ccnjl cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	ccnjl
Entrez Gene ID	100001904
Full Name	cyclin J-like
Synonyms	cb541,im:7149181,sb:cb541,si:ch211-59d17.9
General protein information	Preferred Names cyclin J-like Names cyclin-J-like protein
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001309845.1	NP_001296774.1	cyclin-J-like protein

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	CCNJL	XP_001142051.2
Canis lupus familiaris (dog)	CCNJL	XP_546269.2
Gallus gallus (chicken)	CCNJL	XP_414487.4
	CCNJL	XP_001084076.2
Danio rerio (zebrafish)	si:ch211-59d17.9	XP_001337505.4
Bos taurus (cattle)	CCNJL	XP_002689395.1
Mus musculus (house mouse)	Ccnjl	NP_001038995.1
Rattus norvegicus (Norway rat)	Ccnjl	NP_001032862.2

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ccnjl gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ccnjl cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa26043	NM_001309845.1 Latest version!	Danio rerio cyclin J-like (ccnjl), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ccnjl ( NM_001309845.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001296774.1 Danio rerio cyclin J-like (ccnjl), mRNA.

Price & Availability↑

CloneID	ODa26043
Clone ID Related Accession (Same CDS sequence)	NM_001309845.1
Accession Version	NM_001309845.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1224bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	cyclin-J-like protein
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU855895.10. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GFIL01014806.1, GDQQ01026029.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476767, SAMN06645146 [ECO:0000348] ##Evidence-Data-END##

ATGGGAAAGA TGGAATCGGA GGGCCAGTGG TGGAAAACCC AGCTCGCAGC GGACATCCAT 
CAGGCATTGC GAATTAAGGA GCTGAAGTTG CCTACGTACC AAGCCCATTC GCCACAGATT 
GGAATGCGGC GGTACTTTGC TGACCTGCTC GCTGTTCTCA GTAACCGGTA CCAGCTGTGC 
CCTACGGCGC GTCACCTGGC CGTCTACCTG CTGGACCTCT TCATGGATCA CTATGATGTA 
GCCGTGCGGC AACTGTACGT CATCGCCCTC TCCTGCCTCC TGCTGGCCAG TAAGTTTGAG 
GAGAAGGAAG ACCGTGTGCC CAAACTGGAG CAGCTGAACA CGTTAGGCTT CATGTGCAGT 
CTGAACCTCA CGCTCAACAA GCGGGACCTC ATCAAAATGG AGCTGCTGCT GCTGGAGACG 
TTCGGCTGGA ACCTGTGCAT GCCCACACCT GCCCACTTCA TCGACTACTA CCTCCATGCT 
GCTGTCCAGG AGGGAGACCT GCACAACGGC TGGCCCCTCT CCTCGCTGTC CAAGACCAAA 
GCCTTCATGG ACAAGTACAC GCACTACTTC CTCGAGGTTT CCTTGCAAGA TCATGCCTTC 
CTGAGCTTCA GGCCTTCTCA GGTGGCAGCT GCTTGCATTG CTGCGTCCAG AATCTGCCTG 
CAGATCTCCC CCAGCTGGAC CACTGTCCTC CACCTGCTCA CGGGCTACTC CTGGGATCAT 
CTGACGCAGT GCATCCAGCT CATGTTACTT GCTCACGACA ACGACGTAAA AGAAGCCAAC 
AAATCCAAAT CTTCCCCTTC AGCCGGCCAG AGCCTCCAGC CGCAAGCTCA CGTCCCCCCG 
AGCACTGCCG CCCCCTCTCT GCACAGGCAG CCCACCTCCA GCTCCCAGCA GCTGCTCCTC 
CAGGCCAGCA GCTACCCGCA GCTCTCCCAG CACTCGCCGG CATTATCCCA GCTGCACATG 
CTGGCCGACT GCCAGGCCCT GGGACCGGTG GGCTCTCGGG AATATCTGCA GCCCCATCAA 
GCCGGCTTGC TTTCAGCCTC AATGCCGGCT AGCTCGTTTG CATCATTCCC CAGTTTGGCA 
TCAGGGTTGC GAGGCTTGCC TCTCCAGGGT CCTCTCTCTA TGCAAGTTAG CATGGCACCC 
GAGCGCCACT GCCTCGGTTT GACTTACGGG AGCGGTTACT TAAGTTCACA CCACAGCTTC 
ACAGCCAGTT GCTTCGACAG GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001296774.1
CDS	270..1493
Translation	MGKMESEGQWWKTQLAADIHQALRIKELKLPTYQAHSPQIGMRRYFADLLAVLSNRYQLCPTARHLAVYLLDLFMDHYDVAVRQLYVIALSCLLLASKFEEKEDRVPKLEQLNTLGFMCSLNLTLNKRDLIKMELLLLETFGWNLCMPTPAHFIDYYLHAAVQEGDLHNGWPLSSLSKTKAFMDKYTHYFLEVSLQDHAFLSFRPSQVAAACIAASRICLQISPSWTTVLHLLTGYSWDHLTQCIQLMLLAHDNDVKEANKSKSSPSAGQSLQPQAHVPPSTAAPSLHRQPTSSSQQLLLQASSYPQLSQHSPALSQLHMLADCQALGPVGSREYLQPHQAGLLSASMPASSFASFPSLASGLRGLPLQGPLSMQVSMAPERHCLGLTYGSGYLSSHHSFTASCFDR

