LOC105912628 cDNA ORF clone, Clupea harengus(Atlantic herring)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105912628
Entrez Gene ID	105912628
Full Name	collagen alpha-1(II) chain-like
Gene Type	protein-coding
Organism	Clupea harengus(Atlantic herring)

mRNA and Protein(s)

mRNA	Protein	Name
XM_012841613.1	XP_012697067.1	collagen alpha-1(II) chain-like

Pathways from BioSystems
Gene Ontology

The following LOC105912628 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105912628 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCl101365	XM_012841613.1 Latest version!	Clupea harengus collagen alpha-1(II) chain-like (LOC105912628), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105912628 ( XM_012841613.1 ) cDNA ORF clone, Clupea harengus(Atlantic herring) -> XP_012697067.1 Clupea harengus collagen alpha-1(II) chain-like (LOC105912628), mRNA.

Price & Availability↑

CloneID	OCl101365
Clone ID Related Accession (Same CDS sequence)	XM_012841613.1
Accession Version	XM_012841613.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1110bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-06-11
Organism	Clupea harengus(Atlantic herring)
Product	collagen alpha-1(II) chain-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012224219.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Clupea harengus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 49% of CDS bases ##RefSeq-Attributes-END##

ATGACGGTCC AGAAGGTCTT CCAGGCATTC AGGGCCCTCC AGCACTACCA GGCATACAGG 
GATTCCCCGG AGAGCCAGGA GCTCGAGGAG CAGCAGGAGA GCCAGGAGCT CAAGGCGAAA 
TTGGAGAGAG AGGATTGGTT GGTCCTCAAG GATGGGGCGG GTCCATCGGA GCCTCTGGCC 
TACGCGGAGA GAAAGGAGAC GATGGCCCAA AGGCAGATGA GGGGATCCGG GGTACAACTG 
GTCCACTTGG ACCACCAGGA CCAAAAGGAG ATCAGGGTAA TATTGGACCT CCCGGACCAA 
GGGGGGCCCA AGGGCTTTGA TGGTCCTTCA GGACATCCTG GACAGAGGGG CCTTCCAGGA 
CCACCTGGGC CACCAGGCCC TCCTGGCCCA CCCTTAAACT ACACACTAGC CCAGATCAAG 
GACATGATGC TTGTTTCAGA CAAGCCCAAC TACCCCGTCC TCCAGACTCT GCTGGACACG 
CTGCAGAGGG ACCTCAAGTT GCTGCTGGAC CCCCCTGATG GCACCAAGGA GCGTCCAGCC 
ACCACCTGCC TGGAGCTGTG GATCTGCCAT CCTGACTTCA CCAACGGATT CTACTACATT 
GACCCCAACC AGGGCAGCTC AGGGGATGCA CTTCTAGCCT ACTGCAACTT CTCTGACCTG 
GGAGCGGAGA CCTGCTTGCA TCCCAGAGAC CCTCAGCTAC CCAATAAAGC CTGGCTGCAA 
GAGGCTGAGC CAGACTCTTT CCAGTGGCTG AGTTCTCTAT CCAGAGGCTT TCAGATTGAG 
TACCCCGCTG CCAGTGTGGT CCAGATGCGT TTCCTGCGAC TGCACAGCCG CCGGGTGGAG 
CAGAGGGTGA CCTTCTCCTG CCCACCTGGG CACAGGCTAG GCCAGACTCG TCGGGAGGCC 
AAGTTCATGA CAGACGTGTC CAAACAGAGC TACCTAGCAA CTATACAAGA CTGTGTGCCT 
GCTATGGAAG TGGACTCTTC CCCACGCGAG TCTGTGCTGC AGTTTGAGGA CCTGGACCTC 
CTTCCTCTCC GAGACGTGGC TGTGTCCTCA CACAGTGGGG ACCTCACGCA GCAGTTTGGC 
TTCACCATCG GCCCTGTGTG CTTCAGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012697067.1
CDS	1..1110
Translation	MTVQKVFQAFRALQHYQAYRDSPESQELEEQQESQELKAKLEREDWLVLKDGAGPSEPLAYAERKETMAQRQMRGSGVQLVHLDHQDQKEIRVILDLPDQGGPKGFDGPSGHPGQRGLPGPPGPPGPPGPPLNYTLAQIKDMMLVSDKPNYPVLQTLLDTLQRDLKLLLDPPDGTKERPATTCLELWICHPDFTNGFYYIDPNQGSSGDALLAYCNFSDLGAETCLHPRDPQLPNKAWLQEAEPDSFQWLSSLSRGFQIEYPAASVVQMRFLRLHSRRVEQRVTFSCPPGHRLGQTRREAKFMTDVSKQSYLATIQDCVPAMEVDSSPRESVLQFEDLDLLPLRDVAVSSHSGDLTQQFGFTIGPVCFS

