ighmbp2 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	ighmbp2
Entrez Gene ID	556484
Full Name	immunoglobulin mu binding protein 2
Synonyms	ighmbp2l,si:ch211-238n5.2,zgc:110400
General protein information	Preferred Names immunoglobulin mu binding protein 2 Names DNA-binding protein SMUBP-2 immunoglobulin mu binding protein 2, like
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001044900.1	NP_001038365.1	DNA-binding protein SMUBP-2

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Ighmbp2	NP_113774.1
Danio rerio (zebrafish)	ighmbp2	NP_001038365.1
Magnaporthe oryzae (rice blast fungus)	MGG_11568	XP_003718564.1
Arabidopsis thaliana (thale cress)	AT2G03270	NP_565299.1
Canis lupus familiaris (dog)	IGHMBP2	XP_540807.2
Bos taurus (cattle)	IGHMBP2	XP_003588118.1
Xenopus tropicalis (tropical clawed frog)	ighmbp2	XP_002936547.2
Homo sapiens (human)	IGHMBP2	NP_002171.2
Pan troglodytes (chimpanzee)	IGHMBP2	XP_508608.3
	IGHMBP2	XP_001117732.1
Mus musculus (house mouse)	Ighmbp2	NP_033238.2
Saccharomyces cerevisiae (baker's yeast)	HCS1	NP_012908.1
Kluyveromyces lactis	KLLA0E18085g	XP_454766.1
Schizosaccharomyces pombe (fission yeast)	SPCC737.07c	NP_588369.1
Neurospora crassa	NCU07395	XP_958479.1
Oryza sativa (rice)	Os03g0586900	NP_001050573.1
Eremothecium gossypii	AGOS_ACL098C	NP_983306.2

Gene Ontology
Bibliography

Related articles in PubMed

15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis.
Lo J, Lee S, Xu M, Liu F, Ruan H, Eun A, He Y, Ma W, Wang W, Wen Z, Peng J
Genome research13(3)455-66(2003 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ighmbp2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ighmbp2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa31550	NM_001044900.1 Latest version!	Danio rerio immunoglobulin mu DNA binding protein 2 (ighmbp2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ighmbp2 ( NM_001044900.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001038365.1 Danio rerio immunoglobulin mu DNA binding protein 2 (ighmbp2), mRNA.

