c1qtnf1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	c1qtnf1
Entrez Gene ID	550573
Full Name	C1q and TNF related 1
Synonyms	zgc:113062
General protein information	Preferred Names C1q and TNF related 1 Names complement C1q tumor necrosis factor-related protein 1 C1q and tumor necrosis factor related protein 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017358459.1	XP_017213948.1	complement C1q tumor necrosis factor-related protein 1 isoform X1
XM_021480107.1	XP_021335782.1	complement C1q tumor necrosis factor-related protein 1 isoform X1
NM_001017875.2	NP_001017875.1	complement C1q tumor necrosis factor-related protein 1 precursor

Pathways from BioSystems

Homologies

Homo sapiens (human)	C1QTNF1	NP_940995.1
Rattus norvegicus (Norway rat)	C1qtnf1	NP_001007676.1
Danio rerio (zebrafish)	LOC100538079	XP_003199675.1
	C1QTNF1	XP_001109369.1
Bos taurus (cattle)	C1QTNF1	NP_001076878.1
Gallus gallus (chicken)	C1QTNF1	XP_004946346.1
Canis lupus familiaris (dog)	C1QTNF1	XP_005624211.1
Mus musculus (house mouse)	C1qtnf1	NP_001191058.1
Danio rerio (zebrafish)	c1qtnf1	NP_001017875.1
Pan troglodytes (chimpanzee)	C1QTNF1	XP_003315811.1

Gene Ontology
Bibliography

Related articles in PubMed

Zebrafish akt2 is essential for survival, growth, bone development, and glucose homeostasis.
Zhang D, Wang J, Zhou C, Xiao W
Mechanisms of development14342-52(2017 Feb)

Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and mammalian lung.
Zheng W, Wang Z, Collins JE, Andrews RM, Stemple D, Gong Z
PloS one6(8)e24019(2011)

Characterization of C1q in teleosts: insight into the molecular and functional evolution of C1q family and classical pathway.
Hu YL, Pan XM, Xiang LX, Shao JZ
The Journal of biological chemistry285(37)28777-86(2010 Sep)

Bioinformatic identification of genes encoding C1q-domain-containing proteins in zebrafish.
Mei J, Gui J
Journal of genetics and genomics = Yi chuan xue bao35(1)17-24(2008 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following c1qtnf1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the c1qtnf1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa98540	NM_001017875.2 Latest version!	Danio rerio C1q and TNF related 1 (c1qtnf1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
ODa54456	XM_017358459.1 Latest version!	Danio rerio C1q and tumor necrosis factor related protein 1 (c1qtnf1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
ODa54456	XM_021480107.1 Latest version!	Danio rerio C1q and TNF related 1 (c1qtnf1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

c1qtnf1 ( NM_001017875.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001017875.1 Danio rerio C1q and TNF related 1 (c1qtnf1), mRNA.

Price & Availability↑

CloneID	ODa98540
Clone ID Related Accession (Same CDS sequence)	NM_001017875.2
Accession Version	NM_001017875.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 804bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-09-06
Organism	Danio rerio(zebrafish)
Product	complement C1q tumor necrosis factor-related protein 1 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR932358.4 and CU595936.16. On Feb 17, 2016 this sequence version replaced NM_001017875.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference genome strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments. ##Evidence-Data-START## Transcript exon combination :: CK700024.1, EB896213.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476814 [ECO:0000348] ##Evidence-Data-END##

