nkx1-1 cDNA ORF clone, Clupea harengus(Atlantic herring)

Gene
Clones
gRNAs

Summary

Gene Symbol	nkx1-1
Entrez Gene ID	105896773
Full Name	NK1 homeobox 1
Gene Type	protein-coding
Organism	Clupea harengus(Atlantic herring)

mRNA and Protein(s)

mRNA	Protein	Name
XM_012823575.1	XP_012679029.1	NK1 transcription factor-related protein 1
XM_012823575.2	XP_012679029.2	NK1 transcription factor-related protein 1

Pathways from BioSystems
Gene Ontology

The following nkx1-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the nkx1-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCl153601	XM_012823575.2 Latest version!	Clupea harengus NK1 homeobox 1 (nkx1-1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
OCl86408	XM_012823575.1 Latest version!	Clupea harengus NK1 homeobox 1 (nkx1-1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

nkx1-1 ( XM_012823575.2 ) cDNA ORF clone, Clupea harengus(Atlantic herring) -> XP_012679029.2 Clupea harengus NK1 homeobox 1 (nkx1-1), mRNA.

Price & Availability↑

CloneID	OCl153601
Clone ID Related Accession (Same CDS sequence)	XM_012823575.2
Accession Version	XM_012823575.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1263bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-11-17
Organism	Clupea harengus(Atlantic herring)
Product	NK1 transcription factor-related protein 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_045171.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Nov 18, 2019 this sequence version replaced XM_012823575.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Clupea harengus Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTATTCAA GTAGCCTAAA ACACACACAC GCGAGTAGGG TATCGTTGCT GTGCACGGCG 
CAGGACAGTG GGGAAGCGGG TTTGTTTTTT TCTTCACTAG AAATTATGAA CAGAGACAAG 
ACGACTCCGG TTGGAGATAC AGCGATCGCT CCACTCGCGT CCGGCGGCGC CTTGGTCACA 
CAGGCAGCGG TTATCGTGTC GGTTTCTCCG GCGAGCATGG ACAACAACAA CAACAGCCCG 
AAGCGAGTCT CTGCAAACGA TCTCGACAGA GAGGTGCTGC TACACCACGG CGGGACAGGA 
GACGGTTCAC TGCTGCGACA GGATCCCGCC GCTCCAGCCG TAGCGCCGAC AACGGGCCAC 
CGGACCACTG CGTTTTCAGT TCTGGACATT TTGGACCCGA ACAAGTTCAC AAGTAAAAAA 
CAACCAAGAA CAGCCATCGA CTTCACTTTA GGGACGGAGA ACCGAGGCGA CGAGGACTCG 
TCCCGTGGAT CCGACCAGAA AACATCATAC ACGGCAGACT ATGATACTTG TAAAAAATCA 
TCATTATCAA AAGATGGCTA CGTGTACAGA TCCGAAGAGT GTGAACACGA CTTCATCCAG 
GCGAACCACA CGGACAGTGA GATCCAGGAC GAGCTGTGTA GCGACGAGAG CAACAGCGCG 
CACATGGGCA ACGCGGACGG AGGATTAGAT TCCCATGACA ACGCGAGAGA ACAAACTCCA 
AGTCCTGCTG GCGCACAAAC TCAGCAGTCG TCTTCAAACG GTCAGAACAA CCAGGTAAAA 
GCGAAGAGAA AGCGCTCCGG CTCGGACTCC AAGTCGGGCA AGCCCCGGAG GGCTCGTACG 
GCATTTACCT ACGAACAACT TGTTGCTCTC GAGAACAAAT TCAAGTCTAC CAGGTACCTC 
TCCGTCTGTG AACGGCTCAA TTTGGCGTTG TCGCTCAGCT TGACAGAGAC GCAGGTGAAA 
ATCTGGTTTC AGAACCGGCG TACCAAGTGG AAAAAACAGA ATCCCGGGGC AGATACGAGT 
GCACCAACGG GCGGTGGCGG TGGCACGAAC GGCCAAGGCC ACGGACTGGG GGGGCTAAGC 
CCCCTGAGTC CTTCCCCCCC CATGGGCGGC CATCTGTCCA TGCACAGCTA CCCAGGGCAT 
GCGCCAGGGG GACTCGTCTG TACCGCTCAA TTACCGTTTC TGCAGAGTCA CGCGGTACTC 
TCACCTTTCA TGTTGAGTTC GCAAGCATAC GGAGCTCCCA CGTTTTACAC TTCGCACTTG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012679029.2
CDS	143..1405
Translation	MYSSSLKHTHASRVSLLCTAQDSGEAGLFFSSLEIMNRDKTTPVGDTAIAPLASGGALVTQAAVIVSVSPASMDNNNNSPKRVSANDLDREVLLHHGGTGDGSLLRQDPAAPAVAPTTGHRTTAFSVLDILDPNKFTSKKQPRTAIDFTLGTENRGDEDSSRGSDQKTSYTADYDTCKKSSLSKDGYVYRSEECEHDFIQANHTDSEIQDELCSDESNSAHMGNADGGLDSHDNAREQTPSPAGAQTQQSSSNGQNNQVKAKRKRSGSDSKSGKPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGTNGQGHGLGGLSPLSPSPPMGGHLSMHSYPGHAPGGLVCTAQLPFLQSHAVLSPFMLSSQAYGAPTFYTSHL

