tmed1a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	tmed1a
Entrez Gene ID	445093
Full Name	transmembrane p24 trafficking protein 1a
Synonyms	tmed1,zgc:92038
General protein information	Preferred Names transmembrane p24 trafficking protein 1a Names transmembrane emp24 domain-containing protein 1 p24 gamma 1a transmembrane emp24 protein transport domain containing 1 transmembrane emp24 protein transport domain containing 1a
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001003487.1	NP_001003487.1	transmembrane emp24 domain-containing protein 1 precursor

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	TMED1	XP_005632947.1
Homo sapiens (human)	TMED1	NP_006849.1
Pan troglodytes (chimpanzee)	TMED1	XP_512383.3
Bos taurus (cattle)	TMED1	NP_001033652.1
Mus musculus (house mouse)	Tmed1	NP_034874.2
Rattus norvegicus (Norway rat)	Tmed1	NP_001013450.1
	TMED1	XP_001103770.1
Danio rerio (zebrafish)	tmed1a	NP_001003487.1
Xenopus tropicalis (tropical clawed frog)	tmed1	NP_001039263.1
Danio rerio (zebrafish)	tmed1b	NP_001074109.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Evolutionary evidence of tumor necrosis factor super family members in the Japanese pufferfish (Takifugu rubripes): Comprehensive genomic identification and expression analysis.
Biswas G, Kinoshita S, Kono T, Hikima J, Sakai M
Marine genomics2225-36(2015 Aug)

A comprehensive overview of the vertebrate p24 family: identification of a novel tissue-specifically expressed member.
Strating JR, van Bakel NH, Leunissen JA, Martens GJ
Molecular biology and evolution26(8)1707-14(2009 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following tmed1a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tmed1a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa31424	NM_001003487.1 Latest version!	Danio rerio transmembrane p24 trafficking protein 1a (tmed1a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

tmed1a ( NM_001003487.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001003487.1 Danio rerio transmembrane p24 trafficking protein 1a (tmed1a), mRNA.

Price & Availability↑

CloneID	ODa31424
Clone ID Related Accession (Same CDS sequence)	NM_001003487.1
Accession Version	NM_001003487.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 681bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-08-05
Organism	Danio rerio(zebrafish)
Product	transmembrane emp24 domain-containing protein 1 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078377.1. ##Evidence-Data-START## Transcript exon combination :: BC078377.1, EH495051.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476754, SAMEA4476789 [ECO:0000348] ##Evidence-Data-END##

ATGGACGAGA CGCGTCTCGC GGTTTGTTTT CTATCCTTCC TGACGCTCTG TCTGGATTTG 
GGATTCACTT TCGGACAGAA TAAAGACACC GAGTTCACCT TCCTTCTGCC TGCTGGAGCA 
ACCGAGTGCT TCTTCCAGAC GGCCACCAAG AACAGCAGCA TGGAAGTGGA GTACCAGGTG 
ATCGCAGGCT CAGGACTGGA CGTGGGCTTC ACTCTGATCT CCCCCCGGGG GTACAGACTG 
GTCTCAGACT TCAGAAAATC TGACGGCATC CACACTGTTG ACTCCACTGA GGAGGGCGAC 
TACCGGATCT GCTTTGACAA CAGCTTCAGC CGTATATCGG AGAAGATGGT GTATGTGGAG 
GTGATCATGG ATGGACCAGA AGGAGAGGAT GAGGATGATG AAGACTGGGC TGCTTTGGCT 
GAACCTGAGG ACTCACTGGA GTACAAACTG GAGGATATCA GGGACTCGAT GGACGCAGTG 
CACAAGAGCC TGGAGCGAAG CCGTCAGCTT CAGACGACAC TGCGGGCGTT CGAGGCTCGT 
GACCGATACC TGCTGGAGGA TAACCTTTGG CGCGTCTCCT TCTGGTCCTG CGCCAGTCTG 
CTGGTGATGA TCAGTGTGGC CCTCACACAG GTCTACACGT TACGCAGATT ATTCAACGAC 
AAACACAAAG TTTGCACATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001003487.1
CDS	128..808
Translation	MDETRLAVCFLSFLTLCLDLGFTFGQNKDTEFTFLLPAGATECFFQTATKNSSMEVEYQVIAGSGLDVGFTLISPRGYRLVSDFRKSDGIHTVDSTEEGDYRICFDNSFSRISEKMVYVEVIMDGPEGEDEDDEDWAALAEPEDSLEYKLEDIRDSMDAVHKSLERSRQLQTTLRAFEARDRYLLEDNLWRVSFWSCASLLVMISVALTQVYTLRRLFNDKHKVCT

Target ORF information:

RefSeq Version	NM_001003487.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio transmembrane p24 trafficking protein 1a (tmed1a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001003487.1

ORF Insert Sequence:

ATGGACGAGA CGCGTCTCGC GGTTTGTTTT CTATCCTTCC TGACGCTCTG TCTGGATTTG 
GGATTCACTT TCGGACAGAA TAAAGACACC GAGTTCACCT TCCTTCTGCC TGCTGGAGCA 
ACCGAGTGCT TCTTCCAGAC GGCCACCAAG AACAGCAGCA TGGAAGTGGA GTACCAGGTG 
ATCGCAGGCT CAGGACTGGA CGTGGGCTTC ACTCTGATCT CCCCCCGGGG GTACAGACTG 
GTCTCAGACT TCAGAAAATC TGACGGCATC CACACTGTTG ACTCCACTGA GGAGGGCGAC 
TACCGGATCT GCTTTGACAA CAGCTTCAGC CGTATATCGG AGAAGATGGT GTATGTGGAG 
GTGATCATGG ATGGACCAGA AGGAGAGGAT GAGGATGATG AAGACTGGGC TGCTTTGGCT 
GAACCTGAGG ACTCACTGGA GTACAAACTG GAGGATATCA GGGACTCGAT GGACGCAGTG 
CACAAGAGCC TGGAGCGAAG CCGTCAGCTT CAGACGACAC TGCGGGCGTT CGAGGCTCGT 
GACCGATACC TGCTGGAGGA TAACCTTTGG CGCGTCTCCT TCTGGTCCTG CGCCAGTCTG 
CTGGTGATGA TCAGTGTGGC CCTCACACAG GTCTACACGT TACGCAGATT ATTCAACGAC 
AAACACAAAG TTTGCACATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Evolutionary evidence of tumor necrosis factor super family members in the Japanese pufferfish (Takifugu rubripes): Comprehensive genomic identification and expression analysis.
Marine genomics2225-36(2015 Aug)
Biswas G,Kinoshita S,Kono T,Hikima J,Sakai M

A comprehensive overview of the vertebrate p24 family: identification of a novel tissue-specifically expressed member.
Molecular biology and evolution26(8)1707-14(2009 Aug)
Strating JR,van Bakel NH,Leunissen JA,Martens GJ