xpa cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	xpa
Entrez Gene ID	393443
Full Name	xeroderma pigmentosum, complementation group A
Synonyms	zgc:63640
General protein information	Preferred Names xeroderma pigmentosum, complementation group A Names DNA repair protein complementing XP-A cells
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009306424.3	XP_009304699.1	DNA repair protein complementing XP-A cells isoform X2
XM_009306421.2	XP_009304696.1	DNA repair protein complementing XP-A cells isoform X1
XM_005159814.4	XP_005159871.1	DNA repair protein complementing XP-A cells isoform X1
XM_009306424.2	XP_009304699.1	DNA repair protein complementing XP-A cells isoform X2
XM_005159814.3	XP_005159871.1	DNA repair protein complementing XP-A cells isoform X1
NM_200471.1	NP_956765.1	DNA repair protein complementing XP-A cells
XM_009306421.3	XP_009304696.1	DNA repair protein complementing XP-A cells isoform X1

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Xpa	NP_001100126.1
Homo sapiens (human)	XPA	NP_000371.1
	XPA	XP_001114093.1
Drosophila melanogaster (fruit fly)	Xpac	NP_476866.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP007566	XP_308307.3
Pan troglodytes (chimpanzee)	XPA	XP_001156167.2
Canis lupus familiaris (dog)	XPA	XP_538745.2
Mus musculus (house mouse)	Xpa	NP_035858.2
Bos taurus (cattle)	XPA	NP_001033770.1
Gallus gallus (chicken)	XPA	NP_990184.1
Danio rerio (zebrafish)	xpa	NP_956765.1
Caenorhabditis elegans (roundworm)	xpa-1	NP_492025.1
Xenopus tropicalis (tropical clawed frog)	xpa	NP_001016736.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Cadmium sulfate and CdTe-quantum dots alter DNA repair in zebrafish (Danio rerio) liver cells.
Tang S, Cai Q, Chibli H, Allagadda V, Nadeau JL, Mayer GD
Toxicology and applied pharmacology272(2)443-52(2013 Oct)

Impact of environmental estrogens on nucleotide excision repair gene expression in embryonic zebrafish.
Notch EG, Mayer GD
Comparative biochemistry and physiology. Toxicology & pharmacology : CBP157(4)361-5(2013 May)

Zebrafish (Danio rerio) life-cycle exposure to chronic low doses of ethinylestradiol modulates p53 gene transcription within the gonads, but not NER pathways.
Soares J, Castro LF, Reis-Henriques MA, Monteiro NM, Santos MM
Ecotoxicology (London, England)21(5)1513-22(2012 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following xpa gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the xpa cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa04259	NM_200471.1 Latest version!	Danio rerio xeroderma pigmentosum, complementation group A (xpa), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00
ODa05484	XM_009306421.3 Latest version!	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa05484	XM_005159814.4 Latest version!	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa40449	XM_009306424.3 Latest version!	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
View Old Accession Versions >>
ODa40449	XM_009306424.2	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa05484	XM_005159814.3	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa05484	XM_009306421.2	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

xpa ( NM_200471.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956765.1 Danio rerio xeroderma pigmentosum, complementation group A (xpa), mRNA.

Price & Availability↑

CloneID	ODa04259
Clone ID Related Accession (Same CDS sequence)	NM_200471.1
Accession Version	NM_200471.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1650bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	DNA repair protein complementing XP-A cells
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055179.1. ##Evidence-Data-START## Transcript exon combination :: BC055179.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA4476765, SAMEA4476778 [ECO:0000350] ##Evidence-Data-END##

