foxk1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	foxk1
Entrez Gene ID	334470
Full Name	forkhead box K1
Synonyms	wu:fi75f05,zgc:66237
General protein information	Preferred Names forkhead box K1 Names forkhead box protein K1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_199902.1	NP_956196.1	forkhead box protein K1

Pathways from BioSystems

Homologies

Homo sapiens (human)	FOXK1	NP_001032242.1
Canis lupus familiaris (dog)	FOXK1	XP_005621202.1
Mus musculus (house mouse)	Foxk1	NP_951031.2
Bos taurus (cattle)	FOXK1	XP_003587905.2
Pan troglodytes (chimpanzee)	FOXK1	XP_003318328.1
Gallus gallus (chicken)	FOXK1	XP_414784.3
Rattus norvegicus (Norway rat)	Foxk1	NP_001032296.2
Danio rerio (zebrafish)	foxk1	NP_956196.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and mammalian lung.
Zheng W, Wang Z, Collins JE, Andrews RM, Stemple D, Gong Z
PloS one6(8)e24019(2011)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following foxk1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the foxk1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa35168	NM_199902.1 Latest version!	Danio rerio forkhead box K1 (foxk1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

foxk1 ( NM_199902.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956196.1 Danio rerio forkhead box K1 (foxk1), mRNA.