Target ORF information:

RefSeq Version	XM_012823575.2
Organism	Clupea harengus(Atlantic herring)
Definition	Clupea harengus NK1 homeobox 1 (nkx1-1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012823575.2

ORF Insert Sequence:

ATGTATTCAA GTAGCCTAAA ACACACACAC GCGAGTAGGG TATCGTTGCT GTGCACGGCG 
CAGGACAGTG GGGAAGCGGG TTTGTTTTTT TCTTCACTAG AAATTATGAA CAGAGACAAG 
ACGACTCCGG TTGGAGATAC AGCGATCGCT CCACTCGCGT CCGGCGGCGC CTTGGTCACA 
CAGGCAGCGG TTATCGTGTC GGTTTCTCCG GCGAGCATGG ACAACAACAA CAACAGCCCG 
AAGCGAGTCT CTGCAAACGA TCTCGACAGA GAGGTGCTGC TACACCACGG CGGGACAGGA 
GACGGTTCAC TGCTGCGACA GGATCCCGCC GCTCCAGCCG TAGCGCCGAC AACGGGCCAC 
CGGACCACTG CGTTTTCAGT TCTGGACATT TTGGACCCGA ACAAGTTCAC AAGTAAAAAA 
CAACCAAGAA CAGCCATCGA CTTCACTTTA GGGACGGAGA ACCGAGGCGA CGAGGACTCG 
TCCCGTGGAT CCGACCAGAA AACATCATAC ACGGCAGACT ATGATACTTG TAAAAAATCA 
TCATTATCAA AAGATGGCTA CGTGTACAGA TCCGAAGAGT GTGAACACGA CTTCATCCAG 
GCGAACCACA CGGACAGTGA GATCCAGGAC GAGCTGTGTA GCGACGAGAG CAACAGCGCG 
CACATGGGCA ACGCGGACGG AGGATTAGAT TCCCATGACA ACGCGAGAGA ACAAACTCCA 
AGTCCTGCTG GCGCACAAAC TCAGCAGTCG TCTTCAAACG GTCAGAACAA CCAGGTAAAA 
GCGAAGAGAA AGCGCTCCGG CTCGGACTCC AAGTCGGGCA AGCCCCGGAG GGCTCGTACG 
GCATTTACCT ACGAACAACT TGTTGCTCTC GAGAACAAAT TCAAGTCTAC CAGGTACCTC 
TCCGTCTGTG AACGGCTCAA TTTGGCGTTG TCGCTCAGCT TGACAGAGAC GCAGGTGAAA 
ATCTGGTTTC AGAACCGGCG TACCAAGTGG AAAAAACAGA ATCCCGGGGC AGATACGAGT 
GCACCAACGG GCGGTGGCGG TGGCACGAAC GGCCAAGGCC ACGGACTGGG GGGGCTAAGC 
CCCCTGAGTC CTTCCCCCCC CATGGGCGGC CATCTGTCCA TGCACAGCTA CCCAGGGCAT 
GCGCCAGGGG GACTCGTCTG TACCGCTCAA TTACCGTTTC TGCAGAGTCA CGCGGTACTC 
TCACCTTTCA TGTTGAGTTC GCAAGCATAC GGAGCTCCCA CGTTTTACAC TTCGCACTTG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