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGGA 
GCTACTCACG CTAAAGTGGC AAAAACTATA GACTCTGGTG CTGGGTTTTT TATTGAAGAG 
GAGACAACAG AGGACGAGCA GCAGGAGAAG AGAGTCGTTC AACAACCAGC CCCAGTGATG 
GAGCCTGATT ATCTGATGTG CGAAGAGTGT CAAAAGCCAT TTATGGATTC TTATCTGAGC 
AACAGTTTTG ATCTGTCTGT GTGTGATAAA TGCAGAGACA ATGAAGTAAA GCACAAGCTA 
ATATCTCGCA CGGAAGCGAA AAAGAATTAC CTCCTGAAGG ACTGTGATCT GGATAAGAGG 
GAGCCACCGC TGCGATTCAT CCTGAGGAAA AATCCTCACA ATCCACGCTG GGGAGACATG 
AAACTCTACT TAAAGACACA GGTTGAGAAA CGCTCTATGG AGGTCTGGGG CAGCGATGAG 
GCTCTGGAAG AGGCCAAGGA GACTAGAGAG GAGAACAAAG AGGTGCAGAA GCAGAAACGC 
TTTAATAAAA AAGTCAAAGA GCTGAGGCGG ACGGTGAGGA GCAGTATGTT TAAGAAAGAC 
ACCAGCATTC ATCAGCACGA CTATGGCCAT GACGAGCTGC TGGATGAAGA GGAAGATTCT 
TTCAGTGAAA AGTGTAACTT CAGAGATCCT ACCTGTGTAA ATACAGCCAA CATTAGCACT 
CAGAAGATGT TTTCTAGTAG AAACTACACC TTAAAAACGC ACAAATCCCC TTTATCCTTG 
AGAATATGTC AGAAAGGTGA AGAAAAGCAA CAGAAAGATC TGCAGCAGCC AGACTCTGAC 
AATTATCTAA CCATCCCCAT TAAAGCTCAT CCTTCAGATT CAAAACCCTC ACATGCATCG 
GGCTGCACCA AGTCTCACCT AAATACCTCC CACCTTCAGC CCGTGCAGCG CTCGCCTGTC 
ATAATGGAGT CTTGGTCCCC TGACAGCCCT ACAGCTATGA TTTATCATCA CGCTGTGCCC 
GTGCCAAATG TACCTGTTGT TCAACCCCAG CTGCTCTGCC TCACGCCCCC TGCAGACGTC 
CCGCATGCTC ACATCCAGCG CAAGCTGCTG CTTGACCCCA CCACGGGTCA GTACTACTTA 
GTGGACACCC CTGTTCCGAT GCAGCCCGCC GCCCAGAGGT TTTACCATCC TGAGAGTGGC 
CAGTACTTGG ACATTCCTTT ATCACTCACT CCAGTGCCAG TGTCGGTGTC ACCGGTCGCC 
CTCGGTCCTG CAGCCTATCC CCCAACTTAC TTGGTCTACC CTTCGACCTT TCTGCCTGCA 
CCCCCGGCGC CGCAGTCACA TTCATCCACC TGCTCCGAGG GCGAGGATGC AGTGGAGACG 
GGCAGCATGT ATATGATCCC GCCGGGCAGC ACAGCACCCA GCAGCACCAC CAAACCGGTC 
ATCAGCATCA CATCGCAGCA AGGTGCCCGT ATCGTTGCTC CTCCCTCCTT TGATGGCACA 
ACAATGAGCT TTGTGGTGGA GCATCGATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956765.1
CDS	86..1735
Translation	MEMPEASHCQHTSPDSANSSNESSMSLTPHMLAKIERNRQRALMLRQARLASRPSSAVEGATHAKVAKTIDSGAGFFIEEETTEDEQQEKRVVQQPAPVMEPDYLMCEECQKPFMDSYLSNSFDLSVCDKCRDNEVKHKLISRTEAKKNYLLKDCDLDKREPPLRFILRKNPHNPRWGDMKLYLKTQVEKRSMEVWGSDEALEEAKETREENKEVQKQKRFNKKVKELRRTVRSSMFKKDTSIHQHDYGHDELLDEEEDSFSEKCNFRDPTCVNTANISTQKMFSSRNYTLKTHKSPLSLRICQKGEEKQQKDLQQPDSDNYLTIPIKAHPSDSKPSHASGCTKSHLNTSHLQPVQRSPVIMESWSPDSPTAMIYHHAVPVPNVPVVQPQLLCLTPPADVPHAHIQRKLLLDPTTGQYYLVDTPVPMQPAAQRFYHPESGQYLDIPLSLTPVPVSVSPVALGPAAYPPTYLVYPSTFLPAPPAPQSHSSTCSEGEDAVETGSMYMIPPGSTAPSSTTKPVISITSQQGARIVAPPSFDGTTMSFVVEHR

Target ORF information:

RefSeq Version	NM_200471.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio xeroderma pigmentosum, complementation group A (xpa), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200471.1

ORF Insert Sequence:

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGGA 
GCTACTCACG CTAAAGTGGC AAAAACTATA GACTCTGGTG CTGGGTTTTT TATTGAAGAG 
GAGACAACAG AGGACGAGCA GCAGGAGAAG AGAGTCGTTC AACAACCAGC CCCAGTGATG 
GAGCCTGATT ATCTGATGTG CGAAGAGTGT CAAAAGCCAT TTATGGATTC TTATCTGAGC 
AACAGTTTTG ATCTGTCTGT GTGTGATAAA TGCAGAGACA ATGAAGTAAA GCACAAGCTA 
ATATCTCGCA CGGAAGCGAA AAAGAATTAC CTCCTGAAGG ACTGTGATCT GGATAAGAGG 
GAGCCACCGC TGCGATTCAT CCTGAGGAAA AATCCTCACA ATCCACGCTG GGGAGACATG 
AAACTCTACT TAAAGACACA GGTTGAGAAA CGCTCTATGG AGGTCTGGGG CAGCGATGAG 
GCTCTGGAAG AGGCCAAGGA GACTAGAGAG GAGAACAAAG AGGTGCAGAA GCAGAAACGC 
TTTAATAAAA AAGTCAAAGA GCTGAGGCGG ACGGTGAGGA GCAGTATGTT TAAGAAAGAC 
ACCAGCATTC ATCAGCACGA CTATGGCCAT GACGAGCTGC TGGATGAAGA GGAAGATTCT 
TTCAGTGAAA AGTGTAACTT CAGAGATCCT ACCTGTGTAA ATACAGCCAA CATTAGCACT 
CAGAAGATGT TTTCTAGTAG AAACTACACC TTAAAAACGC ACAAATCCCC TTTATCCTTG 
AGAATATGTC AGAAAGGTGA AGAAAAGCAA CAGAAAGATC TGCAGCAGCC AGACTCTGAC 
AATTATCTAA CCATCCCCAT TAAAGCTCAT CCTTCAGATT CAAAACCCTC ACATGCATCG 
GGCTGCACCA AGTCTCACCT AAATACCTCC CACCTTCAGC CCGTGCAGCG CTCGCCTGTC 
ATAATGGAGT CTTGGTCCCC TGACAGCCCT ACAGCTATGA TTTATCATCA CGCTGTGCCC 
GTGCCAAATG TACCTGTTGT TCAACCCCAG CTGCTCTGCC TCACGCCCCC TGCAGACGTC 
CCGCATGCTC ACATCCAGCG CAAGCTGCTG CTTGACCCCA CCACGGGTCA GTACTACTTA 
GTGGACACCC CTGTTCCGAT GCAGCCCGCC GCCCAGAGGT TTTACCATCC TGAGAGTGGC 
CAGTACTTGG ACATTCCTTT ATCACTCACT CCAGTGCCAG TGTCGGTGTC ACCGGTCGCC 
CTCGGTCCTG CAGCCTATCC CCCAACTTAC TTGGTCTACC CTTCGACCTT TCTGCCTGCA 
CCCCCGGCGC CGCAGTCACA TTCATCCACC TGCTCCGAGG GCGAGGATGC AGTGGAGACG 
GGCAGCATGT ATATGATCCC GCCGGGCAGC ACAGCACCCA GCAGCACCAC CAAACCGGTC 
ATCAGCATCA CATCGCAGCA AGGTGCCCGT ATCGTTGCTC CTCCCTCCTT TGATGGCACA 
ACAATGAGCT TTGTGGTGGA GCATCGATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

xpa ( XM_009306421.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009304696.1 Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa05484
Clone ID Related Accession (Same CDS sequence)	XM_009306421.2 , XM_005159814.4 , XM_005159814.3 , XM_009306421.3
Accession Version	XM_009306421.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 834bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	DNA repair protein complementing XP-A cells isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009306421.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGGA 
GCTACTCACG CTAAAGTGGC AAAAACTATA GACTCTGGTG CTGGGTTTTT TATTGAAGAG 
GAGACAACAG AGGACGAGCA GCAGGAGAAG AGAGTCGTTC AACAACCAGC CCCAGTGATG 
GAGCCTGATT ATCTGATGTG CGAAGAGTGT CAAAAGCCAT TTATGGATTC TTATCTGAGC 
AACAGTTTTG ATCTGTCTGT GTGTGATAAA TGCAGAGACA ATGAAGTAAA GCACAAGCTA 
ATATCTCGCA CGGAAGCGAA AAAGAATTAC CTCCTGAAGG ACTGTGATCT GGATAAGAGG 
GAGCCACCGC TGCGATTCAT CCTGAGGAAA AATCCTCACA ATCCACGCTG GGGAGACATG 
AAACTCTACT TAAAGACACA GGTGGAGAAA CGCTCTGTGG AGGTCTGGGG CAGTGATGAG 
GCTCTGGAAG AGGCCAAGGA GACTAGAGAG GAGAACAAAG AGGTGCAGAA GCAGAAACGC 
TTTAATAAAA AAGTCAAAGA GCTGAGGCGG ACGGTGAGGA GCAGTATGTT TAAGAAAGAC 
ACCAGCATTC ATCAGCACGA CTACGGCCCT GACGAGCTGC TGGATGAAGA GGAAGATCTC 
TACAGGAAAG TGTGTCAAAC CTGTGGACAC CAACTCACTT TTGAGAAAAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009304696.1
CDS	486..1319
Translation	MEMPEASHCQHTSPDSANSSNESSMSLTPHMLAKIERNRQRALMLRQARLASRPSSAVEGATHAKVAKTIDSGAGFFIEEETTEDEQQEKRVVQQPAPVMEPDYLMCEECQKPFMDSYLSNSFDLSVCDKCRDNEVKHKLISRTEAKKNYLLKDCDLDKREPPLRFILRKNPHNPRWGDMKLYLKTQVEKRSVEVWGSDEALEEAKETREENKEVQKQKRFNKKVKELRRTVRSSMFKKDTSIHQHDYGPDELLDEEEDLYRKVCQTCGHQLTFEKM

