lsm6 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	lsm6
Entrez Gene ID	415167
Full Name	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Synonyms	zgc:92379
General protein information	Preferred Names LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated Names U6 snRNA-associated Sm-like protein LSm6 LSM6 homolog, U6 small nuclear RNA associated
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005159968.4	XP_005160025.1	U6 snRNA-associated Sm-like protein LSm6 isoform X1
XM_005159968.3	XP_005160025.1	U6 snRNA-associated Sm-like protein LSm6 isoform X1
NM_001002077.2	NP_001002077.1	U6 snRNA-associated Sm-like protein LSm6

Pathways from BioSystems

Homologies

Homo sapiens (human)	LSM6	NP_009011.1
Pan troglodytes (chimpanzee)	LSM6	XP_003950473.1
Canis lupus familiaris (dog)	LSM6	XP_003432092.1
Caenorhabditis elegans (roundworm)	lsm-6	NP_490883.1
Mus musculus (house mouse)	Lsm6	NP_001177933.1
Drosophila melanogaster (fruit fly)	CG9344	NP_611528.1
Oryza sativa (rice)	Os02g0510100	NP_001046930.1
Oryza sativa (rice)	Os04g0388900	NP_001052634.1
Rattus norvegicus (Norway rat)	Lsm6	NP_001119557.1
Gallus gallus (chicken)	LSM6	XP_004941025.1
Danio rerio (zebrafish)	lsm6	NP_001002077.1
Arabidopsis thaliana (thale cress)	AT3G59810	NP_191540.1
	LSM6	XP_001097636.1
Bos taurus (cattle)	LSM6	NP_001107991.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP005314	XP_315329.2
Schizosaccharomyces pombe (fission yeast)	lsm6	NP_594380.1
Arabidopsis thaliana (thale cress)	AT2G43810	NP_181909.1
Xenopus tropicalis (tropical clawed frog)	lsm6	NP_001165068.1

Gene Ontology
Bibliography

Related articles in PubMed

Forward Genetic Screens in Zebrafish Identify Pre-mRNA-Processing Pathways Regulating Early T Cell Development.
Iwanami N, Sikora K, Richter AS, M?nnich M, Guerri L, Soza-Ried C, Lawir DF, Mateos F, Hess I, O'Meara CP, Schorpp M, Boehm T
Cell reports17(9)2259-2270(2016 11)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following lsm6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the lsm6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa31839	NM_001002077.2 Latest version!	Danio rerio LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated (lsm6), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa05897	XM_005159968.4 Latest version!	Danio rerio LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated (lsm6), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
View Old Accession Versions >>
ODa05897	XM_005159968.3	Danio rerio LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated (lsm6), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

lsm6 ( NM_001002077.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001002077.1 Danio rerio LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated (lsm6), mRNA.

Price & Availability↑

CloneID	ODa31839
Clone ID Related Accession (Same CDS sequence)	NM_001002077.2
Accession Version	NM_001002077.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 243bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	U6 snRNA-associated Sm-like protein LSm6
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH577307.1, BC072549.1 and EH593457.1. On Aug 14, 2010 this sequence version replaced NM_001002077.1. ##Evidence-Data-START## Transcript exon combination :: EH593457.1, EH547215.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGAGTCTCC GAAAGCAGAC ACCAAGTGAT TTCCTGAAGC AGATCATTGG GAGGCCAGTG 
GTGGTGAAAC TGAACTCTGG TGTCGATTAC AGAGGAGTCC TGGCCTGCCT TGACGGCTAC 
ATGAATATTG CGGTGGAACA GACAGAGGAA TATGTCAACG GCCAACTGAA GAACAAGTAT 
GGAGATGCAT TTCTCAGAGG AAACAATGTG TTATACATCA GCACCCAGAA GAGGAAGATG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001002077.1
CDS	100..342
Translation	MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKYGDAFLRGNNVLYISTQKRKM

Target ORF information:

RefSeq Version	NM_001002077.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated (lsm6), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001002077.2

ORF Insert Sequence:

ATGAGTCTCC GAAAGCAGAC ACCAAGTGAT TTCCTGAAGC AGATCATTGG GAGGCCAGTG 
GTGGTGAAAC TGAACTCTGG TGTCGATTAC AGAGGAGTCC TGGCCTGCCT TGACGGCTAC 
ATGAATATTG CGGTGGAACA GACAGAGGAA TATGTCAACG GCCAACTGAA GAACAAGTAT 
GGAGATGCAT TTCTCAGAGG AAACAATGTG TTATACATCA GCACCCAGAA GAGGAAGATG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

lsm6 ( XM_005159968.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005160025.1 Danio rerio LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated (lsm6), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa05897
Clone ID Related Accession (Same CDS sequence)	XM_005159968.4 , XM_005159968.3
Accession Version	XM_005159968.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 273bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	U6 snRNA-associated Sm-like protein LSm6 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005159968.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTGGTTTA AAATAAACGT CTTTACTAAA ATGAGTCTCC GAAAGCAGAC ACCAAGTGAT 
TTCCTGAAGC AGATCATTGG GAGGCCAGTG GTGGTGAAAC TGAACTCTGG TGTCGATTAC 
AGAGGAGTCC TGGCCTGCCT TGACGGCTAC ATGAATATTG CGGTGGAACA GACAGAGGAA 
TATGTCAACG GCCAACTGAA GAACAAGTAT GGAGATGCAT TTCTCAGAGG AAACAATGTG 
TTATACATCA GCACCCAGAA GAGGAAGATG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005160025.1
CDS	312..584
Translation	MWFKINVFTKMSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKYGDAFLRGNNVLYISTQKRKM

Target ORF information:

RefSeq Version	XM_005159968.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated (lsm6), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005159968.4

ORF Insert Sequence:

ATGTGGTTTA AAATAAACGT CTTTACTAAA ATGAGTCTCC GAAAGCAGAC ACCAAGTGAT 
TTCCTGAAGC AGATCATTGG GAGGCCAGTG GTGGTGAAAC TGAACTCTGG TGTCGATTAC 
AGAGGAGTCC TGGCCTGCCT TGACGGCTAC ATGAATATTG CGGTGGAACA GACAGAGGAA 
TATGTCAACG GCCAACTGAA GAACAAGTAT GGAGATGCAT TTCTCAGAGG AAACAATGTG 
TTATACATCA GCACCCAGAA GAGGAAGATG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

lsm6 ( XM_005159968.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005160025.1 Danio rerio LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated (lsm6), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa05897
Clone ID Related Accession (Same CDS sequence)	XM_005159968.4 , XM_005159968.3
Accession Version	XM_005159968.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 273bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	U6 snRNA-associated Sm-like protein LSm6 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005159968.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTGGTTTA AAATAAACGT CTTTACTAAA ATGAGTCTCC GAAAGCAGAC ACCAAGTGAT 
TTCCTGAAGC AGATCATTGG GAGGCCAGTG GTGGTGAAAC TGAACTCTGG TGTCGATTAC 
AGAGGAGTCC TGGCCTGCCT TGACGGCTAC ATGAATATTG CGGTGGAACA GACAGAGGAA 
TATGTCAACG GCCAACTGAA GAACAAGTAT GGAGATGCAT TTCTCAGAGG AAACAATGTG 
TTATACATCA GCACCCAGAA GAGGAAGATG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005160025.1
CDS	303..575
Translation	MWFKINVFTKMSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKYGDAFLRGNNVLYISTQKRKM

Target ORF information:

RefSeq Version	XM_005159968.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated (lsm6), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005159968.3

ORF Insert Sequence:

ATGTGGTTTA AAATAAACGT CTTTACTAAA ATGAGTCTCC GAAAGCAGAC ACCAAGTGAT 
TTCCTGAAGC AGATCATTGG GAGGCCAGTG GTGGTGAAAC TGAACTCTGG TGTCGATTAC 
AGAGGAGTCC TGGCCTGCCT TGACGGCTAC ATGAATATTG CGGTGGAACA GACAGAGGAA 
TATGTCAACG GCCAACTGAA GAACAAGTAT GGAGATGCAT TTCTCAGAGG AAACAATGTG 
TTATACATCA GCACCCAGAA GAGGAAGATG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Forward Genetic Screens in Zebrafish Identify Pre-mRNA-Processing Pathways Regulating Early T Cell Development.
Cell reports17(9)2259-2270(2016 11)
Iwanami N,Sikora K,Richter AS,M?nnich M,Guerri L,Soza-Ried C,Lawir DF,Mateos F,Hess I,O'Meara CP,Schorpp M,Boehm T

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

- Most Popular Services
  - 人工遺伝子合成& DNA合成-納期保証
- Services & Products

見積依頼

Eメール

[email protected]

電話

03-6811-6572

FAX

03-6811-6573
050-3174-7589(受注専用)

オンラインフォーム

オンライン注文

lsm6 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Most Popular Services

Services & Products

見積依頼

Eメール

電話

FAX

オンラインフォーム