chid1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	chid1
Entrez Gene ID	337225
Full Name	chitinase domain containing 1
Synonyms	fb02e07,wu:fb02e07,zgc:66396
General protein information	Preferred Names chitinase domain containing 1 Names chitinase domain-containing protein 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_200057.1	NP_956351.1	chitinase domain-containing protein 1 precursor

Pathways from BioSystems

Homologies

Homo sapiens (human)	CHID1	NP_001136146.1
Pan troglodytes (chimpanzee)	CHID1	XP_001151962.3
Rattus norvegicus (Norway rat)	LOC100911881	XP_006230663.1
Gallus gallus (chicken)	CHID1	NP_001186563.1
Arabidopsis thaliana (thale cress)	AT4G01040	NP_192013.1
Oryza sativa (rice)	Os01g0619800	NP_001043596.1
Canis lupus familiaris (dog)	CHID1	XP_003432503.1
Bos taurus (cattle)	CHID1	NP_001015515.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008124	XP_317335.2
	CHID1	XP_001089724.1
Rattus norvegicus (Norway rat)	Chid1	NP_001041319.2
Danio rerio (zebrafish)	chid1	NP_956351.1
Mus musculus (house mouse)	Chid1	NP_001136153.1
Drosophila melanogaster (fruit fly)	CG8460	NP_609190.2
Xenopus tropicalis (tropical clawed frog)	chid1	NP_001008105.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

New paralogues and revised time line in the expansion of the vertebrate GH18 family.
Hussain M, Wilson JB
Journal of molecular evolution76(4)240-60(2013 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following chid1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the chid1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa37926	NM_200057.1 Latest version!	Danio rerio chitinase domain containing 1 (chid1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

chid1 ( NM_200057.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956351.1 Danio rerio chitinase domain containing 1 (chid1), mRNA.

Price & Availability↑

CloneID	ODa37926
Clone ID Related Accession (Same CDS sequence)	NM_200057.1
Accession Version	NM_200057.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1176bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	chitinase domain-containing protein 1 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054696.1. ##Evidence-Data-START## Transcript exon combination :: BC054696.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGAGAGCAG ATTGGACATT TCTGCTTGTC TGTTTGCTGC TTCCTGTTGT CAGAAGCACA 
TTGTCAAAGA CTGATGCCAA AAAAGCCAGT AAGGTCCAGG AGGCAGAGAG CTCAGTGGCG 
GAACGTCCTG CACAGGATCG GGGTCTGGTG GTGACGGACC CTCAGTGGAG GGACATCGTG 
AGAGAAGAGA AAAGGTTCTG TCATCAGTGC ATCAATACAA GGCAATTTAA AGGCGCAGTG 
CTGGGATACA TCACACCTTG GAATTCTCAT GGATATGACA TCGCTAAGCT GTTTGGCCCC 
AAGCTGACGT CTGTGTCTCC AGTGTGGCTC CAGCTGAGAC GGAGGGGACC AGAGAGCTTC 
CACATTACCG GCCTGCATGA CCACGACCCT GGTTGGGTCA AAGCTGTGAG GAAAGCCAAT 
AAGAAAAACA AAATCCTTCC TCGGCTGCTA TTTGATGGAT GGTCGTATCA GGATTATGTG 
AGTGTTCTGG ACAGCGAGGA CGAGATGGAG GAGTTGGGTC GAGAGGCGCT GGAGGTGGCT 
AAGGCTGAAG GATTTGATGG ATACACACTG GAGTTATGGA GTCAGCTTGG AGGAAACAAA 
AGAAAAGAGC TGGTGCACCT GGTCACTCAC CTGTGTGAGA CTCTGAATGC TGGGAAATTG 
ACCTGTGTGC TGGTCATCCC TCCATCAGTC GCACCGGGCA CTGGTCAGCC GGGCATGTTT 
GGACGGGATG ATTTTGAGAA ACTGGCACCG GTGGTGGACG CCTTCAGTCT GATGACCTAC 
GATTACTCGG GACCCGGCAG GCCAGGTCCA AGCGCTCCGC TGCCGTGGGT CAGAGAGTGT 
GTCCTTCAGC TCGCTCCCGA GAACCAGTGG AGACACAAAA TCCTGCTGGG AGTCAACATG 
TACGGACTGG ACTTCAGCAG CCATGGCGGA GCGGAGCCAC TGCTGGGTGC CAGGTGTATT 
GAGCTGCTGA AGGAAGTGAA ACCCAAACTG CAGTGGGACG AAAATACCGG AGAACATTTC 
TTCAATTATA AAAGGAATAA TGGAGTAAAG CATGTCGTTT ACTACCCCAC TTTAAAGTTT 
CTCCAGCTTC GTATCTCTTT GGCAGCAGAA TTGGGAACGG GAATTTCCAT GTGGGAATTG 
GGTCAAGGAC TGGATTATTT CTACGATCTT TTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956351.1
CDS	30..1205
Translation	MRADWTFLLVCLLLPVVRSTLSKTDAKKASKVQEAESSVAERPAQDRGLVVTDPQWRDIVREEKRFCHQCINTRQFKGAVLGYITPWNSHGYDIAKLFGPKLTSVSPVWLQLRRRGPESFHITGLHDHDPGWVKAVRKANKKNKILPRLLFDGWSYQDYVSVLDSEDEMEELGREALEVAKAEGFDGYTLELWSQLGGNKRKELVHLVTHLCETLNAGKLTCVLVIPPSVAPGTGQPGMFGRDDFEKLAPVVDAFSLMTYDYSGPGRPGPSAPLPWVRECVLQLAPENQWRHKILLGVNMYGLDFSSHGGAEPLLGARCIELLKEVKPKLQWDENTGEHFFNYKRNNGVKHVVYYPTLKFLQLRISLAAELGTGISMWELGQGLDYFYDLL