ATGCTGATGC CAAATCTGGT ACTGCTGGTG CTGGTGTTTG CCAAATGGGC TGAGCCATAC 
ATTACCCAAA ACAGAGATGG AGAGCAAGAC CCATATGAAC CCAAAGATAA TCGGAGATCC 
ACAGAATACT ACAGAGATGG CAGTGGAACG GAGTGCAGGC GGTGCTGCGA TCCTGCAGAA 
GATCCCCCTC AATTTGCCAG TCCACATGCA CAGTACCAAA TTGTGCCACA GATAAACATC 
ACTATCCTGA AAGGGGAGAA AGGAGACACA GGCGAGCGAG GACTCCATGG GAAATCTGGC 
ACATCAGGAA AAAATGGACC CAGAGGGCCC CATGGTGTAA AGGGAACCAA AGGCAGCGTC 
GGTGCTCCTG GAGAATCCTG TAAGTCCTAC TACGCTGCAT TCTCTGTGGG CCGCAAGAAA 
GCCCTGCACA GTAACGATTA CTACCAGACC ATGATCTTCG ACACAGAGTT TGTCAACCTG 
TATGGCCACT TCAACATGTT CACCGGCAAG TTCTTCTGCT ATATCCCCGG CATCTATTTC 
TTCAGTTTAA ATGCACACAG TTGGAACCAG AAAGAAACGT ACTTGCACCT AATGAAGAAT 
GAGCAGGAGA TGGCCATTCT GTATGCTCAG CCCAGCGATC GCTCCATCAT GCAGAGCCAG 
AGCCTCATGC TGGAGCTGGA GAGGGACGAT CAGGTTTGGG TTCGTCTCTT CAAGGGTGAG 
AGAGAGAATG CTGTGTTCAG TGATGACTTT GACACCTACA TCACGTTTAG TGGTTACCTT 
GTCAAGGCAA AGTCGGAAGG CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001017875.1
CDS	169..972
Translation	MLMPNLVLLVLVFAKWAEPYITQNRDGEQDPYEPKDNRRSTEYYRDGSGTECRRCCDPAEDPPQFASPHAQYQIVPQINITILKGEKGDTGERGLHGKSGTSGKNGPRGPHGVKGTKGSVGAPGESCKSYYAAFSVGRKKALHSNDYYQTMIFDTEFVNLYGHFNMFTGKFFCYIPGIYFFSLNAHSWNQKETYLHLMKNEQEMAILYAQPSDRSIMQSQSLMLELERDDQVWVRLFKGERENAVFSDDFDTYITFSGYLVKAKSEG

Target ORF information:

RefSeq Version	NM_001017875.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio C1q and TNF related 1 (c1qtnf1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001017875.2

ORF Insert Sequence:

ATGCTGATGC CAAATCTGGT ACTGCTGGTG CTGGTGTTTG CCAAATGGGC TGAGCCATAC 
ATTACCCAAA ACAGAGATGG AGAGCAAGAC CCATATGAAC CCAAAGATAA TCGGAGATCC 
ACAGAATACT ACAGAGATGG CAGTGGAACG GAGTGCAGGC GGTGCTGCGA TCCTGCAGAA 
GATCCCCCTC AATTTGCCAG TCCACATGCA CAGTACCAAA TTGTGCCACA GATAAACATC 
ACTATCCTGA AAGGGGAGAA AGGAGACACA GGCGAGCGAG GACTCCATGG GAAATCTGGC 
ACATCAGGAA AAAATGGACC CAGAGGGCCC CATGGTGTAA AGGGAACCAA AGGCAGCGTC 
GGTGCTCCTG GAGAATCCTG TAAGTCCTAC TACGCTGCAT TCTCTGTGGG CCGCAAGAAA 
GCCCTGCACA GTAACGATTA CTACCAGACC ATGATCTTCG ACACAGAGTT TGTCAACCTG 
TATGGCCACT TCAACATGTT CACCGGCAAG TTCTTCTGCT ATATCCCCGG CATCTATTTC 
TTCAGTTTAA ATGCACACAG TTGGAACCAG AAAGAAACGT ACTTGCACCT AATGAAGAAT 
GAGCAGGAGA TGGCCATTCT GTATGCTCAG CCCAGCGATC GCTCCATCAT GCAGAGCCAG 
AGCCTCATGC TGGAGCTGGA GAGGGACGAT CAGGTTTGGG TTCGTCTCTT CAAGGGTGAG 
AGAGAGAATG CTGTGTTCAG TGATGACTTT GACACCTACA TCACGTTTAG TGGTTACCTT 
GTCAAGGCAA AGTCGGAAGG CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