Target ORF information:

RefSeq Version	XM_009306421.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009306421.2

ORF Insert Sequence:

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGGA 
GCTACTCACG CTAAAGTGGC AAAAACTATA GACTCTGGTG CTGGGTTTTT TATTGAAGAG 
GAGACAACAG AGGACGAGCA GCAGGAGAAG AGAGTCGTTC AACAACCAGC CCCAGTGATG 
GAGCCTGATT ATCTGATGTG CGAAGAGTGT CAAAAGCCAT TTATGGATTC TTATCTGAGC 
AACAGTTTTG ATCTGTCTGT GTGTGATAAA TGCAGAGACA ATGAAGTAAA GCACAAGCTA 
ATATCTCGCA CGGAAGCGAA AAAGAATTAC CTCCTGAAGG ACTGTGATCT GGATAAGAGG 
GAGCCACCGC TGCGATTCAT CCTGAGGAAA AATCCTCACA ATCCACGCTG GGGAGACATG 
AAACTCTACT TAAAGACACA GGTGGAGAAA CGCTCTGTGG AGGTCTGGGG CAGTGATGAG 
GCTCTGGAAG AGGCCAAGGA GACTAGAGAG GAGAACAAAG AGGTGCAGAA GCAGAAACGC 
TTTAATAAAA AAGTCAAAGA GCTGAGGCGG ACGGTGAGGA GCAGTATGTT TAAGAAAGAC 
ACCAGCATTC ATCAGCACGA CTACGGCCCT GACGAGCTGC TGGATGAAGA GGAAGATCTC 
TACAGGAAAG TGTGTCAAAC CTGTGGACAC CAACTCACTT TTGAGAAAAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

xpa ( XM_005159814.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005159871.1 Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa05484
Clone ID Related Accession (Same CDS sequence)	XM_009306421.2 , XM_005159814.4 , XM_005159814.3 , XM_009306421.3
Accession Version	XM_005159814.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 834bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	DNA repair protein complementing XP-A cells isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005159814.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGGA 
GCTACTCACG CTAAAGTGGC AAAAACTATA GACTCTGGTG CTGGGTTTTT TATTGAAGAG 
GAGACAACAG AGGACGAGCA GCAGGAGAAG AGAGTCGTTC AACAACCAGC CCCAGTGATG 
GAGCCTGATT ATCTGATGTG CGAAGAGTGT CAAAAGCCAT TTATGGATTC TTATCTGAGC 
AACAGTTTTG ATCTGTCTGT GTGTGATAAA TGCAGAGACA ATGAAGTAAA GCACAAGCTA 
ATATCTCGCA CGGAAGCGAA AAAGAATTAC CTCCTGAAGG ACTGTGATCT GGATAAGAGG 
GAGCCACCGC TGCGATTCAT CCTGAGGAAA AATCCTCACA ATCCACGCTG GGGAGACATG 
AAACTCTACT TAAAGACACA GGTGGAGAAA CGCTCTGTGG AGGTCTGGGG CAGTGATGAG 
GCTCTGGAAG AGGCCAAGGA GACTAGAGAG GAGAACAAAG AGGTGCAGAA GCAGAAACGC 
TTTAATAAAA AAGTCAAAGA GCTGAGGCGG ACGGTGAGGA GCAGTATGTT TAAGAAAGAC 
ACCAGCATTC ATCAGCACGA CTACGGCCCT GACGAGCTGC TGGATGAAGA GGAAGATCTC 
TACAGGAAAG TGTGTCAAAC CTGTGGACAC CAACTCACTT TTGAGAAAAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005159871.1
CDS	130..963
Translation	MEMPEASHCQHTSPDSANSSNESSMSLTPHMLAKIERNRQRALMLRQARLASRPSSAVEGATHAKVAKTIDSGAGFFIEEETTEDEQQEKRVVQQPAPVMEPDYLMCEECQKPFMDSYLSNSFDLSVCDKCRDNEVKHKLISRTEAKKNYLLKDCDLDKREPPLRFILRKNPHNPRWGDMKLYLKTQVEKRSVEVWGSDEALEEAKETREENKEVQKQKRFNKKVKELRRTVRSSMFKKDTSIHQHDYGPDELLDEEEDLYRKVCQTCGHQLTFEKM

Target ORF information:

RefSeq Version	XM_005159814.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005159814.4

ORF Insert Sequence:

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGGA 
GCTACTCACG CTAAAGTGGC AAAAACTATA GACTCTGGTG CTGGGTTTTT TATTGAAGAG 
GAGACAACAG AGGACGAGCA GCAGGAGAAG AGAGTCGTTC AACAACCAGC CCCAGTGATG 
GAGCCTGATT ATCTGATGTG CGAAGAGTGT CAAAAGCCAT TTATGGATTC TTATCTGAGC 
AACAGTTTTG ATCTGTCTGT GTGTGATAAA TGCAGAGACA ATGAAGTAAA GCACAAGCTA 
ATATCTCGCA CGGAAGCGAA AAAGAATTAC CTCCTGAAGG ACTGTGATCT GGATAAGAGG 
GAGCCACCGC TGCGATTCAT CCTGAGGAAA AATCCTCACA ATCCACGCTG GGGAGACATG 
AAACTCTACT TAAAGACACA GGTGGAGAAA CGCTCTGTGG AGGTCTGGGG CAGTGATGAG 
GCTCTGGAAG AGGCCAAGGA GACTAGAGAG GAGAACAAAG AGGTGCAGAA GCAGAAACGC 
TTTAATAAAA AAGTCAAAGA GCTGAGGCGG ACGGTGAGGA GCAGTATGTT TAAGAAAGAC 
ACCAGCATTC ATCAGCACGA CTACGGCCCT GACGAGCTGC TGGATGAAGA GGAAGATCTC 
TACAGGAAAG TGTGTCAAAC CTGTGGACAC CAACTCACTT TTGAGAAAAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

xpa ( XM_005159814.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005159871.1 Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa05484
Clone ID Related Accession (Same CDS sequence)	XM_009306421.2 , XM_005159814.4 , XM_005159814.3 , XM_009306421.3
Accession Version	XM_005159814.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 834bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	DNA repair protein complementing XP-A cells isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005159814.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGGA 
GCTACTCACG CTAAAGTGGC AAAAACTATA GACTCTGGTG CTGGGTTTTT TATTGAAGAG 
GAGACAACAG AGGACGAGCA GCAGGAGAAG AGAGTCGTTC AACAACCAGC CCCAGTGATG 
GAGCCTGATT ATCTGATGTG CGAAGAGTGT CAAAAGCCAT TTATGGATTC TTATCTGAGC 
AACAGTTTTG ATCTGTCTGT GTGTGATAAA TGCAGAGACA ATGAAGTAAA GCACAAGCTA 
ATATCTCGCA CGGAAGCGAA AAAGAATTAC CTCCTGAAGG ACTGTGATCT GGATAAGAGG 
GAGCCACCGC TGCGATTCAT CCTGAGGAAA AATCCTCACA ATCCACGCTG GGGAGACATG 
AAACTCTACT TAAAGACACA GGTGGAGAAA CGCTCTGTGG AGGTCTGGGG CAGTGATGAG 
GCTCTGGAAG AGGCCAAGGA GACTAGAGAG GAGAACAAAG AGGTGCAGAA GCAGAAACGC 
TTTAATAAAA AAGTCAAAGA GCTGAGGCGG ACGGTGAGGA GCAGTATGTT TAAGAAAGAC 
ACCAGCATTC ATCAGCACGA CTACGGCCCT GACGAGCTGC TGGATGAAGA GGAAGATCTC 
TACAGGAAAG TGTGTCAAAC CTGTGGACAC CAACTCACTT TTGAGAAAAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005159871.1
CDS	455..1288
Translation	MEMPEASHCQHTSPDSANSSNESSMSLTPHMLAKIERNRQRALMLRQARLASRPSSAVEGATHAKVAKTIDSGAGFFIEEETTEDEQQEKRVVQQPAPVMEPDYLMCEECQKPFMDSYLSNSFDLSVCDKCRDNEVKHKLISRTEAKKNYLLKDCDLDKREPPLRFILRKNPHNPRWGDMKLYLKTQVEKRSVEVWGSDEALEEAKETREENKEVQKQKRFNKKVKELRRTVRSSMFKKDTSIHQHDYGPDELLDEEEDLYRKVCQTCGHQLTFEKM

Target ORF information:

RefSeq Version	XM_005159814.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005159814.3

ORF Insert Sequence:

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGGA 
GCTACTCACG CTAAAGTGGC AAAAACTATA GACTCTGGTG CTGGGTTTTT TATTGAAGAG 
GAGACAACAG AGGACGAGCA GCAGGAGAAG AGAGTCGTTC AACAACCAGC CCCAGTGATG 
GAGCCTGATT ATCTGATGTG CGAAGAGTGT CAAAAGCCAT TTATGGATTC TTATCTGAGC 
AACAGTTTTG ATCTGTCTGT GTGTGATAAA TGCAGAGACA ATGAAGTAAA GCACAAGCTA 
ATATCTCGCA CGGAAGCGAA AAAGAATTAC CTCCTGAAGG ACTGTGATCT GGATAAGAGG 
GAGCCACCGC TGCGATTCAT CCTGAGGAAA AATCCTCACA ATCCACGCTG GGGAGACATG 
AAACTCTACT TAAAGACACA GGTGGAGAAA CGCTCTGTGG AGGTCTGGGG CAGTGATGAG 
GCTCTGGAAG AGGCCAAGGA GACTAGAGAG GAGAACAAAG AGGTGCAGAA GCAGAAACGC 
TTTAATAAAA AAGTCAAAGA GCTGAGGCGG ACGGTGAGGA GCAGTATGTT TAAGAAAGAC 
ACCAGCATTC ATCAGCACGA CTACGGCCCT GACGAGCTGC TGGATGAAGA GGAAGATCTC 
TACAGGAAAG TGTGTCAAAC CTGTGGACAC CAACTCACTT TTGAGAAAAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

