGCTGGT 
AAGGTGTTGG ACCGCTGGGC GATAATGACC TTTGAAGAGG AGATCGTCAC GCTGCAGCAG 
TTCCTCCGAT TTGGGGAGAC CAAATCCATC GTGGAGCTCA TGGCCCTGCA GGATAAGGAG 
GGACAGGCTG TTGTTGTCTC CACCACCAAG ACCAATTCTG ACATCCGCAG CTTCATCGAG 
AGCAGCACGC AGCGCTCGGT ACGCCTGCCT GCTAAAGCGG ATGCCCCTGG CTGCAGTAAT 
GGGCACCACT TCGAGACGCT GGTCAACAGT ATGGCGCTCA TGTTGCCGCT GCAGCTTATG 
AACTCGGTGC CCGCGCCGCT GCTGAGTTGC AATACAGACT CCGACCACCA GGAGGTGCAA 
AACAGGCACG ACGCTTCAGA AATAAGCCTG GACAGTGTTT CACCGTTCGA GTCTGGCCCC 
GTGAGAACAG ACGTGTTGCT GAACAGCGAA TCTCCAAAGA TGGAATCGGA AGAGTTTAAC 
GTGAGCGGAA ACTCCTCTCC GTCCACGAAC TGCACACCCT CCGTCCACTC CGAAATCACA 
CACCTGTCTC CGGAGAGCAA GATCCGGTGT GCAGAGAAGA GCGGATCGCT GAAGAAGGGC 
CGCGTGTTCT GCAGCGCCTG CGAGAAAACC TTCTACGATA AAGGCACGCT GAAGATCCAC 
TATAATGCAG TTCACCTGAA GATCAAGCAC AAGTGCACCA TCGAGGGCTG CAACATGGTG 
TTCAGCTCCT TACGCAGCCG GAACCGACAC AGCGCCAACC CCAACCCACG GCTGCACATG 
CCAATGAACC GCAATAATCG TGACAAAGAC CTGCGGGGTG GCCTGAGCCC GGGCCTAGAG 
GATGGGCAGG AGGACGAGAA GAGAGAGTTC ATTCCCATCC CGGAGAGCCG CAACGTCTCC 
AGTTTTATAA TTCGCAATTC CGAGCCCAAA CTGCACGGCT CACTGTCGGG CCTAAGCCAG 
AGCGGCATCC TCTTTCCCAA CCTGAAGACA GTACAGCCAG TGCTGCCCTT TTACCGCAGC 
CTGGTGACCC CGGCTGAGCT GGCACACACG CCGGGCAGCC TGCCCTCCCT GCCACTGTTG 
TCCTCCTCTG TGCCCGCCGG CTCCAGACAC ATGCTGATGG ACACGGTGCC CAAGAAGAAA 
TCTCGCAAGT CCAGCATGCC AATCAAAATC GAGAAAGATG AGCTGGCGGA GGAGGGTGTG 
TCTGAAGAAG AGACTCCGCC CCTCAGCCCC TGCACAGAAA ACTGTGGTGT CAGCAACTCG 
GGCCGTGAGG ATGGCGAGGA TCTTCTGTTG ACCACCGTGG ACACCCAAGA CACTCAGTGG 
CACAAACTGA CCCATGAGGA CAGTTGCATC ATCTCACCAT CCTCTCCTTC CATCTTTCAC 
ATTAAACAGA ACAGCGAGAA AGAGGAGTCC TTAAAATGTG AAGAGCCAGC ATGCAGTTCC 
CGCCCGGAGC CCTGCAGCCA CTGGCCAGCC CGTTTCACAC AACACAGCGA AAACTGTGCA 
GACGGCGGCA GTGACCCTGA GAGCGTGGGT CTGGATGATA AAGAAGAGCT GTCGCACCCG 
TGTGAGATCT GCAGCAAGAC ATTTAAAAAC CCTTACAGTG TGAAAATGCA TTATCGAAAT 
GTGCACTTAA AGGAGATGCA CATGTGCACT GTGGACGGCT GCAATGCTGC GTTTCCGTCC 
CGCCGCAGCA GAGACCGACA CGGTGCAAAC CTGAATCTGC ACCACAGGCT GTTGACCAAA 
GATCATTCAG GAACATCTTC TCTCCGCAGA GAGCCTCCAG ACCTGCTTCA CCAACAGCCT 
CTGGGTCAGA TGTCCGGCGT CCTGAAGGGC AGCCAGCGCA CGGGTCTGGT GTTCCCCATG 
AGTAAATCCC TAGAGCCAGA AGAGGGCGCT GTGGAAAACG AGGCAGTGTT GGACCTGAGC 
ACCCGAGGGA GCAGCCAGTC GTCCTGGGAC TCAGGCAGCG ATGAAGGACT CCCTCTGGAG 
