cnn3b cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	cnn3b
Entrez Gene ID	337142
Full Name	calponin 3, acidic b
Synonyms	hm:zehn1486,wu:fa99a06,zgc:112050,zgc:123208
General protein information	Preferred Names calponin 3, acidic b Names calponin 3, acidic b zehn1486
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001024073.1	NP_001019244.1	calponin 3, acidic b

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	CNN3	XP_537063.4
Bos taurus (cattle)	CNN3	NP_001033268.1
Pan troglodytes (chimpanzee)	CNN3	XP_001156968.1
Rattus norvegicus (Norway rat)	Cnn3	NP_062232.1
Danio rerio (zebrafish)	cnn3b	NP_001019244.1
Drosophila melanogaster (fruit fly)	Chd64	NP_647860.1
	CNN3	XP_001103736.1
Gallus gallus (chicken)	CNN3	XP_422326.3
Xenopus tropicalis (tropical clawed frog)	cnn3	NP_989257.1
Homo sapiens (human)	CNN3	NP_001830.1
Mus musculus (house mouse)	Cnn3	NP_082320.1
Danio rerio (zebrafish)	cnn3a	NP_956047.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001313	XP_321834.4

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Evolution of the vertebrate paralemmin gene family: ancient origin of gene duplicates suggests distinct functions.
Hultqvist G, Ocampo Daza D, Larhammar D, Kilimann MW
PloS one7(7)e41850(2012)

Zebrafish miR-1 and miR-133 shape muscle gene expression and regulate sarcomeric actin organization.
Mishima Y, Abreu-Goodger C, Staton AA, Stahlhut C, Shou C, Cheng C, Gerstein M, Enright AJ, Giraldez AJ
Genes & development23(5)619-32(2009 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cnn3b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cnn3b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa30810	NM_001024073.1 Latest version!	Danio rerio calponin 3, acidic b (cnn3b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cnn3b ( NM_001024073.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001019244.1 Danio rerio calponin 3, acidic b (cnn3b), mRNA.

Price & Availability↑

CloneID	ODa30810
Clone ID Related Accession (Same CDS sequence)	NM_001024073.1
Accession Version	NM_001024073.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 996bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	calponin 3, acidic b
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC107981.1. On or before Jul 24, 2006 this sequence version replaced XM_677597.1, XM_704644.1, XM_704643.1. ##Evidence-Data-START## Transcript exon combination :: BC107981.1, EH594616.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGACTCAGT TCAACAAGGG CCCTGCATAT GGTTTATCTG CTGAAGTGAG AAGCAAGATT 
GCCCAGAAGT ATGACGTGCA GAAGGAAGAG GAGCTGAGGT ACTGGATTGA GGATGTAACA 
GGAATGCCAA TTGGAGAAAA CTTCCAGATG GGACTGAAGG ATGGCGTCAT CCTATGCGAA 
CTGATTAATA AACTTCAACC AGGATCTATT AAGAAAATCA ACCATTCCAA GTTGAACTGG 
CACAAGCTTG AGAACCTGGG CAACTTCATC AAAGCTATTC TTGCTTATGG CCTGAAGCCT 
AACGACATTT TTGAGGCCAA TGATCTGTTC GAGAACGGAA ACCTGACTCA AGTCCAGACC 
ACACTTCTTG CGTTGGCCAG CATGGCAAAA ACCAAAGGTA TGAACACAAA AGTCGACATT 
GGTGTAAAGT ATGCAGACAA GCAGACTCGC AGCTTTGATG ATGAGAAAAT GAAGGCTGGT 
CAGTGTGTGA TTGGCCTGCA GATGGGGACG AATAAGTGTG CTAGTCAGGC TGGAATGACC 
GCTTATGGTA CTAGGAGACA TTTGTACGAC CCAAAGACTC AAGCGGACAA ACCATTTGAC 
CAAACCACAA TCAGCCTGCA GATGGGAACT AATAAAGGAG CGAGCCAGGC TGGCATGTCA 
GCACCCGGCA CCAGAAGAGA CATTTTCGAC CAGAAAGTGG CCGTTCAGCC TTTGGACAAC 
TCCACCATCT CTCTTCAGAT GGGCACCAAC AAAGTGGCCT CTCAAAAGGG CATGAGCGTG 
TACGGGCTGG GCAGACAGGT GTATGACCCC AAATACTGCT CCTCACCCAC TGAGCCCACT 
ATCCACAGCA ACGGCAGTCA GGGCACTGGC ACCAACGGCT CCGAGATCAG CGACAGCGAC 
TACCAGGCTG AATACCACGG CGAATATCAG GACGAATACC AGGCAGACTA CCATGATGAA 
TACAGAGGCC AATATGACCA TGGCATTGAC TATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001019244.1
CDS	254..1249
Translation	MTQFNKGPAYGLSAEVRSKIAQKYDVQKEEELRYWIEDVTGMPIGENFQMGLKDGVILCELINKLQPGSIKKINHSKLNWHKLENLGNFIKAILAYGLKPNDIFEANDLFENGNLTQVQTTLLALASMAKTKGMNTKVDIGVKYADKQTRSFDDEKMKAGQCVIGLQMGTNKCASQAGMTAYGTRRHLYDPKTQADKPFDQTTISLQMGTNKGASQAGMSAPGTRRDIFDQKVAVQPLDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCSSPTEPTIHSNGSQGTGTNGSEISDSDYQAEYHGEYQDEYQADYHDEYRGQYDHGIDY