Target ORF information:

RefSeq Version	XM_012841613.1
Organism	Clupea harengus(Atlantic herring)
Definition	Clupea harengus collagen alpha-1(II) chain-like (LOC105912628), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012841613.1

ORF Insert Sequence:

ATGACGGTCC AGAAGGTCTT CCAGGCATTC AGGGCCCTCC AGCACTACCA GGCATACAGG 
GATTCCCCGG AGAGCCAGGA GCTCGAGGAG CAGCAGGAGA GCCAGGAGCT CAAGGCGAAA 
TTGGAGAGAG AGGATTGGTT GGTCCTCAAG GATGGGGCGG GTCCATCGGA GCCTCTGGCC 
TACGCGGAGA GAAAGGAGAC GATGGCCCAA AGGCAGATGA GGGGATCCGG GGTACAACTG 
GTCCACTTGG ACCACCAGGA CCAAAAGGAG ATCAGGGTAA TATTGGACCT CCCGGACCAA 
GGGGGGCCCA AGGGCTTTGA TGGTCCTTCA GGACATCCTG GACAGAGGGG CCTTCCAGGA 
CCACCTGGGC CACCAGGCCC TCCTGGCCCA CCCTTAAACT ACACACTAGC CCAGATCAAG 
GACATGATGC TTGTTTCAGA CAAGCCCAAC TACCCCGTCC TCCAGACTCT GCTGGACACG 
CTGCAGAGGG ACCTCAAGTT GCTGCTGGAC CCCCCTGATG GCACCAAGGA GCGTCCAGCC 
ACCACCTGCC TGGAGCTGTG GATCTGCCAT CCTGACTTCA CCAACGGATT CTACTACATT 
GACCCCAACC AGGGCAGCTC AGGGGATGCA CTTCTAGCCT ACTGCAACTT CTCTGACCTG 
GGAGCGGAGA CCTGCTTGCA TCCCAGAGAC CCTCAGCTAC CCAATAAAGC CTGGCTGCAA 
GAGGCTGAGC CAGACTCTTT CCAGTGGCTG AGTTCTCTAT CCAGAGGCTT TCAGATTGAG 
TACCCCGCTG CCAGTGTGGT CCAGATGCGT TTCCTGCGAC TGCACAGCCG CCGGGTGGAG 
CAGAGGGTGA CCTTCTCCTG CCCACCTGGG CACAGGCTAG GCCAGACTCG TCGGGAGGCC 
AAGTTCATGA CAGACGTGTC CAAACAGAGC TACCTAGCAA CTATACAAGA CTGTGTGCCT 
GCTATGGAAG TGGACTCTTC CCCACGCGAG TCTGTGCTGC AGTTTGAGGA CCTGGACCTC 
CTTCCTCTCC GAGACGTGGC TGTGTCCTCA CACAGTGGGG ACCTCACGCA GCAGTTTGGC 
TTCACCATCG GCCCTGTGTG CTTCAGCTAG