LOC103039127 cDNA ORF clone, Astyanax mexicanus(Mexican tetra)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103039127
Entrez Gene ID	103039127
Full Name	E3 ubiquitin-protein ligase TRIM39-like
Gene Type	protein-coding
Organism	Astyanax mexicanus(Mexican tetra)

mRNA and Protein(s)

mRNA	Protein	Name
XM_007233798.2	XP_007233860.2	zinc finger protein RFP-like
XM_022678339.1	XP_022534060.1	E3 ubiquitin-protein ligase TRIM39-like

Pathways from BioSystems
Gene Ontology

The following LOC103039127 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103039127 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAs18547	XM_007233798.2 Latest version!	Astyanax mexicanus zinc finger protein RFP-like (LOC103039127), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103039127 ( XM_007233798.2 ) cDNA ORF clone, Astyanax mexicanus(Mexican tetra) -> XP_007233860.2 Astyanax mexicanus zinc finger protein RFP-like (LOC103039127), mRNA.

Price & Availability↑

CloneID	OAs18547
Clone ID Related Accession (Same CDS sequence)	XM_007233798.2
Accession Version	XM_007233798.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1446bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-02-10
Organism	Astyanax mexicanus(Mexican tetra)
Product	zinc finger protein RFP-like
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006738960.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 11, 2016 this sequence version replaced XM_007233798.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Astyanax mexicanus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 3% of CDS bases ##RefSeq-Attributes-END##

ATGGGCCGAC AATGCGAGAG GCTGGACAGA GAGTTTTACT GCCTCCAGAT CAATACAACA 
CTGAGAGAGG TTGCAGATCA CTTCAAGAAG AAAAGCGTTC TAGATAAACC TGAGGTTCTC 
TGTGACGTCT GCACTGGAGA GAAGCTGAAG GCCTTCAAGT TCTGTTTGAA TTGTGCAGCA 
ACGTTCTGTA AGACTCATCT GGAGCTACAC TCAGTTGGGA CACTTAAGAA TCACAAGCTA 
ATTGATCCAG TCAAGAACCT GGAGGACTAC ATCTGCCAGA AGCACGAGAA ACCCCTGGAG 
CTGTTCTGTA GAGATGATCA GACGTGTGTG TGTCAGTTCT GCACTGAGGG AGATCATAAA 
AATCACAACA CTGTTCCCAT TGATCAGACA CAGCTGGGAA AGATGCACAC AGAGATACAG 
CCGATGATCC AAGACAGAAT AAAGAAAATT GAAGAGATCA AACGATCACT GGAGCTCAGA 
AAAAGAAACA CAGAGAAGGA GATTTCAGAC AGTTTTGAAG TCTTCACTGA TCTGATACGC 
TCCATTGAGA GAAGTCAGGC TGAGCTGCTT GAGGTGATGG AGGAGAAGCA GAAAGCAGCA 
GAGAGGCAGG CTGAAGAGCT CATTAAAGAT CTGGAGCAGG AAATCACTGA GCTAAAGAGG 
AGAGACACTG AGCTGGAGCA GCTCTCACAC ACTGAGGATC ACCTCCACCT CCTACAGGTC 
AGTGTTCCTC TATCTGCTCA ATGTCACCGA CCACTGATCA ACAACTGGAC TGATATCAGT 
ATAGACCCTC CTCTGAGATT AGAGCCAGTG AGGAACGCTC TGTCTCAACT TCAGAAGAGT 
CTGTATAAGA AAAAGACAGA GACAGAGCTG AAGAGGACAC GACTGTATGC AGTGGACGTG 
ACTCTGGATC CTGATACAGC AAATCCCTTT CTCATCCTCT CTGATGATGG AAAACAAGTG 
AGATGTGGAG ACACAAAACA GAATCTTCCT GACAATCCAG AGAGATTTAA TTATTGTGTC 
TGTGTTCTGG GAAAGGAGGG ATTCTCCTCT GGGAGATTTT ACTATGAGGT GCCGGTGAAC 
AGGAAGACTG ACTGGGATTT AGGAGTGGTC AGAGAGTCTG TTAACAGGAA GGGGATTTAT 
GCACTGAGCC CACAGAATGG ATTCTGGACT GTGGTTCTGA GGAATGGAAA TCAGTATAAG 
GTTTGTGCTG ATCCTCCAGT CCTCCTCTCT CTGAGAGAGA AGTCCCAGAA GGTGGGGGTG 
TTTGTGGATT ATGAGGAGGG TCTGGTCTCC TTTTATGATG TGGAGGCCAG GTCTCATATC 
TACTCTTTCA CTGGTCAGTC TTTCACTGAG AAACTCTATC CATTCTTCAG CCCTTTTCTT 
AACAATGGAG GTAAAAACTC AGCTCCACTG ATCATCACAC CTGTTATTAA GACTGAATAC 
TGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_007233860.2
CDS	1..1446
Translation	MGRQCERLDREFYCLQINTTLREVADHFKKKSVLDKPEVLCDVCTGEKLKAFKFCLNCAATFCKTHLELHSVGTLKNHKLIDPVKNLEDYICQKHEKPLELFCRDDQTCVCQFCTEGDHKNHNTVPIDQTQLGKMHTEIQPMIQDRIKKIEEIKRSLELRKRNTEKEISDSFEVFTDLIRSIERSQAELLEVMEEKQKAAERQAEELIKDLEQEITELKRRDTELEQLSHTEDHLHLLQVSVPLSAQCHRPLINNWTDISIDPPLRLEPVRNALSQLQKSLYKKKTETELKRTRLYAVDVTLDPDTANPFLILSDDGKQVRCGDTKQNLPDNPERFNYCVCVLGKEGFSSGRFYYEVPVNRKTDWDLGVVRESVNRKGIYALSPQNGFWTVVLRNGNQYKVCADPPVLLSLREKSQKVGVFVDYEEGLVSFYDVEARSHIYSFTGQSFTEKLYPFFSPFLNNGGKNSAPLIITPVIKTEYC