Price & Availability↑

CloneID	ODa31550
Clone ID Related Accession (Same CDS sequence)	NM_001044900.1
Accession Version	NM_001044900.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2994bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-06-26
Organism	Danio rerio(zebrafish)
Product	DNA-binding protein SMUBP-2
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX470166.11. On Jan 10, 2007 this sequence version replaced XM_683012.1. ##Evidence-Data-START## Transcript exon combination :: BC171648.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGAGGTTG AAAATTTCGT TTCAAAAACT CTTGAGCTCC TACAAGAAGA GAGAGAAGCT 
GAACTGGAAG AAACACGCGC ATGGCAGGAG AATGTGTCTC TCAAGAATCT ACAGCACAAA 
GGAGTGTGTC TGATGAAACT TCAGATCGGA AGCCAGCACA CTGGAATGTA TGGCAGACTT 
CTAGTCATTT TTGAACCCAG GAAATGCATA GGGCTCTCAG TTCTACCCAG CAACACTTTT 
GGACCTGGTG ATATTATAGG CTTGTATCAG GCAGAGGGTC AGGCTCTGCC TACTCAGTTG 
GGGTCAGGTG TGGTGACTCG TGCTACTCAA GCATCTCTGA CGGTGGCTTT TGATGACACA 
CAGGATGGTA CTAATTTAGA CAGAGATGGA CTCTACAACC TAATGAAACT GGCAAATGAT 
GTGACCTACA GGCGGCTGTC AAGTGCACTA AAGTCTTTAA ATGGATACAG CAACGGTCCT 
GCATCTCACC TGATCAGTGT TCTTTTTGGT TACTCTCAAC CAGGGATCTT ATCACATCTG 
TATGCATTGG AATTTAACAA CACCAAGTTA GATGATTCTC AGAAAGAGGC TGTGTCGTTT 
GCAATATCTC AAAAAGATGT TGCAATCATA CATGGACCAC CAGGCACTGG CAAAACTACT 
ACAGTGGTTG AAGTGATCCT GCAGGCAGTG AAACAACAAC AAAAGGTCTT GTGCTGCGCT 
CCTTCAAATG TGGCTGTTGA TAACTTGGTG GAGCGTCTGG CGAAGAATAA GGTCAAGGTT 
TTAAGACTGG GTCACCCAGC ACGTCTGCTC GAGTCTATTC AGAAACACTC GCTGGATGCG 
GTCCTTGCAC ACAGTGACAA CACCAACATC ATTTCTGATA TTCGCAAAGA CATGGACAAA 
GCGTTTAATG AAATTAAGAA GGCACGCGAC AAAGGCCAGC GGAGCAATCT GAGACGGGAA 
ATCGGGGAAC TGCGGCGAGA GCTGAGGACC AGAGAGGAAA CTGCTATCAG TCAGATCCTG 
AAAAGAGCCG ATGTTATTCT AGCAACGAAC ACTGGAGCCT CTGATGACGG TCCTCTTAAA 
CATCTTCCTA ATGATCATTT TGACCTGGTG GTGATAGATG AGTGCGCTCA GGCTCTGGAG 
AGCAGCTGTT GGATCGCTCT GCTTAAAGCA CGCAAATGTA TACTGGCTGG GGATTACAAA 
CAGCTGCCGC CCACTATCAA ATCACAGAGT GCTGCATCTA AAGGCCTGTC TGTCAGTTTA 
ATGGAGAGGC TGATCAAGAA ATATGGAGAC TCGGTGGTTC GAATGCTGAC CACACAGTAC 
CGTATGAACA GTGCCATCAT GCAGTGGGCT TCAGAGCAGA TGTATCAGGG AAAACTCATT 
GCACATCCTT CAGTGGAGAA GCACTTGCTT AGAGACCTGG CAGGTGTTGC GGATGTTGAG 
GAAACCAGAA TTCCTCTTCT GCTCGTTGAC ACTGCAGGCT GTGGACTGAA TGAGATGGAG 
AACACAGATG AGCAGTCCAA AGGGAATCAA GGAGAAGTGG ATATTGTGGC TCTTCATATC 
AAAGCTCTTA CCGAGGCTGG AGTTCAAGTC AAAGACATTG CGATTATTGC TCCCTATAAT 
CTTCAGGTGG ATCTTTTGAG GCAGAAACTG TCCCATAAAT ATGCAGAGCT GGAAATTAAG 
TCTGTTGATG GCTTCCAGGG CAGAGAGAAG GAGGCAGTGG TGTTGTCATT GGTCAGATCC 