Price & Availability↑

CloneID	ODa35168
Clone ID Related Accession (Same CDS sequence)	NM_199902.1
Accession Version	NM_199902.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1920bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	forkhead box protein K1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054664.1. ##Evidence-Data-START## Transcript exon combination :: BC054664.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGCTGATT TAGGGGATGA TACCGGAGCG AGAGCCTTAC TCGCCCTCAA ATCTGCGCCT 
TGTAGCCCGG TGGCCGTGTC TATCCCGCCC GTGTACACGC TCTCCTCCTC GACTTCGCCC 
GGGATCACAT CATCCATGCC CCTCTCCTCT CCGTCGCAGG CCCTCGCCCG CCTGGAAGGC 
AGGGACTTCG AGTTCGTTAT GCGCCAGCGG ACGGTCACCG TGGGCCGGAA TTCCTCGCAC 
GGCTCCGTGG ATGTCAACAT GGGCCACTCG AGCTTCATTT CCAGGCGACA TCTGCAAATC 
GCCTTCGAGG AGCCGCATTT CTACCTGCGC TGCCTCGGCA AGAACGGTGT GTTCGTCGAC 
GGCGTTTTCC AGAGGAGAGG CGCACCCCCG CTTGCCCTGC CGAGGGAGTG CACATTTCGA 
TTTCCCAGTA CGGTGATCAA GATTCAGTTT ACCTCGCTCT ACCATAAAGA GACACAAAAG 
GAGGAGGCTC CTGTATCCCC TGTGAGACCT CTTTACCCTC AAATCTCTCC GCTAAAAATC 
ACCATTCCCG ACAACGACTT CAAAACTATG ATGAGTCCCC TGCCTTCACC GACAGGAACT 
ATTAGTGTTC CCAATTCCTG CCCAGCAAGT CCTCGAGGGG CAGGTTCCTC GGGTTACCGA 
TACGGCCGCA ACATCACCTC AGATCTCCAG CTGGCAGCGG AATATGCAGC CAAAGCTGTA 
TCAGAACAGC GCACTGAAGC CACGGGAGGA GATAGTCCTA AAGATGAGTC CAAACCCCCA 
TATTCATACG CTCAGCTGAT AGTCCAGGCC ATCTCGTCTG CACAGGACAG ACAGCTAACA 
CTAAGTGGCA TTTACGCTCA CATCACCAAG CATTATCCTT ACTACAGGAC GGCCGACAAG 
GGCTGGCAGA ACTCAATCAG ACACAACCTG TCTTTGAACC GCTACTTTAT TAAAGTGCCG 
CGCTCGCAAG AAGAGCCTGG CAAAGGTTCA TTCTGGCGTG TGGACCCGTC ATCTGAGGCC 
AAGTTGGTGG AGCAGGCCTT TAGAAAGCGC CGTCAGAGAG GAGTGTCCTG TTTCCGCACC 
CCCTTCGGCC CCCTGTCCTC CAGGAGCGCT CCAGCTTCTC CCACTCACTC CGGCCTCCTC 
TCTCCACACT CGAGTGGCCT TCAGACCCCT GAGTGTCTCT CCCGGGAAGG ATCCCCAGTG 
TCTCATGAGC ATGACTTTGG TTCTAAGCTT GCCTCTGTGC CTGAGTACCG ATACTCCCAG 
AGTGCACCAG GCTCTCCAGT GAGCGCTCAG CCAGTAATCA TGGCTGTACC GTCTCAGTCC 
TCAGCCGCGA TATCCAAACC TGTGGCTTAC ATGCCCTCCA TCATCAGCTC CTCCCAGGCC 
TCTGGTCAGG CCATCCATGT GGTGCAGCAG GCGCCAGCTG TCACCATGGT CCGTGTAGTG 
ACCACCTCAA CCAGCTCCCC TAATGGCTAC ATTCTGGCCA ACACCTCCTC CTCAGGCCCT 
GGAGACCTAC ATGGAGATCC AAGAGGTGCA TTAGATGAGA TGCCATTGGT TGGCAGCCGA 
GTGATTCAGG CTGTAGGGAG TCACATAGCC TCAGCCAATA GGGGGCAGCA GAGCTACACT 
GTTGTCCAGC AGAGCGCCAT TCACCATCTC CCCGTGCAGA CCATTGCTCA GAATGGCAAA 
CATGCTCTTC CTGTCACCAG CATACCAACC AGTGCTTATG CTCTGACCAA CCCTCTCCAG 
ATCCTGGCTG CCCAGGCCTC AACATCCCCA CCCGTGCTGG TCAACAGACC CTCCAGCATG 
GAAACTGACG AGTCCAGCAT CGACGAGCCC GAGCCCAAGC GGCCCAAAAA GGAGGAGGAC 
TGTGTGGCTC CGGTCCCTCA GCCTGTTATT GTTGCAATGA ACCAGGAAGC CAGCGAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956196.1
CDS	58..1977
Translation	MADLGDDTGARALLALKSAPCSPVAVSIPPVYTLSSSTSPGITSSMPLSSPSQALARLEGRDFEFVMRQRTVTVGRNSSHGSVDVNMGHSSFISRRHLQIAFEEPHFYLRCLGKNGVFVDGVFQRRGAPPLALPRECTFRFPSTVIKIQFTSLYHKETQKEEAPVSPVRPLYPQISPLKITIPDNDFKTMMSPLPSPTGTISVPNSCPASPRGAGSSGYRYGRNITSDLQLAAEYAAKAVSEQRTEATGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRVDPSSEAKLVEQAFRKRRQRGVSCFRTPFGPLSSRSAPASPTHSGLLSPHSSGLQTPECLSREGSPVSHEHDFGSKLASVPEYRYSQSAPGSPVSAQPVIMAVPSQSSAAISKPVAYMPSIISSSQASGQAIHVVQQAPAVTMVRVVTTSTSSPNGYILANTSSSGPGDLHGDPRGALDEMPLVGSRVIQAVGSHIASANRGQQSYTVVQQSAIHHLPVQTIAQNGKHALPVTSIPTSAYALTNPLQILAAQASTSPPVLVNRPSSMETDESSIDEPEPKRPKKEEDCVAPVPQPVIVAMNQEASE

Target ORF information:

RefSeq Version	NM_199902.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio forkhead box K1 (foxk1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_199902.1

ORF Insert Sequence:

ATGGCTGATT TAGGGGATGA TACCGGAGCG AGAGCCTTAC TCGCCCTCAA ATCTGCGCCT 
TGTAGCCCGG TGGCCGTGTC TATCCCGCCC GTGTACACGC TCTCCTCCTC GACTTCGCCC 
GGGATCACAT CATCCATGCC CCTCTCCTCT CCGTCGCAGG CCCTCGCCCG CCTGGAAGGC 
AGGGACTTCG AGTTCGTTAT GCGCCAGCGG ACGGTCACCG TGGGCCGGAA TTCCTCGCAC 
GGCTCCGTGG ATGTCAACAT GGGCCACTCG AGCTTCATTT CCAGGCGACA TCTGCAAATC 
GCCTTCGAGG AGCCGCATTT CTACCTGCGC TGCCTCGGCA AGAACGGTGT GTTCGTCGAC 
GGCGTTTTCC AGAGGAGAGG CGCACCCCCG CTTGCCCTGC CGAGGGAGTG CACATTTCGA 
TTTCCCAGTA CGGTGATCAA GATTCAGTTT ACCTCGCTCT ACCATAAAGA GACACAAAAG 
GAGGAGGCTC CTGTATCCCC TGTGAGACCT CTTTACCCTC AAATCTCTCC GCTAAAAATC 
ACCATTCCCG ACAACGACTT CAAAACTATG ATGAGTCCCC TGCCTTCACC GACAGGAACT 
ATTAGTGTTC CCAATTCCTG CCCAGCAAGT CCTCGAGGGG CAGGTTCCTC GGGTTACCGA 
TACGGCCGCA ACATCACCTC AGATCTCCAG CTGGCAGCGG AATATGCAGC CAAAGCTGTA 
TCAGAACAGC GCACTGAAGC CACGGGAGGA GATAGTCCTA AAGATGAGTC CAAACCCCCA 
TATTCATACG CTCAGCTGAT AGTCCAGGCC ATCTCGTCTG CACAGGACAG ACAGCTAACA 
CTAAGTGGCA TTTACGCTCA CATCACCAAG CATTATCCTT ACTACAGGAC GGCCGACAAG 
GGCTGGCAGA ACTCAATCAG ACACAACCTG TCTTTGAACC GCTACTTTAT TAAAGTGCCG 
CGCTCGCAAG AAGAGCCTGG CAAAGGTTCA TTCTGGCGTG TGGACCCGTC ATCTGAGGCC 
AAGTTGGTGG AGCAGGCCTT TAGAAAGCGC CGTCAGAGAG GAGTGTCCTG TTTCCGCACC 
CCCTTCGGCC CCCTGTCCTC CAGGAGCGCT CCAGCTTCTC CCACTCACTC CGGCCTCCTC 
TCTCCACACT CGAGTGGCCT TCAGACCCCT GAGTGTCTCT CCCGGGAAGG ATCCCCAGTG 
TCTCATGAGC ATGACTTTGG TTCTAAGCTT GCCTCTGTGC CTGAGTACCG ATACTCCCAG 
AGTGCACCAG GCTCTCCAGT GAGCGCTCAG CCAGTAATCA TGGCTGTACC GTCTCAGTCC 
TCAGCCGCGA TATCCAAACC TGTGGCTTAC ATGCCCTCCA TCATCAGCTC CTCCCAGGCC 
TCTGGTCAGG CCATCCATGT GGTGCAGCAG GCGCCAGCTG TCACCATGGT CCGTGTAGTG 
ACCACCTCAA CCAGCTCCCC TAATGGCTAC ATTCTGGCCA ACACCTCCTC CTCAGGCCCT 
GGAGACCTAC ATGGAGATCC AAGAGGTGCA TTAGATGAGA TGCCATTGGT TGGCAGCCGA 
GTGATTCAGG CTGTAGGGAG TCACATAGCC TCAGCCAATA GGGGGCAGCA GAGCTACACT 
GTTGTCCAGC AGAGCGCCAT TCACCATCTC CCCGTGCAGA CCATTGCTCA GAATGGCAAA 
CATGCTCTTC CTGTCACCAG CATACCAACC AGTGCTTATG CTCTGACCAA CCCTCTCCAG 
ATCCTGGCTG CCCAGGCCTC AACATCCCCA CCCGTGCTGG TCAACAGACC CTCCAGCATG 
GAAACTGACG AGTCCAGCAT CGACGAGCCC GAGCCCAAGC GGCCCAAAAA GGAGGAGGAC 
TGTGTGGCTC CGGTCCCTCA GCCTGTTATT GTTGCAATGA ACCAGGAAGC CAGCGAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and mammalian lung.
PloS one6(8)e24019(2011)
Zheng W,Wang Z,Collins JE,Andrews RM,Stemple D,Gong Z