LOC109727415 cDNA ORF clone, Ananas comosus(pineapple)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109727415
Entrez Gene ID	109727415
Full Name	pentatricopeptide repeat-containing protein At4g31850, chloroplastic
Gene Type	protein-coding
Organism	Ananas comosus(pineapple)

mRNA and Protein(s)

mRNA	Protein	Name
XM_020257538.1	XP_020113127.1	pentatricopeptide repeat-containing protein At4g31850, chloroplastic

Pathways from BioSystems
Gene Ontology

The following LOC109727415 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109727415 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAn83352	XM_020257538.1 Latest version!	Ananas comosus pentatricopeptide repeat-containing protein At4g31850, chloroplastic (LOC109727415), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109727415 ( XM_020257538.1 ) cDNA ORF clone, Ananas comosus(pineapple) -> XP_020113127.1 Ananas comosus pentatricopeptide repeat-containing protein At4g31850, chloroplastic (LOC109727415), mRNA.

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CloneID	OAn83352
Clone ID Related Accession (Same CDS sequence)	XM_020257538.1
Accession Version	XM_020257538.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3315bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-02-14
Organism	Ananas comosus(pineapple)
Product	pentatricopeptide repeat-containing protein At4g31850, chloroplastic
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_033642.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ananas comosus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGCTCT GCTCCTCTAG GAGAATTTGT AGTAGCAGTA GCAGTTCCAG TAGTTTCGAA 
TCCACTAGAA AAGCAGCTTC TTTGAACCGA TTAGCTTCTC TAAGAAGCCG AAAAAGTAGG 
GGTTTAAGGG TTTATAAGCC GCAAAGTAGC AATCCTGGTT GCCGTTGTTG TCGATTCAGC 
GTAAAAATCG CATCTTGCGT CGAATTCGAT GAGGAATGGA GGGGTGAGGT GAGTTCGGTG 
AGTTCGGAGA ATGTAGTGGA GGTTCTCAGG TCGATTCCTG ACCCGGTCGA GGCGTTGTTG 
CTGTTTAAAT GCATCGCGTC GCAGCCTAGG GTTGTTCACA CGACGGCGTC CTTCAATTAC 
ATGCTCGAAC TTTTGAGGGT TCATGGCAGG GTGGAGGATA TGGCTCTTGT GTTTGATCTA 
ATGCAGAAGC AAATTGTGAA GAGGGATCCT GAAACTTTCT TAATTATCTT TAAAGCCCTT 
GGTGTTCGAG GCGGCCTACG GGGCGCCCCG TTCGCCCTGT CGAAGATGAA AGAAGCTGGA 
