LOC100638898 cDNA ORF clone, Amphimedon queenslandica

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100638898
Entrez Gene ID	100638898
Full Name	leucine-rich repeat protein SHOC-2-like
Gene Type	protein-coding
Organism	Amphimedon queenslandica

mRNA and Protein(s)

mRNA	Protein	Name
XM_003386154.3	XP_003386202.2	leucine-rich repeat protein SHOC-2-like

Pathways from BioSystems
Gene Ontology

The following LOC100638898 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100638898 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAm16797	XM_003386154.3 Latest version!	Amphimedon queenslandica leucine-rich repeat protein SHOC-2-like (LOC100638898), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100638898 ( XM_003386154.3 ) cDNA ORF clone, Amphimedon queenslandica -> XP_003386202.2 Amphimedon queenslandica leucine-rich repeat protein SHOC-2-like (LOC100638898), mRNA.

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CloneID	OAm16797
Clone ID Related Accession (Same CDS sequence)	XM_003386154.3
Accession Version	XM_003386154.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1989bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-01-17
Organism	Amphimedon queenslandica
Product	leucine-rich repeat protein SHOC-2-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003546330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 18, 2017 this sequence version replaced XM_003386154.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Amphimedon queenslandica Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTACTCTA ATTGTAAGAA AAATTGTGGG AAATATTTTC CATCCAAAGA AGAGATCAAG 
AGAAGACTGC ACCAGTGTGT GATGGATAAG ATAAAGCAGA AGCTGAAGGG AGCGTTCAAA 
GGAGAGGAGG AGGAGGATCA ATCATTTGAC AGGGAACTGG AAGAAGAGCC AGTACGAATA 
GGAGGGGGCG GGACAGGGGG AGGAGTCTCA TTCTCAGAGG AATCTGGAGA GGAGCCTCGT 
AGGAAGCCGA GGTTTGCCGA TGAACCAAGC GACCAACCAG TACCAGAGAG GAAGGAGAGG 
AAACCAAGGT TTGCCGATGA AGATGATGGA GGAGGAGGAG GAGGTGTTCG GTTTGACACA 
TCATCTCCAA GTATTGAAAA AAAGAAAAGC AAAGCAAAGA AAGGAAAAGG TGTTACTTTG 
ATGGTTCCGG AAGGAGAAGG TGAGAAACCT AAACCGGGTG GAGTCAAGGG AAAGGACAAG 
AAATCAGTTC AAGCACCAAC TGCAGACATT AAGAAGAAGA TCAGCAAATG CAAAGAAGAA 
AAGTCCATCA TCTTAGATCT CTCAAAATCT GATATAGCTG TTCTTCCTGG TAATATAAAA 
GAGGTCTCGT TCATAGAGGA ACTGTATCTC TATGGCAACC GTGTATCAAC CCTCCCGCCT 
GAGGTTGGGA ATTTAAAGAA GTTAAGGAAA CTGGCATTGA ATGAGAACAT GTTGACTGAT 
CTACCTAATG AGCTAAAGCA GTGTGTTAGT CTATCAGTTC TTGATTTACG TCACAATAAG 