AACAGGAAGG GTGAGGTTGG CTTTCTTGCT GAAGACCGAA GGATCAATGT GGCTGTGACT 
CGTGCCAGAC GGCAGCTCGT TGTGGTTTGT GATTCTCAAA CGGTTCGAAA CCACGACTTC 
CTCAAATCAC TAGTGGACTA TATGTCTAAG CATGGAGAAC TTCGCACCGC CTTTGAGTAC 
CTGGAAGACT GTGTAGCGCA GAATTACACT CGTGATGAAA AGGACAAACA GAACAAAGGT 
AAAGACACCA CATCCGCAAA GCAGAAGACC AAGAAGCAGG ACAAGAAGCC AGAGCAGGAA 
CACAAGAAAA GTGCAAACAA CAAAAACAGT GGAGCCAATC AGTCCGGTGT TCATCATAAT 
AACACCAATT CACACCATCC TAAACCCAAA GATGCAGATC AGACGCAAAG TAAAAGAAAG 
GAGATCAAGG AGCAACTTTT GAACTTTCTT AAAGATCCAG ACAAGACAGA ACTAGAGTTT 
CCTTCCACTT TAAATTCCCA TGATCGTCTA CTGGTCCATG AGCTCTCTGA AGAAATTGGT 
TTGAGGCACG AAAGCCAGGG AGAAGGGAAA AGCCGCCACA TCACTGTGTC CCGGTCTCCA 
TCAGGACTCG GTAATGAGCC TAAACCTGAT AAACCAGATG AAGCCCCATG TACAGTTGCA 
AATGTACAAG AAGAGTCACC AAATAAACCC TCGCAGCCAA CCGTTGATCT GAAAAGCCTA 
CATTTGGAGC GCATGCGACG AGAGCAGGAG AAACGAGAGG AGAAAAAACA GCAAAAACAA 
CAGAGTGCCA GACCGGAACC AAATTTTACT GCTAGTAAAA GCCAGTTCGT TAAGAAACCT 
AAAGGAACTT CCAAAGGAAC TTCAAAGATA AAAGCAGGAG CCACAGATAT TGCTGCGGCT 
GCCAATGGAG ATGATGATTT TGATGCTCTC ATCAATGCTG TGGTTAAAGC AGAAAGTGTG 
TGTGGTTTTG TGAAATGCAA AGCCAGTGTG CTGACGCTAG GACAACTCTG CATTTACTGT 
AACAGACAGT ACTGCTTGAG TCACCATATA CCCGAGGTTC ACGGATGTGG AGACAAGGCA 
AAATCTCAGG CTAGAATGAG GATAAGCAAA GAAGGAGTGC TCTACGCAGG AAGTGGACAG 
AAGGACAAAT CAGTGGATCC AAACAAAAAA GCATATCTAC AGAGAAAACT AGACTCTAAA 
CTCAAAGATA TGGTGTCACA GAGAAAAACA AAAGCCAAAG ACAAAGAAAA CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001038365.1
CDS	113..3106
Translation	MEVENFVSKTLELLQEEREAELEETRAWQENVSLKNLQHKGVCLMKLQIGSQHTGMYGRLLVIFEPRKCIGLSVLPSNTFGPGDIIGLYQAEGQALPTQLGSGVVTRATQASLTVAFDDTQDGTNLDRDGLYNLMKLANDVTYRRLSSALKSLNGYSNGPASHLISVLFGYSQPGILSHLYALEFNNTKLDDSQKEAVSFAISQKDVAIIHGPPGTGKTTTVVEVILQAVKQQQKVLCCAPSNVAVDNLVERLAKNKVKVLRLGHPARLLESIQKHSLDAVLAHSDNTNIISDIRKDMDKAFNEIKKARDKGQRSNLRREIGELRRELRTREETAISQILKRADVILATNTGASDDGPLKHLPNDHFDLVVIDECAQALESSCWIALLKARKCILAGDYKQLPPTIKSQSAASKGLSVSLMERLIKKYGDSVVRMLTTQYRMNSAIMQWASEQMYQGKLIAHPSVEKHLLRDLAGVADVEETRIPLLLVDTAGCGLNEMENTDEQSKGNQGEVDIVALHIKALTEAGVQVKDIAIIAPYNLQVDLLRQKLSHKYAELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRARRQLVVVCDSQTVRNHDFLKSLVDYMSKHGELRTAFEYLEDCVAQNYTRDEKDKQNKGKDTTSAKQKTKKQDKKPEQEHKKSANNKNSGANQSGVHHNNTNSHHPKPKDADQTQSKRKEIKEQLLNFLKDPDKTELEFPSTLNSHDRLLVHELSEEIGLRHESQGEGKSRHITVSRSPSGLGNEPKPDKPDEAPCTVANVQEESPNKPSQPTVDLKSLHLERMRREQEKREEKKQQKQQSARPEPNFTASKSQFVKKPKGTSKGTSKIKAGATDIAAAANGDDDFDALINAVVKAESVCGFVKCKASVLTLGQLCIYCNRQYCLSHHIPEVHGCGDKAKSQARMRISKEGVLYAGSGQKDKSVDPNKKAYLQRKLDSKLKDMVSQRKTKAKDKEN