Target ORF information:

RefSeq Version	NM_200057.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio chitinase domain containing 1 (chid1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200057.1

ORF Insert Sequence:

ATGAGAGCAG ATTGGACATT TCTGCTTGTC TGTTTGCTGC TTCCTGTTGT CAGAAGCACA 
TTGTCAAAGA CTGATGCCAA AAAAGCCAGT AAGGTCCAGG AGGCAGAGAG CTCAGTGGCG 
GAACGTCCTG CACAGGATCG GGGTCTGGTG GTGACGGACC CTCAGTGGAG GGACATCGTG 
AGAGAAGAGA AAAGGTTCTG TCATCAGTGC ATCAATACAA GGCAATTTAA AGGCGCAGTG 
CTGGGATACA TCACACCTTG GAATTCTCAT GGATATGACA TCGCTAAGCT GTTTGGCCCC 
AAGCTGACGT CTGTGTCTCC AGTGTGGCTC CAGCTGAGAC GGAGGGGACC AGAGAGCTTC 
CACATTACCG GCCTGCATGA CCACGACCCT GGTTGGGTCA AAGCTGTGAG GAAAGCCAAT 
AAGAAAAACA AAATCCTTCC TCGGCTGCTA TTTGATGGAT GGTCGTATCA GGATTATGTG 
AGTGTTCTGG ACAGCGAGGA CGAGATGGAG GAGTTGGGTC GAGAGGCGCT GGAGGTGGCT 
AAGGCTGAAG GATTTGATGG ATACACACTG GAGTTATGGA GTCAGCTTGG AGGAAACAAA 
AGAAAAGAGC TGGTGCACCT GGTCACTCAC CTGTGTGAGA CTCTGAATGC TGGGAAATTG 
ACCTGTGTGC TGGTCATCCC TCCATCAGTC GCACCGGGCA CTGGTCAGCC GGGCATGTTT 
GGACGGGATG ATTTTGAGAA ACTGGCACCG GTGGTGGACG CCTTCAGTCT GATGACCTAC 
GATTACTCGG GACCCGGCAG GCCAGGTCCA AGCGCTCCGC TGCCGTGGGT CAGAGAGTGT 
GTCCTTCAGC TCGCTCCCGA GAACCAGTGG AGACACAAAA TCCTGCTGGG AGTCAACATG 
TACGGACTGG ACTTCAGCAG CCATGGCGGA GCGGAGCCAC TGCTGGGTGC CAGGTGTATT 
GAGCTGCTGA AGGAAGTGAA ACCCAAACTG CAGTGGGACG AAAATACCGG AGAACATTTC 
TTCAATTATA AAAGGAATAA TGGAGTAAAG CATGTCGTTT ACTACCCCAC TTTAAAGTTT 
CTCCAGCTTC GTATCTCTTT GGCAGCAGAA TTGGGAACGG GAATTTCCAT GTGGGAATTG 
GGTCAAGGAC TGGATTATTT CTACGATCTT TTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

New paralogues and revised time line in the expansion of the vertebrate GH18 family.
Journal of molecular evolution76(4)240-60(2013 Apr)
Hussain M,Wilson JB