GACAGCGAGG AAAGCTGTGA CGGGCCGGCT GCGTCTCCCA GCCTCCAGCA GTCCCACAGC 
TCCTCCATCA CCTGCCACAT CTGTCAGAAA GTTTACAGCA ACAAAGGCAC GTTCAGGGCT 
CACTACAAAA CGGTGCACCT CCGGCTGCTC CACAAGTGCA AAATACCAGG CTGTGACACC 
ACATTCTCTT CTGTTCGCAG CCGCAACCGC CACAGTCAGA ACCCAAATCT TCACCGTAAC 
CTTGCAGGGA ATATTTCCCT CAAGCAGGAG TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009299269.1
CDS	1523..4135
Translation	MSEAICCTVVNCNCDSFKPGKLRRRLCEHCRHGWVAHALSKLKVHHMYQGSQVEIVHSNVVFDICSLMLYGTQAIPVRLKILLDRLFSVLKQEEVIQILNALDWTLQDYIRGYVLQDVAGKVLDRWAIMTFEEEIVTLQQFLRFGETKSIVELMALQDKEGQAVVVSTTKTNSDIRSFIESSTQRSVRLPAKADAPGCSNGHHFETLVNSMALMLPLQLMNSVPAPLLSCNTDSDHQEVQNRHDASEISLDSVSPFESGPVRTDVLLNSESPKMESEEFNVSGNSSPSTNCTPSVHSEITHLSPESKIRCAEKSGSLKKGRVFCSACEKTFYDKGTLKIHYNAVHLKIKHKCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMNRNNRDKDLRGGLSPGLEDGQEDEKREFIPIPESRNVSSFIIRNSEPKLHGSLSGLSQSGILFPNLKTVQPVLPFYRSLVTPAELAHTPGSLPSLPLLSSSVPAGSRHMLMDTVPKKKSRKSSMPIKIEKDELAEEGVSEEETPPLSPCTENCGVSNSGREDGEDLLLTTVDTQDTQWHKLTHEDSCIISPSSPSIFHIKQNSEKEESLKCEEPACSSRPEPCSHWPARFTQHSENCADGGSDPESVGLDDKEELSHPCEICSKTFKNPYSVKMHYRNVHLKEMHMCTVDGCNAAFPSRRSRDRHGANLNLHHRLLTKDHSGTSSLRREPPDLLHQQPLGQMSGVLKGSQRTGLVFPMSKSLEPEEGAVENEAVLDLSTRGSSQSSWDSGSDEGLPLEDSEESCDGPAASPSLQQSHSSSITCHICQKVYSNKGTFRAHYKTVHLRLLHKCKIPGCDTTFSSVRSRNRHSQNPNLHRNLAGNISLKQE

Target ORF information:

RefSeq Version	XM_009300994.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio basonuclin 1 (bnc1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009300994.2

ORF Insert Sequence:

ATGTCTGAGG CTATTTGCTG CACGGTGGTG AACTGCAACT GTGACAGTTT TAAACCAGGT 
AAACTGAGGC GGCGACTCTG TGAACACTGT AGGCACGGCT GGGTCGCCCA TGCTCTGAGC 
AAGCTGAAGG TTCATCACAT GTACCAGGGC AGCCAGGTGG AGATCGTTCA CTCCAATGTG 
GTATTTGATA TCTGTAGTCT GATGCTTTAT GGGACGCAGG CGATCCCAGT GCGTCTGAAG 
ATCCTGCTGG ACCGACTCTT CAGCGTCCTC AAGCAGGAGG AGGTTATTCA GATCCTCAAT 
GCGCTGGACT GGACTCTACA GGACTACATC CGCGGATACG TCCTGCAGGA CGTGGCTGGT 
AAGGTGTTGG ACCGCTGGGC GATAATGACC TTTGAAGAGG AGATCGTCAC GCTGCAGCAG 
TTCCTCCGAT TTGGGGAGAC CAAATCCATC GTGGAGCTCA TGGCCCTGCA GGATAAGGAG 
GGACAGGCTG TTGTTGTCTC CACCACCAAG ACCAATTCTG ACATCCGCAG CTTCATCGAG 
AGCAGCACGC AGCGCTCGGT ACGCCTGCCT GCTAAAGCGG ATGCCCCTGG CTGCAGTAAT 
