yme1l1b cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	yme1l1b
Entrez Gene ID	557907
Full Name	YME1-like 1b
Synonyms	ftsh1,yme1l1,zgc:162158
General protein information	Preferred Names YME1-like 1b Names ATP-dependent zinc metalloprotease YME1L1 ATP-dependent metalloprotease FtsH1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001331068.1	NP_001317997.1	ATP-dependent zinc metalloprotease YME1L1

Pathways from BioSystems

Homologies

	LOC714687	XP_002805640.1
Canis lupus familiaris (dog)	YME1L1	XP_535172.3
Rattus norvegicus (Norway rat)	Yme1l1	NP_446134.2
Homo sapiens (human)	YME1L1	NP_647473.1
Danio rerio (zebrafish)	yme1l1b	NP_001082983.1
Caenorhabditis elegans (roundworm)	ymel-1	NP_499298.2
Bos taurus (cattle)	YME1L1	NP_001095320.1
Rattus norvegicus (Norway rat)	LOC100910779	XP_003751780.1
Drosophila melanogaster (fruit fly)	CG3499	NP_001261142.1
Xenopus tropicalis (tropical clawed frog)	yme1l1	XP_002933186.2
Pan troglodytes (chimpanzee)	YME1L1	XP_507710.3
Mus musculus (house mouse)	Yme1l1	NP_038799.1
Gallus gallus (chicken)	YME1L1	NP_001026683.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009973	XP_319111.4

Gene Ontology
Bibliography

Related articles in PubMed

A new mib allele with a chromosomal deletion covering foxc1a exhibits anterior somite specification defect.
Hsu CH, Lin JS, Po Lai K, Li JW, Chan TF, You MS, Tse WK, Jiang YJ
Scientific reports510673(2015 Jun)

Identification and characterization of YME1L1, a novel paraplegin-related gene.
Coppola M, Pizzigoni A, Banfi S, Bassi MT, Casari G, Incerti B
Genomics66(1)48-54(2000 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Characterization of the human YME1-like 1 ortholog.
Title: Identification and characterization of YME1L1, a novel paraplegin-related gene.

The following yme1l1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the yme1l1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa42696	NM_001331068.1 Latest version!	Danio rerio YME1-like 1b (yme1l1b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

yme1l1b ( NM_001331068.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001317997.1 Danio rerio YME1-like 1b (yme1l1b), mRNA.

Price & Availability↑

CloneID	ODa42696
Clone ID Related Accession (Same CDS sequence)	NM_001331068.1
Accession Version	NM_001331068.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2148bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-09-06
Organism	Danio rerio(zebrafish)
Product	ATP-dependent zinc metalloprotease YME1L1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU681854.5 and CU929547.3. On Sep 8, 2016 this sequence version replaced XM_009296883.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## CDS exon combination :: GDQH01003409.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END##