TTTGTTTTAA ATGCGTTTTC CTGCAATGGG TTGATATACT TCATTCTCCG TTCCGGGTTC 
ATTAAGGAAG CTGTTGAAGT GTATGAAAGA ATGGTTTCCG AGGGGATTAA ACCGAGTTTA 
AAGACTTATT CTGCGCTTAT GGTGGCGTTG GGGAAGAGGA GGGATGCACG GTCGGTGATG 
CGGCTTTTAA ATGAGATGGA GCGTTTGGGA TCGAGACCTA ATGTGTACAC GTTCACCATA 
TGCATACGAG TTCTCGGACA AACGGGTAGA ATCGATGAAG CTTTTGGCCT TTTGAGGAGA 
ATGGAGGACG AGGGTTGCGA ACCCGACGTT GTGACGTATA CCGTGCTCAT AGAAGTTCTC 
TGTGAAGCCG GGCGACTCAA AGAAGCGAAG GATTTGTTCT TGAAGATGAA GGCGAGCAGT 
CAGAAGCCGG ATAGAGTGAC CTACATCACA TTGCTGAACA AGTTTGGCGA TAACGGCGAT 
TTAAAATCGT TGCAGGGGTT TTTGGATGAG ATGGAATCTG ATGGTTACGA TGCTGACGTG 
GTGGTCTTTA CTATTTTTGT CGACGCTCTA TGCAAAGAAG GGAAGATCAA GGAAGCCCTA 
GGCATGTTGA AAGTGATGAA TCAAAAGGAT GTTTCGCCTA ATTTGCATAC TTACAACACC 
TTAATCGGCG GGCTGCTAAA AGCTAACAAA CGCGATCATG CTGAAGAGCT CTTTAACAGT 
ATGGATGTTC ATGGTCTTAA ACCAAATGCC TACACTTATA TCCTGTTTGT TGATTACTAC 
GGTAAATCCG GAGAATTCGA GAGAGCATTT GGGATGTATG AGATCATGAA GAGTAAGGGG 
ATTGTTCCCG ATCTTGTTGC TTGCAATGCA TGTTTGTATG GTCTCGCCGA GTCCGGTAGA 
CTAAGGCGAG CAAAGCAAGT TTTCAAGGAA CTAAGAGCTA TTGGGCTTCG CCCGGATACA 
ATTACATATA ATATGATGAT TAAGTGTTGC AACAAAGCCG GAAAAGTGGA CGAAGCTGTT 
AAGATGTTCT CTAAGATGAT AAGTAGCGGA TGCGACCCTG ATGTGATCAC AGTTAATTCT 
CTCATAGATA CACTTTATAA GGGGGGTCGA GAAGATGAAG CTTGGAATAT GTTCGAAAGG 
ATGAATTCAA TGGGTCTCGA GCCCACAGTT GCGACGTATA ACACGATATT GGCGGGATTA 
GGGAAGGAGG GTAAGGTCGA AAAAGTGATG GAGATTTTCC ACGAAATGAG CTTTCGTAGT 
TGTCCTCCTA ATATAATAAC TTACAACACG GTTTTAGATT CTCTCTGCAA AAACGGTGAG 
GTCGAGTTAG CATTGAAAAT GCTTTACGAA ATGACGGGGG AGGATCATCT GCCGGATGTT 
CTATCTTACA ACACCGTGAT AAATGGTTTG GTTAAAGAGG GGAAAATACA CGTAGCATTG 
TGGCTCTTTT ATCAGATGAG CAAAGTTCTC TTTCCCGATT TTGCCACTAT ATGCAGTATT 
CTTCCTGCTT TGGTGAAAAA TGGGCTTATT GAGGAAGCGT TGCACATTAC CGAGAAATAT 
ACTCTTCAGA GTGATGCCGA TACGGATAGA TCTTCGTGGC AAGCTCTAAT GGAAGGGATA 
CTAAAGAAAG CTGGAATAGA GAAATCTGTC GATTTTTCTG AACAAAGCGC TGTAAAAAGC 
ATTTGCCTGA ATGACTTCTT TCTGTGCCCA TTGATTAGGT TTCTTTGTAA GAACAAGAAA 
GTTCTCGATG CGCGCAAACT GTTGGATAAG TTCAAGACAT TTGGTGTTTC GCCGACCAGC 
GAAGCATATT ATCCTATAAT TGTTGGCCTT GTCGAAGCGC ACTTAACTGA CGTTGCTGAA 
AACTTGTTTT CAGAAATGAA AATGGCTGGG TGTTGCCCGG ACGCGTTCGC CTACAATGCA 