GGGCACCACT TCGAGACGCT GGTCAACAGT ATGGCGCTCA TGTTGCCGCT GCAGCTTATG 
AACTCGGTGC CCGCGCCGCT GCTGAGTTGC AATACAGACT CCGACCACCA GGAGGTGCAA 
AACAGGCACG ACGCTTCAGA AATAAGCCTG GACAGTGTTT CACCGTTCGA GTCTGGCCCC 
GTGAGAACAG ACGTGTTGCT GAACAGCGAA TCTCCAAAGA TGGAATCGGA AGAGTTTAAC 
GTGAGCGGAA ACTCCTCTCC GTCCACGAAC TGCACACCCT CCGTCCACTC CGAAATCACA 
CACCTGTCTC CGGAGAGCAA GATCCGGTGT GCAGAGAAGA GCGGATCGCT GAAGAAGGGC 
CGCGTGTTCT GCAGCGCCTG CGAGAAAACC TTCTACGATA AAGGCACGCT GAAGATCCAC 
TATAATGCAG TTCACCTGAA GATCAAGCAC AAGTGCACCA TCGAGGGCTG CAACATGGTG 
TTCAGCTCCT TACGCAGCCG GAACCGACAC AGCGCCAACC CCAACCCACG GCTGCACATG 
CCAATGAACC GCAATAATCG TGACAAAGAC CTGCGGGGTG GCCTGAGCCC GGGCCTAGAG 
GATGGGCAGG AGGACGAGAA GAGAGAGTTC ATTCCCATCC CGGAGAGCCG CAACGTCTCC 
AGTTTTATAA TTCGCAATTC CGAGCCCAAA CTGCACGGCT CACTGTCGGG CCTAAGCCAG 
AGCGGCATCC TCTTTCCCAA CCTGAAGACA GTACAGCCAG TGCTGCCCTT TTACCGCAGC 
CTGGTGACCC CGGCTGAGCT GGCACACACG CCGGGCAGCC TGCCCTCCCT GCCACTGTTG 
TCCTCCTCTG TGCCCGCCGG CTCCAGACAC ATGCTGATGG ACACGGTGCC CAAGAAGAAA 
TCTCGCAAGT CCAGCATGCC AATCAAAATC GAGAAAGATG AGCTGGCGGA GGAGGGTGTG 
TCTGAAGAAG AGACTCCGCC CCTCAGCCCC TGCACAGAAA ACTGTGGTGT CAGCAACTCG 
GGCCGTGAGG ATGGCGAGGA TCTTCTGTTG ACCACCGTGG ACACCCAAGA CACTCAGTGG 
CACAAACTGA CCCATGAGGA CAGTTGCATC ATCTCACCAT CCTCTCCTTC CATCTTTCAC 
ATTAAACAGA ACAGCGAGAA AGAGGAGTCC TTAAAATGTG AAGAGCCAGC ATGCAGTTCC 
CGCCCGGAGC CCTGCAGCCA CTGGCCAGCC CGTTTCACAC AACACAGCGA AAACTGTGCA 
GACGGCGGCA GTGACCCTGA GAGCGTGGGT CTGGATGATA AAGAAGAGCT GTCGCACCCG 
TGTGAGATCT GCAGCAAGAC ATTTAAAAAC CCTTACAGTG TGAAAATGCA TTATCGAAAT 
GTGCACTTAA AGGAGATGCA CATGTGCACT GTGGACGGCT GCAATGCTGC GTTTCCGTCC 
CGCCGCAGCA GAGACCGACA CGGTGCAAAC CTGAATCTGC ACCACAGGCT GTTGACCAAA 
GATCATTCAG GAACATCTTC TCTCCGCAGA GAGCCTCCAG ACCTGCTTCA CCAACAGCCT 
CTGGGTCAGA TGTCCGGCGT CCTGAAGGGC AGCCAGCGCA CGGGTCTGGT GTTCCCCATG 
AGTAAATCCC TAGAGCCAGA AGAGGGCGCT GTGGAAAACG AGGCAGTGTT GGACCTGAGC 
ACCCGAGGGA GCAGCCAGTC GTCCTGGGAC TCAGGCAGCG ATGAAGGACT CCCTCTGGAG 
GACAGCGAGG AAAGCTGTGA CGGGCCGGCT GCGTCTCCCA GCCTCCAGCA GTCCCACAGC 
TCCTCCATCA CCTGCCACAT CTGTCAGAAA GTTTACAGCA ACAAAGGCAC GTTCAGGGCT 
CACTACAAAA CGGTGCACCT CCGGCTGCTC CACAAGTGCA AAATACCAGG CTGTGACACC 
ACATTCTCTT CTGTTCGCAG CCGCAACCGC CACAGTCAGA ACCCAAATCT TCACCGTAAC 
CTTGCAGGGA ATATTTCCCT CAAGCAGGAG TAG