| Gene Symbol | STRN |
| Entrez Gene ID | 537010 |
| Full Name | striatin |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » STRN cDNA ORF clone
| Gene Symbol | STRN |
| Entrez Gene ID | 537010 |
| Full Name | striatin |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Bos taurus(cattle) |
| mRNA | Protein | Name |
|---|---|---|
| XM_010809956.2 | XP_010808258.1 | striatin isoform X3 |
| NM_001206104.1 | NP_001193033.1 | striatin |
| NM_001206104.2 | NP_001193033.1 | striatin |
| XM_005212644.3 | XP_005212701.1 | striatin isoform X1 |
| XM_005212644.4 | XP_005212701.1 | striatin isoform X1 |
| XM_005212646.3 | XP_005212703.1 | striatin isoform X4 |
| XM_015473442.1 | XP_015328928.1 | striatin isoform X2 |
| XM_015473442.2 | XP_015328928.1 | striatin isoform X2 |
| Canis lupus familiaris (dog) | STRN | XP_005630392.1 |
| Rattus norvegicus (Norway rat) | Strn | NP_062021.1 |
| Xenopus tropicalis (tropical clawed frog) | strn | NP_001135657.1 |
| Pan troglodytes (chimpanzee) | STRN | XP_525732.2 |
| STRN | XP_001107812.2 | |
| Mus musculus (house mouse) | Strn | NP_035630.2 |
| Homo sapiens (human) | STRN | NP_003153.2 |
| Gallus gallus (chicken) | STRN | XP_004935476.1 |
| Danio rerio (zebrafish) | zgc:158357 | NP_001074111.1 |
| Bos taurus (cattle) | STRN | NP_001193033.1 |
Striatins as plaque molecules of zonulae adhaerentes in simple epithelia, of tessellate junctions in stratified epithelia, of cardiac composite junctions and of various size classes of lateral adherens junctions in cultures of epithelia- and carcinoma-derived cells.
Franke WW, Rickelt S, Zimbelmann R, D?rflinger Y, Kuhn C, Frey N, Heid H, Rosin-Arbesfeld R
Cell and tissue research359(3)779-97(2015 Mar)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
the "multimodulator" scaffold roles of striatins in the initiation and regulation of the formation of various complex particles and structures, are discussed.
Title: Striatins as plaque molecules of zonulae adhaerentes in simple epithelia, of tessellate junctions in stratified epithelia, of cardiac composite junctions and of various size classes of lateral adherens junctions in cultures of epithelia- and carcinoma-derived cells.
The following STRN gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the STRN cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OBa23945 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005212646.3 | |
| Accession Version | XM_005212646.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2121bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-01-25 | |
| Organism | Bos taurus(cattle) | |
| Product | striatin isoform X4 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104293.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005212646.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCTGGAAT ATGCTCTTAA ACAGGAAAGA GCCAAATACC ACAAGTTGAA ATATGGGACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005212703.1 |
| CDS | 99..2219 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005212646.3 |
1 | ATGCTGGAAT ATGCTCTTAA ACAGGAAAGA GCCAAATACC ACAAGTTGAA ATATGGGACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa239119 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001206104.2 | |
| Accession Version | NM_001206104.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2343bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-05-29 | |
| Organism | Bos taurus(cattle) | |
| Product | striatin | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000011.1. On May 30, 2018 this sequence version replaced NM_001206104.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR6764281.30397.1, SRR5571263.10277.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGGACGAGC AAGCGGGTCC CGGTGTCTTC TTCAGCAACA ACCACCCGGC CGCCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001193033.1 |
| CDS | 1..2343 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001206104.2 |
1 | ATGGACGAGC AAGCGGGTCC CGGTGTCTTC TTCAGCAACA ACCACCCGGC CGCCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa220478 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005212644.4 | |
| Accession Version | XM_005212644.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2430bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-05-06 | |
| Organism | Bos taurus(cattle) | |
| Product | striatin isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037338.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005212644.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGACGAGC AAGCGGGTCC CGGTGTCTTC TTCAGCAACA ACCACCCGGC CGCCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005212701.1 |
| CDS | 135..2564 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005212644.4 |
1 | ATGGACGAGC AAGCGGGTCC CGGTGTCTTC TTCAGCAACA ACCACCCGGC CGCCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa220479 | |
| Clone ID Related Accession (Same CDS sequence) | XM_015473442.2 | |
| Accession Version | XM_015473442.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2238bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-05-06 | |
| Organism | Bos taurus(cattle) | |
| Product | striatin isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037338.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_015473442.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAAATACA TTTCAAACAA GCTCTGTCAC TTAAATCTCC AGGCTCAGAT TGCCTTTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_015328928.1 |
| CDS | 16..2253 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_015473442.2 |
1 | ATGAAATACA TTTCAAACAA GCTCTGTCAC TTAAATCTCC AGGCTCAGAT TGCCTTTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa91865 | |
| Clone ID Related Accession (Same CDS sequence) | XM_015473442.1 | |
| Accession Version | XM_015473442.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2238bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-01-25 | |
| Organism | Bos taurus(cattle) | |
| Product | striatin isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104293.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAAATACA TTTCAAACAA GCTCTGTCAC TTAAATCTCC AGGCTCAGAT TGCCTTTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_015328928.1 |
| CDS | 68..2305 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_015473442.1 |
1 | ATGAAATACA TTTCAAACAA GCTCTGTCAC TTAAATCTCC AGGCTCAGAT TGCCTTTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa36527 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001206104.1 | |
| Accession Version | NM_001206104.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2343bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-10-22 | |
| Organism | Bos taurus(cattle) | |
| Product | striatin | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DAAA02030560.1 and DAAA02030559.1. On Apr 20, 2011 this sequence version replaced XM_617163.5. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN02822095, SAMN04019650 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGACGAGC AAGCGGGTCC CGGTGTCTTC TTCAGCAACA ACCACCCGGC CGCCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001193033.1 |
| CDS | 1..2343 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001206104.1 |
1 | ATGGACGAGC AAGCGGGTCC CGGTGTCTTC TTCAGCAACA ACCACCCGGC CGCCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa23943 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005212644.3 | |
| Accession Version | XM_005212644.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2430bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-01-25 | |
| Organism | Bos taurus(cattle) | |
| Product | striatin isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104293.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005212644.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGACGAGC AAGCGGGTCC CGGTGTCTTC TTCAGCAACA ACCACCCGGC CGCCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005212701.1 |
| CDS | 140..2569 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005212644.3 |
1 | ATGGACGAGC AAGCGGGTCC CGGTGTCTTC TTCAGCAACA ACCACCCGGC CGCCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa53518 | |
| Clone ID Related Accession (Same CDS sequence) | XM_010809956.2 | |
| Accession Version | XM_010809956.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2232bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-01-25 | |
| Organism | Bos taurus(cattle) | |
| Product | striatin isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104293.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010809956.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGACGAGC AAGCGGGTCC CGGTGTCTTC TTCAGCAACA ACCACCCGGC CGCCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_010808258.1 |
| CDS | 138..2369 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_010809956.2 |
1 | ATGGACGAGC AAGCGGGTCC CGGTGTCTTC TTCAGCAACA ACCACCCGGC CGCCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Striatins as plaque molecules of zonulae adhaerentes in simple epithelia, of tessellate junctions in stratified epithelia, of cardiac composite junctions and of various size classes of lateral adherens junctions in cultures of epithelia- and carcinoma-derived cells. |
A whole-genome assembly of the domestic cow, Bos taurus. |