Target ORF information:

RefSeq Version	NM_001044900.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio immunoglobulin mu DNA binding protein 2 (ighmbp2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001044900.1

ORF Insert Sequence:

ATGGAGGTTG AAAATTTCGT TTCAAAAACT CTTGAGCTCC TACAAGAAGA GAGAGAAGCT 
GAACTGGAAG AAACACGCGC ATGGCAGGAG AATGTGTCTC TCAAGAATCT ACAGCACAAA 
GGAGTGTGTC TGATGAAACT TCAGATCGGA AGCCAGCACA CTGGAATGTA TGGCAGACTT 
CTAGTCATTT TTGAACCCAG GAAATGCATA GGGCTCTCAG TTCTACCCAG CAACACTTTT 
GGACCTGGTG ATATTATAGG CTTGTATCAG GCAGAGGGTC AGGCTCTGCC TACTCAGTTG 
GGGTCAGGTG TGGTGACTCG TGCTACTCAA GCATCTCTGA CGGTGGCTTT TGATGACACA 
CAGGATGGTA CTAATTTAGA CAGAGATGGA CTCTACAACC TAATGAAACT GGCAAATGAT 
GTGACCTACA GGCGGCTGTC AAGTGCACTA AAGTCTTTAA ATGGATACAG CAACGGTCCT 
GCATCTCACC TGATCAGTGT TCTTTTTGGT TACTCTCAAC CAGGGATCTT ATCACATCTG 
TATGCATTGG AATTTAACAA CACCAAGTTA GATGATTCTC AGAAAGAGGC TGTGTCGTTT 
GCAATATCTC AAAAAGATGT TGCAATCATA CATGGACCAC CAGGCACTGG CAAAACTACT 
ACAGTGGTTG AAGTGATCCT GCAGGCAGTG AAACAACAAC AAAAGGTCTT GTGCTGCGCT 
CCTTCAAATG TGGCTGTTGA TAACTTGGTG GAGCGTCTGG CGAAGAATAA GGTCAAGGTT 
TTAAGACTGG GTCACCCAGC ACGTCTGCTC GAGTCTATTC AGAAACACTC GCTGGATGCG 
GTCCTTGCAC ACAGTGACAA CACCAACATC ATTTCTGATA TTCGCAAAGA CATGGACAAA 
GCGTTTAATG AAATTAAGAA GGCACGCGAC AAAGGCCAGC GGAGCAATCT GAGACGGGAA 
ATCGGGGAAC TGCGGCGAGA GCTGAGGACC AGAGAGGAAA CTGCTATCAG TCAGATCCTG 
AAAAGAGCCG ATGTTATTCT AGCAACGAAC ACTGGAGCCT CTGATGACGG TCCTCTTAAA 
CATCTTCCTA ATGATCATTT TGACCTGGTG GTGATAGATG AGTGCGCTCA GGCTCTGGAG 
AGCAGCTGTT GGATCGCTCT GCTTAAAGCA CGCAAATGTA TACTGGCTGG GGATTACAAA 
CAGCTGCCGC CCACTATCAA ATCACAGAGT GCTGCATCTA AAGGCCTGTC TGTCAGTTTA 
ATGGAGAGGC TGATCAAGAA ATATGGAGAC TCGGTGGTTC GAATGCTGAC CACACAGTAC 
CGTATGAACA GTGCCATCAT GCAGTGGGCT TCAGAGCAGA TGTATCAGGG AAAACTCATT 