Target ORF information:

RefSeq Version	XM_007233798.2
Organism	Astyanax mexicanus(Mexican tetra)
Definition	Astyanax mexicanus zinc finger protein RFP-like (LOC103039127), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_007233798.2

ORF Insert Sequence:

ATGGGCCGAC AATGCGAGAG GCTGGACAGA GAGTTTTACT GCCTCCAGAT CAATACAACA 
CTGAGAGAGG TTGCAGATCA CTTCAAGAAG AAAAGCGTTC TAGATAAACC TGAGGTTCTC 
TGTGACGTCT GCACTGGAGA GAAGCTGAAG GCCTTCAAGT TCTGTTTGAA TTGTGCAGCA 
ACGTTCTGTA AGACTCATCT GGAGCTACAC TCAGTTGGGA CACTTAAGAA TCACAAGCTA 
ATTGATCCAG TCAAGAACCT GGAGGACTAC ATCTGCCAGA AGCACGAGAA ACCCCTGGAG 
CTGTTCTGTA GAGATGATCA GACGTGTGTG TGTCAGTTCT GCACTGAGGG AGATCATAAA 
AATCACAACA CTGTTCCCAT TGATCAGACA CAGCTGGGAA AGATGCACAC AGAGATACAG 
CCGATGATCC AAGACAGAAT AAAGAAAATT GAAGAGATCA AACGATCACT GGAGCTCAGA 
AAAAGAAACA CAGAGAAGGA GATTTCAGAC AGTTTTGAAG TCTTCACTGA TCTGATACGC 
TCCATTGAGA GAAGTCAGGC TGAGCTGCTT GAGGTGATGG AGGAGAAGCA GAAAGCAGCA 
GAGAGGCAGG CTGAAGAGCT CATTAAAGAT CTGGAGCAGG AAATCACTGA GCTAAAGAGG 
AGAGACACTG AGCTGGAGCA GCTCTCACAC ACTGAGGATC ACCTCCACCT CCTACAGGTC 
AGTGTTCCTC TATCTGCTCA ATGTCACCGA CCACTGATCA ACAACTGGAC TGATATCAGT 
ATAGACCCTC CTCTGAGATT AGAGCCAGTG AGGAACGCTC TGTCTCAACT TCAGAAGAGT 
CTGTATAAGA AAAAGACAGA GACAGAGCTG AAGAGGACAC GACTGTATGC AGTGGACGTG 
ACTCTGGATC CTGATACAGC AAATCCCTTT CTCATCCTCT CTGATGATGG AAAACAAGTG 
AGATGTGGAG ACACAAAACA GAATCTTCCT GACAATCCAG AGAGATTTAA TTATTGTGTC 
TGTGTTCTGG GAAAGGAGGG ATTCTCCTCT GGGAGATTTT ACTATGAGGT GCCGGTGAAC 
AGGAAGACTG ACTGGGATTT AGGAGTGGTC AGAGAGTCTG TTAACAGGAA GGGGATTTAT 
GCACTGAGCC CACAGAATGG ATTCTGGACT GTGGTTCTGA GGAATGGAAA TCAGTATAAG 
GTTTGTGCTG ATCCTCCAGT CCTCCTCTCT CTGAGAGAGA AGTCCCAGAA GGTGGGGGTG 
TTTGTGGATT ATGAGGAGGG TCTGGTCTCC TTTTATGATG TGGAGGCCAG GTCTCATATC 
TACTCTTTCA CTGGTCAGTC TTTCACTGAG AAACTCTATC CATTCTTCAG CCCTTTTCTT 
AACAATGGAG GTAAAAACTC AGCTCCACTG ATCATCACAC CTGTTATTAA GACTGAATAC 
TGTTAG