ATGTTAGATG CCTTCGGGAA GTCGATGAGG ATCGAGGAAA TGTTGAAGTT GTACGAAGAG 
ATGCTTTCCA AGGGATGCAA ACCTATCAAC GTAACCTACA ATATAATCAT TTCAGGCCTT 
GTTAAGTCTA AGAGATTAGA GCAAGCTATC GACTTCTATT ATGACCTAAT GAGTAGAGAC 
TTCTCTCCCA CTCCTTGCAC CTACGGTCCC CTTATCGATG GGCTCTTTAA GTCCGGAAAG 
ATAGATGACG CCGAAAAGCT TTTCAATGAG ATGGTCGACT ACGGGTGCAA ACCCAACTGC 
GCTATCTACA ATATTCTCAT AAACGGGTTC GGAAAGGCTA GAAATGCAGA CAAGGCGTGC 
GAGTTATTCA ACGAGATGGT TAAGGCGGGA ATAAGGCCCG ATGTGAAGTC CTACACGGTT 
CTTATTGACA CCTTTTGCGC GGTGGGGAGA GCAGAGGACG CTTTCGCCTA TTTTGAAGAG 
CTAATTACAC TGGGACTCGA GCCCGACCTC ATCACGTATA ACTTAATGAT CAACGGCCTC 
GGAAGGTCTC GGAGGCTAGA GGAGGCGGTC GCGCTCTTCG ACGAGATGCA GAAGAAGGGA 
ATTTACCCCG ATTTGTATAC TTACAATTCA CTAATTCTCA ACTACGGTAA GTTAGGAAAG 
CTTGATGAAG CTGGAAAGAT GTACGAAGAG CTCCAACTGC GAGGGTTCAG ACCGAATGTG 
TTCACATACA ATGCTCTCAT TCAAGGGTAT AGTAGGTCGG GTAGTACCGA ACGTGCTTAC 
GCTGTATATG AAAAGATGAT GGCTCGAGGA TGCAACCCCA ATTCAGGTAC ATATGCACAG 
CTTCCTAACC GATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_020113127.1
CDS	190..3504
Translation	MELCSSRRICSSSSSSSSFESTRKAASLNRLASLRSRKSRGLRVYKPQSSNPGCRCCRFSVKIASCVEFDEEWRGEVSSVSSENVVEVLRSIPDPVEALLLFKCIASQPRVVHTTASFNYMLELLRVHGRVEDMALVFDLMQKQIVKRDPETFLIIFKALGVRGGLRGAPFALSKMKEAGFVLNAFSCNGLIYFILRSGFIKEAVEVYERMVSEGIKPSLKTYSALMVALGKRRDARSVMRLLNEMERLGSRPNVYTFTICIRVLGQTGRIDEAFGLLRRMEDEGCEPDVVTYTVLIEVLCEAGRLKEAKDLFLKMKASSQKPDRVTYITLLNKFGDNGDLKSLQGFLDEMESDGYDADVVVFTIFVDALCKEGKIKEALGMLKVMNQKDVSPNLHTYNTLIGGLLKANKRDHAEELFNSMDVHGLKPNAYTYILFVDYYGKSGEFERAFGMYEIMKSKGIVPDLVACNACLYGLAESGRLRRAKQVFKELRAIGLRPDTITYNMMIKCCNKAGKVDEAVKMFSKMISSGCDPDVITVNSLIDTLYKGGREDEAWNMFERMNSMGLEPTVATYNTILAGLGKEGKVEKVMEIFHEMSFRSCPPNIITYNTVLDSLCKNGEVELALKMLYEMTGEDHLPDVLSYNTVINGLVKEGKIHVALWLFYQMSKVLFPDFATICSILPALVKNGLIEEALHITEKYTLQSDADTDRSSWQALMEGILKKAGIEKSVDFSEQSAVKSICLNDFFLCPLIRFLCKNKKVLDARKLLDKFKTFGVSPTSEAYYPIIVGLVEAHLTDVAENLFSEMKMAGCCPDAFAYNAMLDAFGKSMRIEEMLKLYEEMLSKGCKPINVTYNIIISGLVKSKRLEQAIDFYYDLMSRDFSPTPCTYGPLIDGLFKSGKIDDAEKLFNEMVDYGCKPNCAIYNILINGFGKARNADKACELFNEMVKAGIRPDVKSYTVLIDTFCAVGRAEDAFAYFEELITLGLEPDLITYNLMINGLGRSRRLEEAVALFDEMQKKGIYPDLYTYNSLILNYGKLGKLDEAGKMYEELQLRGFRPNVFTYNALIQGYSRSGSTERAYAVYEKMMARGCNPNSGTYAQLPNR

