arhgdia cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	arhgdia
Entrez Gene ID	406770
Full Name	Rho GDP dissociation inhibitor (GDI) alpha
Synonyms	wu:fa96g11,zgc:55554,zgc:77681
General protein information	Preferred Names Rho GDP dissociation inhibitor (GDI) alpha Names rho GDP-dissociation inhibitor 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_213461.1	NP_998626.1	rho GDP-dissociation inhibitor 1

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	ARHGDIA	NP_001074340.1
Kluyveromyces lactis	KLLA0F05313g	XP_455321.1
Homo sapiens (human)	ARHGDIA	NP_001172006.1
Pan troglodytes (chimpanzee)	ARHGDIA	NP_001233363.1
Rattus norvegicus (Norway rat)	Arhgdia	NP_001007006.1
Caenorhabditis elegans (roundworm)	rhi-1	NP_508774.1
Schizosaccharomyces pombe (fission yeast)	SPAC6F12.06	NP_593292.1
Arabidopsis thaliana (thale cress)	SCN1	NP_187445.1
Oryza sativa (rice)	Os06g0318300	NP_001057502.1
Bos taurus (cattle)	ARHGDIA	NP_788823.1
Mus musculus (house mouse)	Arhgdia	NP_598557.3
Drosophila melanogaster (fruit fly)	RhoGDI	NP_001262080.1
Saccharomyces cerevisiae (baker's yeast)	RDI1	NP_010146.1
Eremothecium gossypii	AGOS_ADR098C	NP_984194.1
Neurospora crassa	NCU06561	XP_962268.2
Magnaporthe oryzae (rice blast fungus)	MGG_01689	XP_003714679.1
Oryza sativa (rice)	Os02g0719000	NP_001047942.1
	ARHGDIA	XP_001112147.1
Canis lupus familiaris (dog)	ARHGDIA	XP_849933.1
Danio rerio (zebrafish)	arhgdia	NP_998626.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP012168	XP_320365.2
Xenopus tropicalis (tropical clawed frog)	arhgdia	NP_001004847.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

The Rag-Ragulator Complex Regulates Lysosome Function and Phagocytic Flux in Microglia.
Shen K, Sidik H, Talbot WS
Cell reports14(3)547-559(2016 Jan)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

On the crucial cerebellar wound healing-related pathways and their cross-talks after traumatic brain injury in Danio rerio.
Wu CC, Tsai TH, Chang C, Lee TT, Lin C, Cheng IH, Sun MC, Chuang YJ, Chen BS
PloS one9(6)e97902(2014)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following arhgdia gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the arhgdia cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa35724	NM_213461.1 Latest version!	Danio rerio Rho GDP dissociation inhibitor (GDI) alpha (arhgdia), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

arhgdia ( NM_213461.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_998626.1 Danio rerio Rho GDP dissociation inhibitor (GDI) alpha (arhgdia), mRNA.

Price & Availability↑

CloneID	ODa35724
Clone ID Related Accession (Same CDS sequence)	NM_213461.1
Accession Version	NM_213461.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 612bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	rho GDP-dissociation inhibitor 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC047172.1. ##Evidence-Data-START## Transcript exon combination :: BC047172.1, BC063968.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCCGAGC AGGAGCCCAC ACCAGAGCAG TTAGCCGCTA TCGCAGCCGA GAACGAGCAG 
GGGGAATCTG TGAACTACAA GGCTCCGGCG CAGAAGAGCC TGCAGGAGAT CCAGGAGCTG 
GACCAGGATG ACGAAAGCCT GCGCAAGTAC AAGGAGGCGC TGCTGGGCTC CTGCGCTGTG 
GCTGCAGATC CCAACGCCCC CAATGTTCAG GTGACGCGGC TCACGCTGAT GTGCGAGACG 
GCTCCTGCGC CGCTGGTCCT AGACCTGCAG GGTGATCTGG AGTCCTTTAA GAAGCAGTCG 
TTTATACTGA AAGAAGGAGT GGAGTACAGG ATAAAGATCA GCTTCAAGGT AAACAAAGAG 
ATCGTCTCCG GGTTGAAGTA TGTACAGCAG ACCTTCAGGA AAGGGGTGAG GATTGATAAG 
TCCGACTACA TGGTGGGCAG CTACGGGCCC CGGCCGGACG AGTACGAGTT CCTGACGCCC 
CTAGAGGAGG CACCCAAAGG CATGCTGGCC CGCGGCACCT ACAACCTCAA ATCCAAGTTC 
ACCGACGACG ACAAGCACGA CCACCTGTCC TGGGAGTGGA ACCTGAACAT CAAGAAGGAC 
TGGAAAGATT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_998626.1
CDS	136..747
Translation	MAEQEPTPEQLAAIAAENEQGESVNYKAPAQKSLQEIQELDQDDESLRKYKEALLGSCAVAADPNAPNVQVTRLTLMCETAPAPLVLDLQGDLESFKKQSFILKEGVEYRIKISFKVNKEIVSGLKYVQQTFRKGVRIDKSDYMVGSYGPRPDEYEFLTPLEEAPKGMLARGTYNLKSKFTDDDKHDHLSWEWNLNIKKDWKD

Target ORF information:

RefSeq Version	NM_213461.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio Rho GDP dissociation inhibitor (GDI) alpha (arhgdia), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_213461.1

ORF Insert Sequence:

ATGGCCGAGC AGGAGCCCAC ACCAGAGCAG TTAGCCGCTA TCGCAGCCGA GAACGAGCAG 
GGGGAATCTG TGAACTACAA GGCTCCGGCG CAGAAGAGCC TGCAGGAGAT CCAGGAGCTG 
GACCAGGATG ACGAAAGCCT GCGCAAGTAC AAGGAGGCGC TGCTGGGCTC CTGCGCTGTG 
GCTGCAGATC CCAACGCCCC CAATGTTCAG GTGACGCGGC TCACGCTGAT GTGCGAGACG 
GCTCCTGCGC CGCTGGTCCT AGACCTGCAG GGTGATCTGG AGTCCTTTAA GAAGCAGTCG 
TTTATACTGA AAGAAGGAGT GGAGTACAGG ATAAAGATCA GCTTCAAGGT AAACAAAGAG 
ATCGTCTCCG GGTTGAAGTA TGTACAGCAG ACCTTCAGGA AAGGGGTGAG GATTGATAAG 
TCCGACTACA TGGTGGGCAG CTACGGGCCC CGGCCGGACG AGTACGAGTT CCTGACGCCC 
CTAGAGGAGG CACCCAAAGG CATGCTGGCC CGCGGCACCT ACAACCTCAA ATCCAAGTTC 
ACCGACGACG ACAAGCACGA CCACCTGTCC TGGGAGTGGA ACCTGAACAT CAAGAAGGAC 
TGGAAAGATT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

The Rag-Ragulator Complex Regulates Lysosome Function and Phagocytic Flux in Microglia.
Cell reports14(3)547-559(2016 Jan)
Shen K,Sidik H,Talbot WS

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

On the crucial cerebellar wound healing-related pathways and their cross-talks after traumatic brain injury in Danio rerio.
PloS one9(6)e97902(2014)
Wu CC,Tsai TH,Chang C,Lee TT,Lin C,Cheng IH,Sun MC,Chuang YJ,Chen BS