Target ORF information:

RefSeq Version	NM_001309845.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio cyclin J-like (ccnjl), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001309845.1

ORF Insert Sequence:

ATGGGAAAGA TGGAATCGGA GGGCCAGTGG TGGAAAACCC AGCTCGCAGC GGACATCCAT 
CAGGCATTGC GAATTAAGGA GCTGAAGTTG CCTACGTACC AAGCCCATTC GCCACAGATT 
GGAATGCGGC GGTACTTTGC TGACCTGCTC GCTGTTCTCA GTAACCGGTA CCAGCTGTGC 
CCTACGGCGC GTCACCTGGC CGTCTACCTG CTGGACCTCT TCATGGATCA CTATGATGTA 
GCCGTGCGGC AACTGTACGT CATCGCCCTC TCCTGCCTCC TGCTGGCCAG TAAGTTTGAG 
GAGAAGGAAG ACCGTGTGCC CAAACTGGAG CAGCTGAACA CGTTAGGCTT CATGTGCAGT 
CTGAACCTCA CGCTCAACAA GCGGGACCTC ATCAAAATGG AGCTGCTGCT GCTGGAGACG 
TTCGGCTGGA ACCTGTGCAT GCCCACACCT GCCCACTTCA TCGACTACTA CCTCCATGCT 
GCTGTCCAGG AGGGAGACCT GCACAACGGC TGGCCCCTCT CCTCGCTGTC CAAGACCAAA 
GCCTTCATGG ACAAGTACAC GCACTACTTC CTCGAGGTTT CCTTGCAAGA TCATGCCTTC 
CTGAGCTTCA GGCCTTCTCA GGTGGCAGCT GCTTGCATTG CTGCGTCCAG AATCTGCCTG 
CAGATCTCCC CCAGCTGGAC CACTGTCCTC CACCTGCTCA CGGGCTACTC CTGGGATCAT 
CTGACGCAGT GCATCCAGCT CATGTTACTT GCTCACGACA ACGACGTAAA AGAAGCCAAC 
AAATCCAAAT CTTCCCCTTC AGCCGGCCAG AGCCTCCAGC CGCAAGCTCA CGTCCCCCCG 
AGCACTGCCG CCCCCTCTCT GCACAGGCAG CCCACCTCCA GCTCCCAGCA GCTGCTCCTC 
CAGGCCAGCA GCTACCCGCA GCTCTCCCAG CACTCGCCGG CATTATCCCA GCTGCACATG 
CTGGCCGACT GCCAGGCCCT GGGACCGGTG GGCTCTCGGG AATATCTGCA GCCCCATCAA 
GCCGGCTTGC TTTCAGCCTC AATGCCGGCT AGCTCGTTTG CATCATTCCC CAGTTTGGCA 
TCAGGGTTGC GAGGCTTGCC TCTCCAGGGT CCTCTCTCTA TGCAAGTTAG CATGGCACCC 
GAGCGCCACT GCCTCGGTTT GACTTACGGG AGCGGTTACT TAAGTTCACA CCACAGCTTC 
ACAGCCAGTT GCTTCGACAG GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Briefings in bioinformatics12(5)449-62(2011 Sep)
Gaudet P,Livstone MS,Lewis SE,Thomas PD