Target ORF information:

RefSeq Version	XM_020257538.1
Organism	Ananas comosus(pineapple)
Definition	Ananas comosus pentatricopeptide repeat-containing protein At4g31850, chloroplastic (LOC109727415), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_020257538.1

ORF Insert Sequence:

ATGGAGCTCT GCTCCTCTAG GAGAATTTGT AGTAGCAGTA GCAGTTCCAG TAGTTTCGAA 
TCCACTAGAA AAGCAGCTTC TTTGAACCGA TTAGCTTCTC TAAGAAGCCG AAAAAGTAGG 
GGTTTAAGGG TTTATAAGCC GCAAAGTAGC AATCCTGGTT GCCGTTGTTG TCGATTCAGC 
GTAAAAATCG CATCTTGCGT CGAATTCGAT GAGGAATGGA GGGGTGAGGT GAGTTCGGTG 
AGTTCGGAGA ATGTAGTGGA GGTTCTCAGG TCGATTCCTG ACCCGGTCGA GGCGTTGTTG 
CTGTTTAAAT GCATCGCGTC GCAGCCTAGG GTTGTTCACA CGACGGCGTC CTTCAATTAC 
ATGCTCGAAC TTTTGAGGGT TCATGGCAGG GTGGAGGATA TGGCTCTTGT GTTTGATCTA 
ATGCAGAAGC AAATTGTGAA GAGGGATCCT GAAACTTTCT TAATTATCTT TAAAGCCCTT 
GGTGTTCGAG GCGGCCTACG GGGCGCCCCG TTCGCCCTGT CGAAGATGAA AGAAGCTGGA 
TTTGTTTTAA ATGCGTTTTC CTGCAATGGG TTGATATACT TCATTCTCCG TTCCGGGTTC 
ATTAAGGAAG CTGTTGAAGT GTATGAAAGA ATGGTTTCCG AGGGGATTAA ACCGAGTTTA 
AAGACTTATT CTGCGCTTAT GGTGGCGTTG GGGAAGAGGA GGGATGCACG GTCGGTGATG 
CGGCTTTTAA ATGAGATGGA GCGTTTGGGA TCGAGACCTA ATGTGTACAC GTTCACCATA 
TGCATACGAG TTCTCGGACA AACGGGTAGA ATCGATGAAG CTTTTGGCCT TTTGAGGAGA 
ATGGAGGACG AGGGTTGCGA ACCCGACGTT GTGACGTATA CCGTGCTCAT AGAAGTTCTC 
TGTGAAGCCG GGCGACTCAA AGAAGCGAAG GATTTGTTCT TGAAGATGAA GGCGAGCAGT 
CAGAAGCCGG ATAGAGTGAC CTACATCACA TTGCTGAACA AGTTTGGCGA TAACGGCGAT 
TTAAAATCGT TGCAGGGGTT TTTGGATGAG ATGGAATCTG ATGGTTACGA TGCTGACGTG 
GTGGTCTTTA CTATTTTTGT CGACGCTCTA TGCAAAGAAG GGAAGATCAA GGAAGCCCTA 
GGCATGTTGA AAGTGATGAA TCAAAAGGAT GTTTCGCCTA ATTTGCATAC TTACAACACC 
TTAATCGGCG GGCTGCTAAA AGCTAACAAA CGCGATCATG CTGAAGAGCT CTTTAACAGT 
ATGGATGTTC ATGGTCTTAA ACCAAATGCC TACACTTATA TCCTGTTTGT TGATTACTAC 
GGTAAATCCG GAGAATTCGA GAGAGCATTT GGGATGTATG AGATCATGAA GAGTAAGGGG 
ATTGTTCCCG ATCTTGTTGC TTGCAATGCA TGTTTGTATG GTCTCGCCGA GTCCGGTAGA 
CTAAGGCGAG CAAAGCAAGT TTTCAAGGAA CTAAGAGCTA TTGGGCTTCG CCCGGATACA 
