mtx1a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	mtx1a
Entrez Gene ID	556917
Full Name	metaxin 1a
General protein information	Preferred Names metaxin 1a Names metaxin 1a
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001128238.1	NP_001121710.1	metaxin 1a

Pathways from BioSystems

Homologies

	LOC717595	XP_002808288.1
Bos taurus (cattle)	MTX1	NP_001035698.1
Danio rerio (zebrafish)	mtx1b	NP_001007281.1
Drosophila melanogaster (fruit fly)	CG9393	NP_649908.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003981	XP_318431.5
Homo sapiens (human)	MTX1	NP_002446.2
Pan troglodytes (chimpanzee)	MTX1	XP_003308483.1
Rattus norvegicus (Norway rat)	Mtx1	NP_001094137.1
Canis lupus familiaris (dog)	MTX1	XP_537253.2
Mus musculus (house mouse)	Mtx1	NP_038632.2
Danio rerio (zebrafish)	mtx1a	NP_001121710.1
Caenorhabditis elegans (roundworm)	mtx-1	NP_493569.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Phylogenomic analysis of vertebrate thrombospondins reveals fish-specific paralogues, ancestral gene relationships and a tetrapod innovation.
McKenzie P, Chadalavada SC, Bohrer J, Adams JC
BMC evolutionary biology633(2006 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following mtx1a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the mtx1a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa30740	NM_001128238.1 Latest version!	Danio rerio metaxin 1a (mtx1a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

mtx1a ( NM_001128238.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001121710.1 Danio rerio metaxin 1a (mtx1a), mRNA.

Price & Availability↑

CloneID	ODa30740
Clone ID Related Accession (Same CDS sequence)	NM_001128238.1
Accession Version	NM_001128238.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 960bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	metaxin 1a
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EF202556.1. On Jul 31, 2008 this sequence version replaced XM_679851.3. ##Evidence-Data-START## Transcript exon combination :: EF202556.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGCGGCGC CCTGTGAGCT GTTTTGCTGG AAGGCTGGTT TGGGTTTACC GTCAGTAAAC 
ACAGATTGTC TCATCGTATT GGCATACGCT CGCTTTGCTG GAGCTCCACT CAAAATTCAC 
AAGATCTCTA ACCCCTGGAG AAGCCCTACA GGTTCACTTC CAGCTCTTAG GACCAAGGAT 
GAAGGCAGCT GCTCACAACC CAGTCAGATC ATCATTCAGC TGAGAAAACA GAAATTTAAT 
GCAGACTACG ATCTCTCGGC CAAAGAGGGT GCAGACACAC TGGCCTTTAT CTCTCTGCTG 
GAGGAGCGAC TGTTGCCGGC GCTGATCTAC GCATTATGGA TTGATCCTAA GAACTATGTG 
GAAGTGACAC GCCGCTGGTA CGGAGAGAAT ATGAGCTTCC CTCTTAACTT CTTCCTGCCG 
GGCCGCATGC AGAACAGGCA GCTGGAGCGA CTCCGACTGA TCCGAGGAAA CGGCACACTC 
GAGGCCGGAG AAGAGGCAGA GAAGGAGCTT TACCATGATG CTCTGGAGTG CCTGAATCTT 
CTCTCTCAGC GCCTGGGATC AAACAAATTT TTCTTTGGAG ATTCGCCATC TTCTCTGGAT 
GCGTATGTGT TTGGTCATCT AGCGCCGCTT TTTAAGATCC GGCTGCCTAA CTGCAGACTA 
CAGCAGAACT TGAAGAACCT GGACAACCTG AACACATTCT GCTCTAACAT ACTGTCTCTC 
TACTTTCCCA ATGAAAGTAT AGAGGGCGTC AGTCGTCCGG TGTCCAGCAC GCAGCCGGGA 
AGCGACTTGG ACAATGAGCC ATACAAGAGA CGCAAGCAGC TGCTGTCCGT GCTGGTTGCG 
GTCGCAGCTA TGTTGAGTTA TGCACTATTC ACCGGCATAG TGGCTATTGA GCATGTGCAG 
GAGGAGGAGC CTGTAGGCTC ACACATAGGC CCCTCCCATG AGGAAGAAGA GGAGGTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001121710.1
CDS	13..972
Translation	MAAPCELFCWKAGLGLPSVNTDCLIVLAYARFAGAPLKIHKISNPWRSPTGSLPALRTKDEGSCSQPSQIIIQLRKQKFNADYDLSAKEGADTLAFISLLEERLLPALIYALWIDPKNYVEVTRRWYGENMSFPLNFFLPGRMQNRQLERLRLIRGNGTLEAGEEAEKELYHDALECLNLLSQRLGSNKFFFGDSPSSLDAYVFGHLAPLFKIRLPNCRLQQNLKNLDNLNTFCSNILSLYFPNESIEGVSRPVSSTQPGSDLDNEPYKRRKQLLSVLVAVAAMLSYALFTGIVAIEHVQEEEPVGSHIGPSHEEEEEV