Target ORF information:

RefSeq Version	NM_001024073.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio calponin 3, acidic b (cnn3b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001024073.1

ORF Insert Sequence:

ATGACTCAGT TCAACAAGGG CCCTGCATAT GGTTTATCTG CTGAAGTGAG AAGCAAGATT 
GCCCAGAAGT ATGACGTGCA GAAGGAAGAG GAGCTGAGGT ACTGGATTGA GGATGTAACA 
GGAATGCCAA TTGGAGAAAA CTTCCAGATG GGACTGAAGG ATGGCGTCAT CCTATGCGAA 
CTGATTAATA AACTTCAACC AGGATCTATT AAGAAAATCA ACCATTCCAA GTTGAACTGG 
CACAAGCTTG AGAACCTGGG CAACTTCATC AAAGCTATTC TTGCTTATGG CCTGAAGCCT 
AACGACATTT TTGAGGCCAA TGATCTGTTC GAGAACGGAA ACCTGACTCA AGTCCAGACC 
ACACTTCTTG CGTTGGCCAG CATGGCAAAA ACCAAAGGTA TGAACACAAA AGTCGACATT 
GGTGTAAAGT ATGCAGACAA GCAGACTCGC AGCTTTGATG ATGAGAAAAT GAAGGCTGGT 
CAGTGTGTGA TTGGCCTGCA GATGGGGACG AATAAGTGTG CTAGTCAGGC TGGAATGACC 
GCTTATGGTA CTAGGAGACA TTTGTACGAC CCAAAGACTC AAGCGGACAA ACCATTTGAC 
CAAACCACAA TCAGCCTGCA GATGGGAACT AATAAAGGAG CGAGCCAGGC TGGCATGTCA 
GCACCCGGCA CCAGAAGAGA CATTTTCGAC CAGAAAGTGG CCGTTCAGCC TTTGGACAAC 
TCCACCATCT CTCTTCAGAT GGGCACCAAC AAAGTGGCCT CTCAAAAGGG CATGAGCGTG 
TACGGGCTGG GCAGACAGGT GTATGACCCC AAATACTGCT CCTCACCCAC TGAGCCCACT 
ATCCACAGCA ACGGCAGTCA GGGCACTGGC ACCAACGGCT CCGAGATCAG CGACAGCGAC 
TACCAGGCTG AATACCACGG CGAATATCAG GACGAATACC AGGCAGACTA CCATGATGAA 
TACAGAGGCC AATATGACCA TGGCATTGAC TATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Evolution of the vertebrate paralemmin gene family: ancient origin of gene duplicates suggests distinct functions.
PloS one7(7)e41850(2012)
Hultqvist G,Ocampo Daza D,Larhammar D,Kilimann MW

Zebrafish miR-1 and miR-133 shape muscle gene expression and regulate sarcomeric actin organization.
Genes & development23(5)619-32(2009 Mar)
Mishima Y,Abreu-Goodger C,Staton AA,Stahlhut C,Shou C,Cheng C,Gerstein M,Enright AJ,Giraldez AJ