nkx1-1 ( XM_012823575.1 ) cDNA ORF clone, Clupea harengus(Atlantic herring) -> XP_012679029.1 Clupea harengus NK1 homeobox 1 (nkx1-1), mRNA.

Price & Availability↑

CloneID	OCl86408
Clone ID Related Accession (Same CDS sequence)	XM_012823575.1
Accession Version	XM_012823575.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-06-11
Organism	Clupea harengus(Atlantic herring)
Product	NK1 transcription factor-related protein 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012220585.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Clupea harengus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 21% of CDS bases ##RefSeq-Attributes-END##

ATGAACAGAG ACAAGACGAC TCCGGTTGGA GATACAGCGA TCGCTCCACT CGCGTCCGGC 
GGCGCCTTGG TCACACAGGC AGCGGTTATC GTGTCGGTTT CTCCGGCGAG CATGGACAAC 
AACAACAACA ACAGCCCGAA GCGAGTCTCT GCAAACGATC TCGACAGAGA GGTGCTGCTA 
CACCACGGCG GGACAGGAGA CGGTTCACTG CTGCGACAGG ATCCCGCCGC TCCAGCCGTA 
GCGCCGACAA CGGGCCACCG GACCACTGCG TTTTCAGTTC TGGACATTTT GGACCCGAAC 
AAGTTCACAA GTAAAAAACA ACCAAGAACA GCCATCGACT TCACTTTAGG GACGGAGAAC 
CGAGGCGACG AGGACTCGTC CCGTGGATCC GACCAGAAAA CATCATACAC GGCAGACTAT 
GATACTTGTA AAAAATCATC ATTATCAAAA GATGGCTACG TGTACAGATC CGAAGAGTGT 
GAACACGACT TCATCCAGGC GAACCACACG GACAGTGAGA TCCAGGACGA GCTGTGTAGC 
GACGAGAGCA ACAGCGCGCA CATGGGCAAC GCGGACGGAG GATTAGATTC CCATGACAAC 
GCGAGAGAAC AAACTCCAAG TCCTGCTGGC GCACAAACTC AGCAGTCGTC TTCAAACGGT 
CAGAACAACC AGGTAAAAGC GAAGAGAAAG CGCTCCGGCT CGGACTCCAA GTCGGGCAAG 
CCCCGGAGGG CTCGTACGGC ATTTACCTAC GAACAACTTG TTGCTCTCGA GAACAAATTC 
AAGTCTACCA GGTACCTCTC CGTCTGTGAA CGGCTCAATT TGGCGTTGTC GCTCAGCTTG 
ACAGAGACGC AGGTGAAAAT CTGGTTTCAG AACCGGCGTA CCAAGTGGAA AAAACAGAAT 
CCCGGGGCAG ATACGAGTGC ACCAACGGGC GGTGGCGGTG GCACGAACGG CCAAGGCCAC 
GGACTGGGGG GGCTCAGCCC CCTGAGTCCT TCCCCTCCCA TGGGCGGCCA TCTGTCCATG 
CACAGCTACC CAGGGCATGC GCCAGGGGGA CTCGTCTGTA CCGCTCAATT ACCGTTTCTG 
CAGAGTCACG CGGTACTCTC ACCTTTCATG TTGAGTTCGC AAGCATACGG AGCTCCCACG 
TTTTACACTT CGCACTTGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012679029.1
CDS	1..1161
Translation	MNRDKTTPVGDTAIAPLASGGALVTQAAVIVSVSPASMDNNNNNSPKRVSANDLDREVLLHHGGTGDGSLLRQDPAAPAVAPTTGHRTTAFSVLDILDPNKFTSKKQPRTAIDFTLGTENRGDEDSSRGSDQKTSYTADYDTCKKSSLSKDGYVYRSEECEHDFIQANHTDSEIQDELCSDESNSAHMGNADGGLDSHDNAREQTPSPAGAQTQQSSSNGQNNQVKAKRKRSGSDSKSGKPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGTNGQGHGLGGLSPLSPSPPMGGHLSMHSYPGHAPGGLVCTAQLPFLQSHAVLSPFMLSSQAYGAPTFYTSHL