xpa ( XM_009306421.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009304696.1 Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa05484
Clone ID Related Accession (Same CDS sequence)	XM_009306421.2 , XM_005159814.4 , XM_005159814.3 , XM_009306421.3
Accession Version	XM_009306421.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 834bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	DNA repair protein complementing XP-A cells isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009306421.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGGA 
GCTACTCACG CTAAAGTGGC AAAAACTATA GACTCTGGTG CTGGGTTTTT TATTGAAGAG 
GAGACAACAG AGGACGAGCA GCAGGAGAAG AGAGTCGTTC AACAACCAGC CCCAGTGATG 
GAGCCTGATT ATCTGATGTG CGAAGAGTGT CAAAAGCCAT TTATGGATTC TTATCTGAGC 
AACAGTTTTG ATCTGTCTGT GTGTGATAAA TGCAGAGACA ATGAAGTAAA GCACAAGCTA 
ATATCTCGCA CGGAAGCGAA AAAGAATTAC CTCCTGAAGG ACTGTGATCT GGATAAGAGG 
GAGCCACCGC TGCGATTCAT CCTGAGGAAA AATCCTCACA ATCCACGCTG GGGAGACATG 
AAACTCTACT TAAAGACACA GGTGGAGAAA CGCTCTGTGG AGGTCTGGGG CAGTGATGAG 
GCTCTGGAAG AGGCCAAGGA GACTAGAGAG GAGAACAAAG AGGTGCAGAA GCAGAAACGC 
TTTAATAAAA AAGTCAAAGA GCTGAGGCGG ACGGTGAGGA GCAGTATGTT TAAGAAAGAC 
ACCAGCATTC ATCAGCACGA CTACGGCCCT GACGAGCTGC TGGATGAAGA GGAAGATCTC 
TACAGGAAAG TGTGTCAAAC CTGTGGACAC CAACTCACTT TTGAGAAAAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009304696.1
CDS	144..977
Translation	MEMPEASHCQHTSPDSANSSNESSMSLTPHMLAKIERNRQRALMLRQARLASRPSSAVEGATHAKVAKTIDSGAGFFIEEETTEDEQQEKRVVQQPAPVMEPDYLMCEECQKPFMDSYLSNSFDLSVCDKCRDNEVKHKLISRTEAKKNYLLKDCDLDKREPPLRFILRKNPHNPRWGDMKLYLKTQVEKRSVEVWGSDEALEEAKETREENKEVQKQKRFNKKVKELRRTVRSSMFKKDTSIHQHDYGPDELLDEEEDLYRKVCQTCGHQLTFEKM

Target ORF information:

RefSeq Version	XM_009306421.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009306421.3

ORF Insert Sequence:

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGGA 
GCTACTCACG CTAAAGTGGC AAAAACTATA GACTCTGGTG CTGGGTTTTT TATTGAAGAG 
GAGACAACAG AGGACGAGCA GCAGGAGAAG AGAGTCGTTC AACAACCAGC CCCAGTGATG 
GAGCCTGATT ATCTGATGTG CGAAGAGTGT CAAAAGCCAT TTATGGATTC TTATCTGAGC 
AACAGTTTTG ATCTGTCTGT GTGTGATAAA TGCAGAGACA ATGAAGTAAA GCACAAGCTA 
ATATCTCGCA CGGAAGCGAA AAAGAATTAC CTCCTGAAGG ACTGTGATCT GGATAAGAGG 
GAGCCACCGC TGCGATTCAT CCTGAGGAAA AATCCTCACA ATCCACGCTG GGGAGACATG 
AAACTCTACT TAAAGACACA GGTGGAGAAA CGCTCTGTGG AGGTCTGGGG CAGTGATGAG 
GCTCTGGAAG AGGCCAAGGA GACTAGAGAG GAGAACAAAG AGGTGCAGAA GCAGAAACGC 
TTTAATAAAA AAGTCAAAGA GCTGAGGCGG ACGGTGAGGA GCAGTATGTT TAAGAAAGAC 
ACCAGCATTC ATCAGCACGA CTACGGCCCT GACGAGCTGC TGGATGAAGA GGAAGATCTC 
TACAGGAAAG TGTGTCAAAC CTGTGGACAC CAACTCACTT TTGAGAAAAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