ATTACATATA ATATGATGAT TAAGTGTTGC AACAAAGCCG GAAAAGTGGA CGAAGCTGTT 
AAGATGTTCT CTAAGATGAT AAGTAGCGGA TGCGACCCTG ATGTGATCAC AGTTAATTCT 
CTCATAGATA CACTTTATAA GGGGGGTCGA GAAGATGAAG CTTGGAATAT GTTCGAAAGG 
ATGAATTCAA TGGGTCTCGA GCCCACAGTT GCGACGTATA ACACGATATT GGCGGGATTA 
GGGAAGGAGG GTAAGGTCGA AAAAGTGATG GAGATTTTCC ACGAAATGAG CTTTCGTAGT 
TGTCCTCCTA ATATAATAAC TTACAACACG GTTTTAGATT CTCTCTGCAA AAACGGTGAG 
GTCGAGTTAG CATTGAAAAT GCTTTACGAA ATGACGGGGG AGGATCATCT GCCGGATGTT 
CTATCTTACA ACACCGTGAT AAATGGTTTG GTTAAAGAGG GGAAAATACA CGTAGCATTG 
TGGCTCTTTT ATCAGATGAG CAAAGTTCTC TTTCCCGATT TTGCCACTAT ATGCAGTATT 
CTTCCTGCTT TGGTGAAAAA TGGGCTTATT GAGGAAGCGT TGCACATTAC CGAGAAATAT 
ACTCTTCAGA GTGATGCCGA TACGGATAGA TCTTCGTGGC AAGCTCTAAT GGAAGGGATA 
CTAAAGAAAG CTGGAATAGA GAAATCTGTC GATTTTTCTG AACAAAGCGC TGTAAAAAGC 
ATTTGCCTGA ATGACTTCTT TCTGTGCCCA TTGATTAGGT TTCTTTGTAA GAACAAGAAA 
GTTCTCGATG CGCGCAAACT GTTGGATAAG TTCAAGACAT TTGGTGTTTC GCCGACCAGC 
GAAGCATATT ATCCTATAAT TGTTGGCCTT GTCGAAGCGC ACTTAACTGA CGTTGCTGAA 
AACTTGTTTT CAGAAATGAA AATGGCTGGG TGTTGCCCGG ACGCGTTCGC CTACAATGCA 
ATGTTAGATG CCTTCGGGAA GTCGATGAGG ATCGAGGAAA TGTTGAAGTT GTACGAAGAG 
ATGCTTTCCA AGGGATGCAA ACCTATCAAC GTAACCTACA ATATAATCAT TTCAGGCCTT 
GTTAAGTCTA AGAGATTAGA GCAAGCTATC GACTTCTATT ATGACCTAAT GAGTAGAGAC 
TTCTCTCCCA CTCCTTGCAC CTACGGTCCC CTTATCGATG GGCTCTTTAA GTCCGGAAAG 
ATAGATGACG CCGAAAAGCT TTTCAATGAG ATGGTCGACT ACGGGTGCAA ACCCAACTGC 
GCTATCTACA ATATTCTCAT AAACGGGTTC GGAAAGGCTA GAAATGCAGA CAAGGCGTGC 
GAGTTATTCA ACGAGATGGT TAAGGCGGGA ATAAGGCCCG ATGTGAAGTC CTACACGGTT 
CTTATTGACA CCTTTTGCGC GGTGGGGAGA GCAGAGGACG CTTTCGCCTA TTTTGAAGAG 
CTAATTACAC TGGGACTCGA GCCCGACCTC ATCACGTATA ACTTAATGAT CAACGGCCTC 
GGAAGGTCTC GGAGGCTAGA GGAGGCGGTC GCGCTCTTCG ACGAGATGCA GAAGAAGGGA 
ATTTACCCCG ATTTGTATAC TTACAATTCA CTAATTCTCA ACTACGGTAA GTTAGGAAAG 
CTTGATGAAG CTGGAAAGAT GTACGAAGAG CTCCAACTGC GAGGGTTCAG ACCGAATGTG 
TTCACATACA ATGCTCTCAT TCAAGGGTAT AGTAGGTCGG GTAGTACCGA ACGTGCTTAC 
GCTGTATATG AAAAGATGAT GGCTCGAGGA TGCAACCCCA ATTCAGGTAC ATATGCACAG 
CTTCCTAACC GATAA