c1qtnf1 ( XM_017358459.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_017213948.1 Danio rerio C1q and tumor necrosis factor related protein 1 (c1qtnf1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa54456
Clone ID Related Accession (Same CDS sequence)	XM_017358459.1 , XM_021480107.1
Accession Version	XM_017358459.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	complement C1q tumor necrosis factor-related protein 1 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGAGCA AGACCCATAT GAACCCAAAG ATAATCGGAG ATCCACAGAA TACTACAGAG 
ATGGCAGGGG AGAAAGGAGA CACAGGCGAG CGAGGACTCC ATGGGAAATC TGGCACATCA 
GGAAAAAATG GACCCAGAGG GCCCCATGGT GTAAAGGGAA CCAAAGGCAG CGTCGGTGCT 
CCTGGAGAAT CCTGTAAGTC CTACTACGCT GCATTCTCTG TGGGCCGCAA GAAAGCCCTG 
CACAGTAACG ATTACTACCA GACCATGATC TTCGACACAG AGTTTGTCAA CCTGTATGGC 
CACTTCAACA TGTTCACCGG CAAGTTCTTC TGCTATATCC CCGGCATCTA TTTCTTCAGT 
TTAAATGCAC ACAGTTGGAA CCAGAAAGAA ACGTACTTGC ACCTAATGAA GAATGAGCAG 
GAGATGGCCA TTCTGTATGC TCAGCCCAGC GATCGCTCCA TCATGCAGAG CCAGAGCCTC 
ATGCTGGAGC TGGAGAGGGA CGATCAGGTT TGGGTTCGTC TCTTCAAGGG TGAGAGAGAG 
AATGCTGTGT TCAGTGATGA CTTTGACACC TACATCACGT TTAGTGGTTA CCTTGTCAAG 
GCAAAGTCGG AAGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017213948.1
CDS	79..696
Translation	MESKTHMNPKIIGDPQNTTEMAGEKGDTGERGLHGKSGTSGKNGPRGPHGVKGTKGSVGAPGESCKSYYAAFSVGRKKALHSNDYYQTMIFDTEFVNLYGHFNMFTGKFFCYIPGIYFFSLNAHSWNQKETYLHLMKNEQEMAILYAQPSDRSIMQSQSLMLELERDDQVWVRLFKGERENAVFSDDFDTYITFSGYLVKAKSEG

Target ORF information:

RefSeq Version	XM_017358459.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio C1q and tumor necrosis factor related protein 1 (c1qtnf1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017358459.1

ORF Insert Sequence:

ATGGAGAGCA AGACCCATAT GAACCCAAAG ATAATCGGAG ATCCACAGAA TACTACAGAG 
ATGGCAGGGG AGAAAGGAGA CACAGGCGAG CGAGGACTCC ATGGGAAATC TGGCACATCA 
GGAAAAAATG GACCCAGAGG GCCCCATGGT GTAAAGGGAA CCAAAGGCAG CGTCGGTGCT 
CCTGGAGAAT CCTGTAAGTC CTACTACGCT GCATTCTCTG TGGGCCGCAA GAAAGCCCTG 
CACAGTAACG ATTACTACCA GACCATGATC TTCGACACAG AGTTTGTCAA CCTGTATGGC 
CACTTCAACA TGTTCACCGG CAAGTTCTTC TGCTATATCC CCGGCATCTA TTTCTTCAGT 
TTAAATGCAC ACAGTTGGAA CCAGAAAGAA ACGTACTTGC ACCTAATGAA GAATGAGCAG 
GAGATGGCCA TTCTGTATGC TCAGCCCAGC GATCGCTCCA TCATGCAGAG CCAGAGCCTC 
ATGCTGGAGC TGGAGAGGGA CGATCAGGTT TGGGTTCGTC TCTTCAAGGG TGAGAGAGAG 
AATGCTGTGT TCAGTGATGA CTTTGACACC TACATCACGT TTAGTGGTTA CCTTGTCAAG 
GCAAAGTCGG AAGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