Target ORF information:

RefSeq Version	XM_012823575.1
Organism	Clupea harengus(Atlantic herring)
Definition	Clupea harengus NK1 homeobox 1 (nkx1-1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012823575.1

ORF Insert Sequence:

ATGAACAGAG ACAAGACGAC TCCGGTTGGA GATACAGCGA TCGCTCCACT CGCGTCCGGC 
GGCGCCTTGG TCACACAGGC AGCGGTTATC GTGTCGGTTT CTCCGGCGAG CATGGACAAC 
AACAACAACA ACAGCCCGAA GCGAGTCTCT GCAAACGATC TCGACAGAGA GGTGCTGCTA 
CACCACGGCG GGACAGGAGA CGGTTCACTG CTGCGACAGG ATCCCGCCGC TCCAGCCGTA 
GCGCCGACAA CGGGCCACCG GACCACTGCG TTTTCAGTTC TGGACATTTT GGACCCGAAC 
AAGTTCACAA GTAAAAAACA ACCAAGAACA GCCATCGACT TCACTTTAGG GACGGAGAAC 
CGAGGCGACG AGGACTCGTC CCGTGGATCC GACCAGAAAA CATCATACAC GGCAGACTAT 
GATACTTGTA AAAAATCATC ATTATCAAAA GATGGCTACG TGTACAGATC CGAAGAGTGT 
GAACACGACT TCATCCAGGC GAACCACACG GACAGTGAGA TCCAGGACGA GCTGTGTAGC 
GACGAGAGCA ACAGCGCGCA CATGGGCAAC GCGGACGGAG GATTAGATTC CCATGACAAC 
GCGAGAGAAC AAACTCCAAG TCCTGCTGGC GCACAAACTC AGCAGTCGTC TTCAAACGGT 
CAGAACAACC AGGTAAAAGC GAAGAGAAAG CGCTCCGGCT CGGACTCCAA GTCGGGCAAG 
CCCCGGAGGG CTCGTACGGC ATTTACCTAC GAACAACTTG TTGCTCTCGA GAACAAATTC 
AAGTCTACCA GGTACCTCTC CGTCTGTGAA CGGCTCAATT TGGCGTTGTC GCTCAGCTTG 
ACAGAGACGC AGGTGAAAAT CTGGTTTCAG AACCGGCGTA CCAAGTGGAA AAAACAGAAT 
CCCGGGGCAG ATACGAGTGC ACCAACGGGC GGTGGCGGTG GCACGAACGG CCAAGGCCAC 
GGACTGGGGG GGCTCAGCCC CCTGAGTCCT TCCCCTCCCA TGGGCGGCCA TCTGTCCATG 
CACAGCTACC CAGGGCATGC GCCAGGGGGA CTCGTCTGTA CCGCTCAATT ACCGTTTCTG 
CAGAGTCACG CGGTACTCTC ACCTTTCATG TTGAGTTCGC AAGCATACGG AGCTCCCACG 
TTTTACACTT CGCACTTGTG A