ATGTTTTCTC TCTCCACTAC CCTACAGCCG CAGGTAACAG TCCAGCTGAG TCACCTCATC 
AATGCTCTGC ACTCGCTGAA GGGGTCAGTG AGCAGCAATA CTTCAGTCAG TCACAAACAC 
AGAGAGAACA CGCCAGAACA AGATCTGAAC AGCACCGAGC CGTCGCTGTC CCTCAGAGAT 
TTGGGTCTGT CAGATCTCGG TCTCGTCCAG ATAGATGAGC TGCTGGAGAA GCTTCTGCCT 
CGTGTTTCTC AGCAGGACTC GCAACTGAAG ACTGTGCCAG ATATCTGGAG GACTTCTCAT 
CTCTCTTCTG ACTCTTTCTT TCACAACAAA CATGGGTTTT CAAGAATGGG TGGTGTCACT 
CCGGTGTTCT CAAGGCAAAA CCAGTCTCCT CTCCAAACTC TCTGCACAGA TCTCAACTAT 
TTACCTTTGT TGGTCCAAAA TCGAGGCTTT AAAACCCTGA AGTCCCGAAC ACGACGCCTG 
CAGGGAGGTT TTGAGGGTCC AGTGGAGCCT GAGGGAATTA CACCGTCATT TATGAAGGGT 
TTCCTCACAC GTGATAAAGG ACCAGACGTT GAAACACTGG AAAAACTCCT TAAAAACAAA 
AATATTCCCG AGGGTCAACA TGATGCTTTT AAGACTGGTT TTGCCGAGGG TTTCCTCAAA 
GCTCAGGCTC TTACACAGAG AACCCAAGAA TCGCTTAGGA GGACCAGACT CATACTGTTG 
GTGCTTCTGC TGGTGGGCTT GTATGGACTC TCCAAAACAC CTTTCTTATC AGTGCGATTC 
CGAACTACAT CAGGCCTGGA CTCTGCTGTG GACCCGGTCC AGATGAAGAA CGTCACCTTT 
GAGCATGTGA AGGGTGTGGA GGAGGCCAAG AACGAGCTGC AGGAGGTGGT GGAGTTCCTG 
AGGAACCCAC AGAAGTTCAC CGTTTTAGGA GGAAAGCTGC CTAAAGGAAT CTTGTTGGTT 
GGGCCTCCGG GAACAGGAAA GACCCTGTTG GCACGTGCTG TGGCGGGTGA GGCGGATGTG 
CCTTTCTACT ACGCATCTGG ATCAGAGTTT GATGAGATGT TTGTTGGAGT CGGTGCCAGT 
CGAATCAGAA ACCTTTTCAG AGAAGCTAAA GGAAACGCTC CTTGTGTTAT CTTCATTGAT 
GAGCTGGACA GTGTCGGAGG AAAGAGGATC GAGTCTCCCA TGCACCCCTA TTCTAGACAG 
ACAATCAATC AGCTGCTTGC AGAAATGGAC GGGTTCAAGC CAAATGAAGG CGTCATCATA 
ATTGGAGCAA CAAACTTCCC TGAAGCTTTG GATAATGCTC TGATCCGGCC CGGTCGTTTC 
GATATGCAGG TCACTGTACC CAGACCAGAT GTGAAGGGCC GCACAGAAAT CCTCAAGTGG 
TACCTTAAAA AAATTAAAGT GGACTCCGCT GTGGAGGCAG AGGTCATTGC TCGAGGAACG 
GTTGGCTTCT CTGGTGCCGA GCTGGAGAAT CTGGTAAATC AGGCTGCACT CAAGGCTGCT 
GTGGACGGCA AAGACATGGT GACCATGAAG GAGCTGGAGT TTGCTAAAGA CAAGATACTG 
ATGGGGCCAG AACGCAGGAG TGCAGAGATC GACAAGAGGA ATAAAGAGAT CACGGCGTAC 
CACGAGTCAG GCCATGCTAT TATTGCGTAC TACACCAAAG ACGCCATGCC CATTAATAAA 
GCTACTATTA TGCCCAGAGG CCCAACTTTG GGTCATGTGT CCATGCTTCC AGAGAATGAC 
CGCTGGAGTG AAACCCGTGC TCAGCTTCTG GCTCAGATGG ATGTCAGTAT GGGCGGTCGA 
GTTGCAGAGG AGCTCATTTT TGGCAATGAA AATATCACCA CAGGAGCATC AAGTGACTTT 
GACAGCGCTA CAAAAATAGC TAAAATGATG GTGACCAGAT TTGGCATGAG TGAAAAGTTG 
GGTGTGATGA CATACAGCGA CCTCACCAAG CAGAGCCCAG AAACTCAGGC AGCCATTGAA 
CATGAAGTTC GGATACTTCT GAGGGATTCC TACGAGCGTG CTAAAGCTCT CCTGAAGTCC 
CGCGCTAAAG AGCACAGAAA CCTGGCGGAG GCTTTACTGC GCTACGAGAC ATTGGATGCC 
AAAGAGATTC AGCTGGTCTT GGAGGGAAAG GCTATAAACA GCAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001317997.1
CDS	100..2247
Translation	MFSLSTTLQPQVTVQLSHLINALHSLKGSVSSNTSVSHKHRENTPEQDLNSTEPSLSLRDLGLSDLGLVQIDELLEKLLPRVSQQDSQLKTVPDIWRTSHLSSDSFFHNKHGFSRMGGVTPVFSRQNQSPLQTLCTDLNYLPLLVQNRGFKTLKSRTRRLQGGFEGPVEPEGITPSFMKGFLTRDKGPDVETLEKLLKNKNIPEGQHDAFKTGFAEGFLKAQALTQRTQESLRRTRLILLVLLLVGLYGLSKTPFLSVRFRTTSGLDSAVDPVQMKNVTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLKKIKVDSAVEAEVIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFAKDKILMGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSMLPENDRWSETRAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDSATKIAKMMVTRFGMSEKLGVMTYSDLTKQSPETQAAIEHEVRILLRDSYERAKALLKSRAKEHRNLAEALLRYETLDAKEIQLVLEGKAINSR

Target ORF information:

RefSeq Version	NM_001331068.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio YME1-like 1b (yme1l1b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001331068.1

ORF Insert Sequence:

ATGTTTTCTC TCTCCACTAC CCTACAGCCG CAGGTAACAG TCCAGCTGAG TCACCTCATC 
AATGCTCTGC ACTCGCTGAA GGGGTCAGTG AGCAGCAATA CTTCAGTCAG TCACAAACAC 
AGAGAGAACA CGCCAGAACA AGATCTGAAC AGCACCGAGC CGTCGCTGTC CCTCAGAGAT 
TTGGGTCTGT CAGATCTCGG TCTCGTCCAG ATAGATGAGC TGCTGGAGAA GCTTCTGCCT 
CGTGTTTCTC AGCAGGACTC GCAACTGAAG ACTGTGCCAG ATATCTGGAG GACTTCTCAT 
CTCTCTTCTG ACTCTTTCTT TCACAACAAA CATGGGTTTT CAAGAATGGG TGGTGTCACT 
CCGGTGTTCT CAAGGCAAAA CCAGTCTCCT CTCCAAACTC TCTGCACAGA TCTCAACTAT 
TTACCTTTGT TGGTCCAAAA TCGAGGCTTT AAAACCCTGA AGTCCCGAAC ACGACGCCTG 
CAGGGAGGTT TTGAGGGTCC AGTGGAGCCT GAGGGAATTA CACCGTCATT TATGAAGGGT 
TTCCTCACAC GTGATAAAGG ACCAGACGTT GAAACACTGG AAAAACTCCT TAAAAACAAA 
AATATTCCCG AGGGTCAACA TGATGCTTTT AAGACTGGTT TTGCCGAGGG TTTCCTCAAA 
GCTCAGGCTC TTACACAGAG AACCCAAGAA TCGCTTAGGA GGACCAGACT CATACTGTTG 
GTGCTTCTGC TGGTGGGCTT GTATGGACTC TCCAAAACAC CTTTCTTATC AGTGCGATTC 
CGAACTACAT CAGGCCTGGA CTCTGCTGTG GACCCGGTCC AGATGAAGAA CGTCACCTTT 
GAGCATGTGA AGGGTGTGGA GGAGGCCAAG AACGAGCTGC AGGAGGTGGT GGAGTTCCTG 
AGGAACCCAC AGAAGTTCAC CGTTTTAGGA GGAAAGCTGC CTAAAGGAAT CTTGTTGGTT 
GGGCCTCCGG GAACAGGAAA GACCCTGTTG GCACGTGCTG TGGCGGGTGA GGCGGATGTG 
CCTTTCTACT ACGCATCTGG ATCAGAGTTT GATGAGATGT TTGTTGGAGT CGGTGCCAGT 
CGAATCAGAA ACCTTTTCAG AGAAGCTAAA GGAAACGCTC CTTGTGTTAT CTTCATTGAT 
GAGCTGGACA GTGTCGGAGG AAAGAGGATC GAGTCTCCCA TGCACCCCTA TTCTAGACAG 
ACAATCAATC AGCTGCTTGC AGAAATGGAC GGGTTCAAGC CAAATGAAGG CGTCATCATA 
ATTGGAGCAA CAAACTTCCC TGAAGCTTTG GATAATGCTC TGATCCGGCC CGGTCGTTTC 
GATATGCAGG TCACTGTACC CAGACCAGAT GTGAAGGGCC GCACAGAAAT CCTCAAGTGG 
TACCTTAAAA AAATTAAAGT GGACTCCGCT GTGGAGGCAG AGGTCATTGC TCGAGGAACG 
GTTGGCTTCT CTGGTGCCGA GCTGGAGAAT CTGGTAAATC AGGCTGCACT CAAGGCTGCT 
GTGGACGGCA AAGACATGGT GACCATGAAG GAGCTGGAGT TTGCTAAAGA CAAGATACTG 
ATGGGGCCAG AACGCAGGAG TGCAGAGATC GACAAGAGGA ATAAAGAGAT CACGGCGTAC 
CACGAGTCAG GCCATGCTAT TATTGCGTAC TACACCAAAG ACGCCATGCC CATTAATAAA 
GCTACTATTA TGCCCAGAGG CCCAACTTTG GGTCATGTGT CCATGCTTCC AGAGAATGAC 
CGCTGGAGTG AAACCCGTGC TCAGCTTCTG GCTCAGATGG ATGTCAGTAT GGGCGGTCGA 
GTTGCAGAGG AGCTCATTTT TGGCAATGAA AATATCACCA CAGGAGCATC AAGTGACTTT 
GACAGCGCTA CAAAAATAGC TAAAATGATG GTGACCAGAT TTGGCATGAG TGAAAAGTTG 
GGTGTGATGA CATACAGCGA CCTCACCAAG CAGAGCCCAG AAACTCAGGC AGCCATTGAA 
CATGAAGTTC GGATACTTCT GAGGGATTCC TACGAGCGTG CTAAAGCTCT CCTGAAGTCC 
CGCGCTAAAG AGCACAGAAA CCTGGCGGAG GCTTTACTGC GCTACGAGAC ATTGGATGCC 
AAAGAGATTC AGCTGGTCTT GGAGGGAAAG GCTATAAACA GCAGATGA