Target ORF information:

RefSeq Version	NM_001128238.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio metaxin 1a (mtx1a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001128238.1

ORF Insert Sequence:

ATGGCGGCGC CCTGTGAGCT GTTTTGCTGG AAGGCTGGTT TGGGTTTACC GTCAGTAAAC 
ACAGATTGTC TCATCGTATT GGCATACGCT CGCTTTGCTG GAGCTCCACT CAAAATTCAC 
AAGATCTCTA ACCCCTGGAG AAGCCCTACA GGTTCACTTC CAGCTCTTAG GACCAAGGAT 
GAAGGCAGCT GCTCACAACC CAGTCAGATC ATCATTCAGC TGAGAAAACA GAAATTTAAT 
GCAGACTACG ATCTCTCGGC CAAAGAGGGT GCAGACACAC TGGCCTTTAT CTCTCTGCTG 
GAGGAGCGAC TGTTGCCGGC GCTGATCTAC GCATTATGGA TTGATCCTAA GAACTATGTG 
GAAGTGACAC GCCGCTGGTA CGGAGAGAAT ATGAGCTTCC CTCTTAACTT CTTCCTGCCG 
GGCCGCATGC AGAACAGGCA GCTGGAGCGA CTCCGACTGA TCCGAGGAAA CGGCACACTC 
GAGGCCGGAG AAGAGGCAGA GAAGGAGCTT TACCATGATG CTCTGGAGTG CCTGAATCTT 
CTCTCTCAGC GCCTGGGATC AAACAAATTT TTCTTTGGAG ATTCGCCATC TTCTCTGGAT 
GCGTATGTGT TTGGTCATCT AGCGCCGCTT TTTAAGATCC GGCTGCCTAA CTGCAGACTA 
CAGCAGAACT TGAAGAACCT GGACAACCTG AACACATTCT GCTCTAACAT ACTGTCTCTC 
TACTTTCCCA ATGAAAGTAT AGAGGGCGTC AGTCGTCCGG TGTCCAGCAC GCAGCCGGGA 
AGCGACTTGG ACAATGAGCC ATACAAGAGA CGCAAGCAGC TGCTGTCCGT GCTGGTTGCG 
GTCGCAGCTA TGTTGAGTTA TGCACTATTC ACCGGCATAG TGGCTATTGA GCATGTGCAG 
GAGGAGGAGC CTGTAGGCTC ACACATAGGC CCCTCCCATG AGGAAGAAGA GGAGGTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Phylogenomic analysis of vertebrate thrombospondins reveals fish-specific paralogues, ancestral gene relationships and a tetrapod innovation.
BMC evolutionary biology633(2006 Apr)
McKenzie P,Chadalavada SC,Bohrer J,Adams JC