GCACATCCTT CAGTGGAGAA GCACTTGCTT AGAGACCTGG CAGGTGTTGC GGATGTTGAG 
GAAACCAGAA TTCCTCTTCT GCTCGTTGAC ACTGCAGGCT GTGGACTGAA TGAGATGGAG 
AACACAGATG AGCAGTCCAA AGGGAATCAA GGAGAAGTGG ATATTGTGGC TCTTCATATC 
AAAGCTCTTA CCGAGGCTGG AGTTCAAGTC AAAGACATTG CGATTATTGC TCCCTATAAT 
CTTCAGGTGG ATCTTTTGAG GCAGAAACTG TCCCATAAAT ATGCAGAGCT GGAAATTAAG 
TCTGTTGATG GCTTCCAGGG CAGAGAGAAG GAGGCAGTGG TGTTGTCATT GGTCAGATCC 
AACAGGAAGG GTGAGGTTGG CTTTCTTGCT GAAGACCGAA GGATCAATGT GGCTGTGACT 
CGTGCCAGAC GGCAGCTCGT TGTGGTTTGT GATTCTCAAA CGGTTCGAAA CCACGACTTC 
CTCAAATCAC TAGTGGACTA TATGTCTAAG CATGGAGAAC TTCGCACCGC CTTTGAGTAC 
CTGGAAGACT GTGTAGCGCA GAATTACACT CGTGATGAAA AGGACAAACA GAACAAAGGT 
AAAGACACCA CATCCGCAAA GCAGAAGACC AAGAAGCAGG ACAAGAAGCC AGAGCAGGAA 
CACAAGAAAA GTGCAAACAA CAAAAACAGT GGAGCCAATC AGTCCGGTGT TCATCATAAT 
AACACCAATT CACACCATCC TAAACCCAAA GATGCAGATC AGACGCAAAG TAAAAGAAAG 
GAGATCAAGG AGCAACTTTT GAACTTTCTT AAAGATCCAG ACAAGACAGA ACTAGAGTTT 
CCTTCCACTT TAAATTCCCA TGATCGTCTA CTGGTCCATG AGCTCTCTGA AGAAATTGGT 
TTGAGGCACG AAAGCCAGGG AGAAGGGAAA AGCCGCCACA TCACTGTGTC CCGGTCTCCA 
TCAGGACTCG GTAATGAGCC TAAACCTGAT AAACCAGATG AAGCCCCATG TACAGTTGCA 
AATGTACAAG AAGAGTCACC AAATAAACCC TCGCAGCCAA CCGTTGATCT GAAAAGCCTA 
CATTTGGAGC GCATGCGACG AGAGCAGGAG AAACGAGAGG AGAAAAAACA GCAAAAACAA 
CAGAGTGCCA GACCGGAACC AAATTTTACT GCTAGTAAAA GCCAGTTCGT TAAGAAACCT 
AAAGGAACTT CCAAAGGAAC TTCAAAGATA AAAGCAGGAG CCACAGATAT TGCTGCGGCT 
GCCAATGGAG ATGATGATTT TGATGCTCTC ATCAATGCTG TGGTTAAAGC AGAAAGTGTG 
TGTGGTTTTG TGAAATGCAA AGCCAGTGTG CTGACGCTAG GACAACTCTG CATTTACTGT 
AACAGACAGT ACTGCTTGAG TCACCATATA CCCGAGGTTC ACGGATGTGG AGACAAGGCA 
AAATCTCAGG CTAGAATGAG GATAAGCAAA GAAGGAGTGC TCTACGCAGG AAGTGGACAG 
AAGGACAAAT CAGTGGATCC AAACAAAAAA GCATATCTAC AGAGAAAACT AGACTCTAAA 
CTCAAAGATA TGGTGTCACA GAGAAAAACA AAAGCCAAAG ACAAAGAAAA CTGA