c1qtnf1 ( XM_021480107.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021335782.1 Danio rerio C1q and TNF related 1 (c1qtnf1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa54456
Clone ID Related Accession (Same CDS sequence)	XM_017358459.1 , XM_021480107.1
Accession Version	XM_021480107.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	complement C1q tumor necrosis factor-related protein 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGAGCA AGACCCATAT GAACCCAAAG ATAATCGGAG ATCCACAGAA TACTACAGAG 
ATGGCAGGGG AGAAAGGAGA CACAGGCGAG CGAGGACTCC ATGGGAAATC TGGCACATCA 
GGAAAAAATG GACCCAGAGG GCCCCATGGT GTAAAGGGAA CCAAAGGCAG CGTCGGTGCT 
CCTGGAGAAT CCTGTAAGTC CTACTACGCT GCATTCTCTG TGGGCCGCAA GAAAGCCCTG 
CACAGTAACG ATTACTACCA GACCATGATC TTCGACACAG AGTTTGTCAA CCTGTATGGC 
CACTTCAACA TGTTCACCGG CAAGTTCTTC TGCTATATCC CCGGCATCTA TTTCTTCAGT 
TTAAATGCAC ACAGTTGGAA CCAGAAAGAA ACGTACTTGC ACCTAATGAA GAATGAGCAG 
GAGATGGCCA TTCTGTATGC TCAGCCCAGC GATCGCTCCA TCATGCAGAG CCAGAGCCTC 
ATGCTGGAGC TGGAGAGGGA CGATCAGGTT TGGGTTCGTC TCTTCAAGGG TGAGAGAGAG 
AATGCTGTGT TCAGTGATGA CTTTGACACC TACATCACGT TTAGTGGTTA CCTTGTCAAG 
GCAAAGTCGG AAGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021335782.1
CDS	353..970
Translation	MESKTHMNPKIIGDPQNTTEMAGEKGDTGERGLHGKSGTSGKNGPRGPHGVKGTKGSVGAPGESCKSYYAAFSVGRKKALHSNDYYQTMIFDTEFVNLYGHFNMFTGKFFCYIPGIYFFSLNAHSWNQKETYLHLMKNEQEMAILYAQPSDRSIMQSQSLMLELERDDQVWVRLFKGERENAVFSDDFDTYITFSGYLVKAKSEG

Target ORF information:

RefSeq Version	XM_021480107.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio C1q and TNF related 1 (c1qtnf1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021480107.1

ORF Insert Sequence:

ATGGAGAGCA AGACCCATAT GAACCCAAAG ATAATCGGAG ATCCACAGAA TACTACAGAG 
ATGGCAGGGG AGAAAGGAGA CACAGGCGAG CGAGGACTCC ATGGGAAATC TGGCACATCA 
GGAAAAAATG GACCCAGAGG GCCCCATGGT GTAAAGGGAA CCAAAGGCAG CGTCGGTGCT 
CCTGGAGAAT CCTGTAAGTC CTACTACGCT GCATTCTCTG TGGGCCGCAA GAAAGCCCTG 
CACAGTAACG ATTACTACCA GACCATGATC TTCGACACAG AGTTTGTCAA CCTGTATGGC 
CACTTCAACA TGTTCACCGG CAAGTTCTTC TGCTATATCC CCGGCATCTA TTTCTTCAGT 
TTAAATGCAC ACAGTTGGAA CCAGAAAGAA ACGTACTTGC ACCTAATGAA GAATGAGCAG 
GAGATGGCCA TTCTGTATGC TCAGCCCAGC GATCGCTCCA TCATGCAGAG CCAGAGCCTC 
ATGCTGGAGC TGGAGAGGGA CGATCAGGTT TGGGTTCGTC TCTTCAAGGG TGAGAGAGAG 
AATGCTGTGT TCAGTGATGA CTTTGACACC TACATCACGT TTAGTGGTTA CCTTGTCAAG 
GCAAAGTCGG AAGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Zebrafish akt2 is essential for survival, growth, bone development, and glucose homeostasis.
Mechanisms of development14342-52(2017 Feb)
Zhang D,Wang J,Zhou C,Xiao W

Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and mammalian lung.
PloS one6(8)e24019(2011)
Zheng W,Wang Z,Collins JE,Andrews RM,Stemple D,Gong Z

Characterization of C1q in teleosts: insight into the molecular and functional evolution of C1q family and classical pathway.
The Journal of biological chemistry285(37)28777-86(2010 Sep)
Hu YL,Pan XM,Xiang LX,Shao JZ

Bioinformatic identification of genes encoding C1q-domain-containing proteins in zebrafish.
Journal of genetics and genomics = Yi chuan xue bao35(1)17-24(2008 Jan)
Mei J,Gui J