xpa ( XM_009306424.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009304699.1 Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa40449
Clone ID Related Accession (Same CDS sequence)	XM_009306424.3 , XM_009306424.2
Accession Version	XM_009306424.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	DNA repair protein complementing XP-A cells isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009306424.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGCT 
ACTCACGCTA AAGTGGCAAA AACTATAGAC TCTGGTGCTG GGTTTTTTAT TGAAGAGGAG 
ACAACAGAGG ACGAGCAGCA GGAGAAGAGA GTCGTTCAAC AACCAGCCCC AGTGATGGAG 
CCTGATTATC TGATGTGCGA AGAGTGTCAA AAGCCATTTA TGGATTCTTA TCTGAGCAAC 
AGTTTTGATC TGTCTGTGTG TGATAAATGC AGAGACAATG AAGTAAAGCA CAAGCTAATA 
TCTCGCACGG AAGCGAAAAA GAATTACCTC CTGAAGGACT GTGATCTGGA TAAGAGGGAG 
CCACCGCTGC GATTCATCCT GAGGAAAAAT CCTCACAATC CACGCTGGGG AGACATGAAA 
CTCTACTTAA AGACACAGGT GGAGAAACGC TCTGTGGAGG TCTGGGGCAG TGATGAGGCT 
CTGGAAGAGG CCAAGGAGAC TAGAGAGGAG AACAAAGAGG TGCAGAAGCA GAAACGCTTT 
AATAAAAAAG TCAAAGAGCT GAGGCGGACG GTGAGGAGCA GTATGTTTAA GAAAGACACC 
AGCATTCATC AGCACGACTA CGGCCCTGAC GAGCTGCTGG ATGAAGAGGA AGATCTCTAC 
AGGAAAGTGT GTCAAACCTG TGGACACCAA CTCACTTTTG AGAAAATGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009304699.1
CDS	131..961
Translation	MEMPEASHCQHTSPDSANSSNESSMSLTPHMLAKIERNRQRALMLRQARLASRPSSAVEATHAKVAKTIDSGAGFFIEEETTEDEQQEKRVVQQPAPVMEPDYLMCEECQKPFMDSYLSNSFDLSVCDKCRDNEVKHKLISRTEAKKNYLLKDCDLDKREPPLRFILRKNPHNPRWGDMKLYLKTQVEKRSVEVWGSDEALEEAKETREENKEVQKQKRFNKKVKELRRTVRSSMFKKDTSIHQHDYGPDELLDEEEDLYRKVCQTCGHQLTFEKM

Target ORF information:

RefSeq Version	XM_009306424.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009306424.3

ORF Insert Sequence:

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGCT 
ACTCACGCTA AAGTGGCAAA AACTATAGAC TCTGGTGCTG GGTTTTTTAT TGAAGAGGAG 
ACAACAGAGG ACGAGCAGCA GGAGAAGAGA GTCGTTCAAC AACCAGCCCC AGTGATGGAG 
CCTGATTATC TGATGTGCGA AGAGTGTCAA AAGCCATTTA TGGATTCTTA TCTGAGCAAC 
AGTTTTGATC TGTCTGTGTG TGATAAATGC AGAGACAATG AAGTAAAGCA CAAGCTAATA 
TCTCGCACGG AAGCGAAAAA GAATTACCTC CTGAAGGACT GTGATCTGGA TAAGAGGGAG 
CCACCGCTGC GATTCATCCT GAGGAAAAAT CCTCACAATC CACGCTGGGG AGACATGAAA 
CTCTACTTAA AGACACAGGT GGAGAAACGC TCTGTGGAGG TCTGGGGCAG TGATGAGGCT 
CTGGAAGAGG CCAAGGAGAC TAGAGAGGAG AACAAAGAGG TGCAGAAGCA GAAACGCTTT 
AATAAAAAAG TCAAAGAGCT GAGGCGGACG GTGAGGAGCA GTATGTTTAA GAAAGACACC 
AGCATTCATC AGCACGACTA CGGCCCTGAC GAGCTGCTGG ATGAAGAGGA AGATCTCTAC 
AGGAAAGTGT GTCAAACCTG TGGACACCAA CTCACTTTTG AGAAAATGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