CTGAGAGAAG TCCCTCCTGT GGTCTGTGAG CTGGCATCGT TACAGACCCT CTACTTGAGG 
TTTAATAAAA TAGTTTCTGT TAATCCTGCA ATTGGGAATT TAAGGAATTT GACTTCTTTG 
ATTTTACGTG AAAACAAGAT TCGTGATTTG CCCTCAACTA TTGGCTCCTT AACCAGGCTC 
ACTGCTCTTG ATGTCTCTCA CAATCATTTG GAGAGTCTAC CTGACGAGAT TGCTAACTGC 
AGTCAGCTCT CATTCCTTCA ACTGCAACAC AATGACCTAA CAGAGTTACC TGTTGCTATT 
GGCAACTTGA AGTCCCTCAA GAGGCTAGGG CTCCAGTATA ACCAGCTCTC TGAACTCCCT 
CCATCTTTAT GTAGCTGCAC TGAACTCAAT GAGATAGGGC TAGAGTCCAA CACACTGACA 
TCACTTCCTG ATCAGTTGTT TGGATCTGTC ACCAAGATGT CCAATATCCA GTTAAGCAGG 
AACAGTTTCA CCAGTTTCCC TATATCAGAT CCCTCCCATC TTGTCAGTGT TAATTCACTA 
ATGATTGAAC ATAATCATAT CACTAAAGTT CCTCTTGGAA TATTCTCTCA AGCAACTGAA 
CTGACTCAGC TTAGTCTGAG AGACAATCAA ATAACTACAC TGCCACTAGA TTTTGGTACT 
TGGGTGACAT TGACTGAGCT TAATCTTGGG ACCAATCAGT TGTCTTCAAT ACCTGAGGAG 
ATTCAGGAAC TGACAAGATT AGAAATACTA GTACTGGCCA ATAACACCAT TAGGACGCTG 
CCTAAAGGAA TATCAGCTTT GCGTAACTTG AAGGAACTTG ATCTTGAAGG GAATAAACTG 
GAATATCTGG CAACAGAAAT AAGTTACCTG AGGGAACTGA CTAAGTTAAA TGTTCAGTCG 
AACAGGATTA CTAATCTGCC ACGAGGCCTG GGTCTATTGG TTAATCTGAA GCACCTCAGT 
GCCGGAGAGA ACAACCTCCT TGAGATACCG GCAGAGATAG GGACCTTAGA GAACCTTGAG 
GAACTCTATC TCAACGATAA CCCCAACCTT CAGTTCCTCC CTTACGAGCT AGCCCTTTGC 
AAGAGACTAG CCCTCATGTC CGTTGAAGGT TGTCCCCTAA GCAGACTCCC TCCTCATGTT 
GTGGACGGAG GCCCTTCTGC TATTATACAG CATCTCAAGT TTCAAGGTCC TTATCGCGGG 
CTGAGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003386202.2
CDS	27..2015
Translation	MYSNCKKNCGKYFPSKEEIKRRLHQCVMDKIKQKLKGAFKGEEEEDQSFDRELEEEPVRIGGGGTGGGVSFSEESGEEPRRKPRFADEPSDQPVPERKERKPRFADEDDGGGGGGVRFDTSSPSIEKKKSKAKKGKGVTLMVPEGEGEKPKPGGVKGKDKKSVQAPTADIKKKISKCKEEKSIILDLSKSDIAVLPGNIKEVSFIEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLPNELKQCVSLSVLDLRHNKLREVPPVVCELASLQTLYLRFNKIVSVNPAIGNLRNLTSLILRENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSFLQLQHNDLTELPVAIGNLKSLKRLGLQYNQLSELPPSLCSCTELNEIGLESNTLTSLPDQLFGSVTKMSNIQLSRNSFTSFPISDPSHLVSVNSLMIEHNHITKVPLGIFSQATELTQLSLRDNQITTLPLDFGTWVTLTELNLGTNQLSSIPEEIQELTRLEILVLANNTIRTLPKGISALRNLKELDLEGNKLEYLATEISYLRELTKLNVQSNRITNLPRGLGLLVNLKHLSAGENNLLEIPAEIGTLENLEELYLNDNPNLQFLPYELALCKRLALMSVEGCPLSRLPPHVVDGGPSAIIQHLKFQGPYRGLR

Target ORF information:

RefSeq Version	XM_003386154.3
Organism	Amphimedon queenslandica
Definition	Amphimedon queenslandica leucine-rich repeat protein SHOC-2-like (LOC100638898), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003386154.3

ORF Insert Sequence:

ATGTACTCTA ATTGTAAGAA AAATTGTGGG AAATATTTTC CATCCAAAGA AGAGATCAAG 
AGAAGACTGC ACCAGTGTGT GATGGATAAG ATAAAGCAGA AGCTGAAGGG AGCGTTCAAA 
GGAGAGGAGG AGGAGGATCA ATCATTTGAC AGGGAACTGG AAGAAGAGCC AGTACGAATA 
GGAGGGGGCG GGACAGGGGG AGGAGTCTCA TTCTCAGAGG AATCTGGAGA GGAGCCTCGT 
AGGAAGCCGA GGTTTGCCGA TGAACCAAGC GACCAACCAG TACCAGAGAG GAAGGAGAGG 
AAACCAAGGT TTGCCGATGA AGATGATGGA GGAGGAGGAG GAGGTGTTCG GTTTGACACA 
TCATCTCCAA GTATTGAAAA AAAGAAAAGC AAAGCAAAGA AAGGAAAAGG TGTTACTTTG 
ATGGTTCCGG AAGGAGAAGG TGAGAAACCT AAACCGGGTG GAGTCAAGGG AAAGGACAAG 
AAATCAGTTC AAGCACCAAC TGCAGACATT AAGAAGAAGA TCAGCAAATG CAAAGAAGAA 
AAGTCCATCA TCTTAGATCT CTCAAAATCT GATATAGCTG TTCTTCCTGG TAATATAAAA 
GAGGTCTCGT TCATAGAGGA ACTGTATCTC TATGGCAACC GTGTATCAAC CCTCCCGCCT 
GAGGTTGGGA ATTTAAAGAA GTTAAGGAAA CTGGCATTGA ATGAGAACAT GTTGACTGAT 
CTACCTAATG AGCTAAAGCA GTGTGTTAGT CTATCAGTTC TTGATTTACG TCACAATAAG 
CTGAGAGAAG TCCCTCCTGT GGTCTGTGAG CTGGCATCGT TACAGACCCT CTACTTGAGG 
TTTAATAAAA TAGTTTCTGT TAATCCTGCA ATTGGGAATT TAAGGAATTT GACTTCTTTG 
ATTTTACGTG AAAACAAGAT TCGTGATTTG CCCTCAACTA TTGGCTCCTT AACCAGGCTC 
ACTGCTCTTG ATGTCTCTCA CAATCATTTG GAGAGTCTAC CTGACGAGAT TGCTAACTGC 
AGTCAGCTCT CATTCCTTCA ACTGCAACAC AATGACCTAA CAGAGTTACC TGTTGCTATT 
GGCAACTTGA AGTCCCTCAA GAGGCTAGGG CTCCAGTATA ACCAGCTCTC TGAACTCCCT 
CCATCTTTAT GTAGCTGCAC TGAACTCAAT GAGATAGGGC TAGAGTCCAA CACACTGACA 
TCACTTCCTG ATCAGTTGTT TGGATCTGTC ACCAAGATGT CCAATATCCA GTTAAGCAGG 
AACAGTTTCA CCAGTTTCCC TATATCAGAT CCCTCCCATC TTGTCAGTGT TAATTCACTA 
ATGATTGAAC ATAATCATAT CACTAAAGTT CCTCTTGGAA TATTCTCTCA AGCAACTGAA 
CTGACTCAGC TTAGTCTGAG AGACAATCAA ATAACTACAC TGCCACTAGA TTTTGGTACT 
TGGGTGACAT TGACTGAGCT TAATCTTGGG ACCAATCAGT TGTCTTCAAT ACCTGAGGAG 
ATTCAGGAAC TGACAAGATT AGAAATACTA GTACTGGCCA ATAACACCAT TAGGACGCTG 
CCTAAAGGAA TATCAGCTTT GCGTAACTTG AAGGAACTTG ATCTTGAAGG GAATAAACTG 
GAATATCTGG CAACAGAAAT AAGTTACCTG AGGGAACTGA CTAAGTTAAA TGTTCAGTCG 
AACAGGATTA CTAATCTGCC ACGAGGCCTG GGTCTATTGG TTAATCTGAA GCACCTCAGT 
GCCGGAGAGA ACAACCTCCT TGAGATACCG GCAGAGATAG GGACCTTAGA GAACCTTGAG 
GAACTCTATC TCAACGATAA CCCCAACCTT CAGTTCCTCC CTTACGAGCT AGCCCTTTGC 
AAGAGACTAG CCCTCATGTC CGTTGAAGGT TGTCCCCTAA GCAGACTCCC TCCTCATGTT 
GTGGACGGAG GCCCTTCTGC TATTATACAG CATCTCAAGT TTCAAGGTCC TTATCGCGGG 
CTGAGGTGA