xpa ( XM_009306424.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009304699.1 Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa40449
Clone ID Related Accession (Same CDS sequence)	XM_009306424.3 , XM_009306424.2
Accession Version	XM_009306424.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	DNA repair protein complementing XP-A cells isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009306424.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGCT 
ACTCACGCTA AAGTGGCAAA AACTATAGAC TCTGGTGCTG GGTTTTTTAT TGAAGAGGAG 
ACAACAGAGG ACGAGCAGCA GGAGAAGAGA GTCGTTCAAC AACCAGCCCC AGTGATGGAG 
CCTGATTATC TGATGTGCGA AGAGTGTCAA AAGCCATTTA TGGATTCTTA TCTGAGCAAC 
AGTTTTGATC TGTCTGTGTG TGATAAATGC AGAGACAATG AAGTAAAGCA CAAGCTAATA 
TCTCGCACGG AAGCGAAAAA GAATTACCTC CTGAAGGACT GTGATCTGGA TAAGAGGGAG 
CCACCGCTGC GATTCATCCT GAGGAAAAAT CCTCACAATC CACGCTGGGG AGACATGAAA 
CTCTACTTAA AGACACAGGT GGAGAAACGC TCTGTGGAGG TCTGGGGCAG TGATGAGGCT 
CTGGAAGAGG CCAAGGAGAC TAGAGAGGAG AACAAAGAGG TGCAGAAGCA GAAACGCTTT 
AATAAAAAAG TCAAAGAGCT GAGGCGGACG GTGAGGAGCA GTATGTTTAA GAAAGACACC 
AGCATTCATC AGCACGACTA CGGCCCTGAC GAGCTGCTGG ATGAAGAGGA AGATCTCTAC 
AGGAAAGTGT GTCAAACCTG TGGACACCAA CTCACTTTTG AGAAAATGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009304699.1
CDS	456..1286
Translation	MEMPEASHCQHTSPDSANSSNESSMSLTPHMLAKIERNRQRALMLRQARLASRPSSAVEATHAKVAKTIDSGAGFFIEEETTEDEQQEKRVVQQPAPVMEPDYLMCEECQKPFMDSYLSNSFDLSVCDKCRDNEVKHKLISRTEAKKNYLLKDCDLDKREPPLRFILRKNPHNPRWGDMKLYLKTQVEKRSVEVWGSDEALEEAKETREENKEVQKQKRFNKKVKELRRTVRSSMFKKDTSIHQHDYGPDELLDEEEDLYRKVCQTCGHQLTFEKM

Target ORF information:

RefSeq Version	XM_009306424.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio xeroderma pigmentosum, complementation group A (xpa), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009306424.2

ORF Insert Sequence:

ATGGAGATGC CAGAGGCCAG TCATTGTCAA CACACATCGC CAGACTCTGC AAACTCTTCA 
AATGAGTCCA GCATGTCTTT AACACCACAC ATGCTGGCCA AAATTGAGCG AAACCGCCAA 
CGGGCGCTGA TGCTCAGACA AGCCAGACTC GCCAGCAGAC CGTCCTCCGC TGTAGAAGCT 
ACTCACGCTA AAGTGGCAAA AACTATAGAC TCTGGTGCTG GGTTTTTTAT TGAAGAGGAG 
ACAACAGAGG ACGAGCAGCA GGAGAAGAGA GTCGTTCAAC AACCAGCCCC AGTGATGGAG 
CCTGATTATC TGATGTGCGA AGAGTGTCAA AAGCCATTTA TGGATTCTTA TCTGAGCAAC 
AGTTTTGATC TGTCTGTGTG TGATAAATGC AGAGACAATG AAGTAAAGCA CAAGCTAATA 
TCTCGCACGG AAGCGAAAAA GAATTACCTC CTGAAGGACT GTGATCTGGA TAAGAGGGAG 
CCACCGCTGC GATTCATCCT GAGGAAAAAT CCTCACAATC CACGCTGGGG AGACATGAAA 
CTCTACTTAA AGACACAGGT GGAGAAACGC TCTGTGGAGG TCTGGGGCAG TGATGAGGCT 
CTGGAAGAGG CCAAGGAGAC TAGAGAGGAG AACAAAGAGG TGCAGAAGCA GAAACGCTTT 
AATAAAAAAG TCAAAGAGCT GAGGCGGACG GTGAGGAGCA GTATGTTTAA GAAAGACACC 
AGCATTCATC AGCACGACTA CGGCCCTGAC GAGCTGCTGG ATGAAGAGGA AGATCTCTAC 
AGGAAAGTGT GTCAAACCTG TGGACACCAA CTCACTTTTG AGAAAATGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Cadmium sulfate and CdTe-quantum dots alter DNA repair in zebrafish (Danio rerio) liver cells.
Toxicology and applied pharmacology272(2)443-52(2013 Oct)
Tang S,Cai Q,Chibli H,Allagadda V,Nadeau JL,Mayer GD

Impact of environmental estrogens on nucleotide excision repair gene expression in embryonic zebrafish.
Comparative biochemistry and physiology. Toxicology & pharmacology : CBP157(4)361-5(2013 May)
Notch EG,Mayer GD

Zebrafish (Danio rerio) life-cycle exposure to chronic low doses of ethinylestradiol modulates p53 gene transcription within the gonads, but not NER pathways.
Ecotoxicology (London, England)21(5)1513-22(2012 Jul)
Soares J,Castro LF,Reis-Henriques MA,Monteiro NM,Santos MM

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xpa cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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